Strain Fitness in Rahnella sp. WP5 around EX31_RS15880

Experiment: L-Serine (N); ShewMM media; shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N); ShewMM media; shaking
31,695	+				-3.0
31,695	+				-2.4
31,695	+				-3.4
31,695	+				-3.1
31,718	+				-1.7
31,718	+				-0.3
31,718	+				-3.6
31,718	+				-3.3
31,718	+				-3.1
31,719	-				-2.7
31,719	-				-1.6
31,744	-		EX31_RS15875	0.11	-2.1
31,800	-		EX31_RS15875	0.16	-2.2
31,821	+		EX31_RS15875	0.18	-2.8
31,822	-		EX31_RS15875	0.18	-3.6
31,822	-		EX31_RS15875	0.18	-2.3
31,882	-		EX31_RS15875	0.24	-1.1
31,992	+		EX31_RS15875	0.35	-1.5
31,993	-		EX31_RS15875	0.35	-3.3
31,993	-		EX31_RS15875	0.35	-2.1
31,993	-		EX31_RS15875	0.35	-1.9
32,088	+		EX31_RS15875	0.44	-2.6
32,088	+		EX31_RS15875	0.44	-2.0
32,088	+		EX31_RS15875	0.44	-2.3
32,088	+		EX31_RS15875	0.44	-2.4
32,088	+		EX31_RS15875	0.44	-2.4
32,088	+		EX31_RS15875	0.44	-1.8
32,088	+		EX31_RS15875	0.44	-2.4
32,088	+		EX31_RS15875	0.44	-0.6
32,089	-		EX31_RS15875	0.44	-2.5
32,089	-		EX31_RS15875	0.44	-3.5
32,089	-		EX31_RS15875	0.44	-0.8
32,089	-		EX31_RS15875	0.44	-1.5
32,128	+		EX31_RS15875	0.48	-3.0
32,128	+		EX31_RS15875	0.48	-2.6
32,129	-		EX31_RS15875	0.48	-2.2
32,129	-		EX31_RS15875	0.48	-2.9
32,129	-		EX31_RS15875	0.48	-1.6
32,129	-		EX31_RS15875	0.48	-1.8
32,129	-		EX31_RS15875	0.48	-3.3
32,140	+		EX31_RS15875	0.49	-2.9
32,141	-		EX31_RS15875	0.49	-0.8
32,221	+		EX31_RS15875	0.56	-0.4
32,221	+		EX31_RS15875	0.56	-3.4
32,221	+		EX31_RS15875	0.56	-1.8
32,221	+		EX31_RS15875	0.56	-3.2
32,221	+		EX31_RS15875	0.56	-0.6
32,221	+		EX31_RS15875	0.56	-2.2
32,221	+		EX31_RS15875	0.56	-2.1
32,222	-		EX31_RS15875	0.57	-2.7
32,222	-		EX31_RS15875	0.57	-3.5
32,297	+		EX31_RS15875	0.64	-1.8
32,297	+		EX31_RS15875	0.64	-2.7
32,297	+		EX31_RS15875	0.64	-2.2
32,298	-		EX31_RS15875	0.64	-0.3
32,298	-		EX31_RS15875	0.64	-3.0
32,298	-		EX31_RS15875	0.64	-2.0
32,340	+		EX31_RS15875	0.68	-1.2
32,340	+		EX31_RS15875	0.68	-1.1
32,340	+		EX31_RS15875	0.68	-2.8
32,340	+		EX31_RS15875	0.68	-1.6
32,340	+		EX31_RS15875	0.68	-2.0
32,340	+		EX31_RS15875	0.68	-2.0
32,355	+		EX31_RS15875	0.69	-0.8
32,376	+		EX31_RS15875	0.71	-1.8
32,407	+		EX31_RS15875	0.74	-3.6
32,407	+		EX31_RS15875	0.74	-1.3
32,407	+		EX31_RS15875	0.74	-2.4
32,407	+		EX31_RS15875	0.74	-1.8
32,407	+		EX31_RS15875	0.74	-1.7
32,407	+		EX31_RS15875	0.74	-2.9
32,407	+		EX31_RS15875	0.74	-3.8
32,408	-		EX31_RS15875	0.74	-1.1
32,408	-		EX31_RS15875	0.74	+1.3
32,408	-		EX31_RS15875	0.74	-2.8
32,408	-		EX31_RS15875	0.74	-2.8
32,408	-		EX31_RS15875	0.74	-2.1
32,408	-		EX31_RS15875	0.74	-4.1
32,412	+		EX31_RS15875	0.75	-2.9
32,413	-		EX31_RS15875	0.75	-1.3
32,422	+		EX31_RS15875	0.76	-2.4
32,422	+		EX31_RS15875	0.76	-3.3
32,437	+		EX31_RS15875	0.77	-1.9
32,437	+		EX31_RS15875	0.77	-0.9
32,437	+		EX31_RS15875	0.77	-2.0
32,437	+		EX31_RS15875	0.77	-2.8
32,437	+		EX31_RS15875	0.77	-3.6
32,438	-		EX31_RS15875	0.77	-3.0
32,438	-		EX31_RS15875	0.77	-1.4
32,442	+		EX31_RS15875	0.78	-3.8
32,442	+		EX31_RS15875	0.78	-2.1
32,443	-		EX31_RS15875	0.78	-3.1
32,443	-		EX31_RS15875	0.78	-1.4
32,624	-				-3.5
32,684	+				-0.9
32,684	+				-3.1
32,684	+				-2.8
32,684	+				-1.3
32,684	+				+1.6
32,684	+				+1.0
32,684	+				-2.0
32,685	-				-3.2
32,685	-				-1.0
32,699	-				-2.4
32,720	+				-2.6
32,721	-				-3.1
32,721	-				+1.0
32,738	-				-2.8
32,846	+		EX31_RS15880	0.11	+0.4
32,881	+		EX31_RS15880	0.14	-0.3
32,882	-		EX31_RS15880	0.14	-3.0
32,882	-		EX31_RS15880	0.14	-2.1
32,892	-		EX31_RS15880	0.15	-2.9
32,923	+		EX31_RS15880	0.17	-2.0
32,923	+		EX31_RS15880	0.17	-2.1
32,924	-		EX31_RS15880	0.17	-1.8
32,964	+		EX31_RS15880	0.20	-3.4
32,964	+		EX31_RS15880	0.20	-2.3
32,964	+		EX31_RS15880	0.20	-2.4
33,136	+		EX31_RS15880	0.32	-2.4
33,185	+		EX31_RS15880	0.35	-2.7
33,185	+		EX31_RS15880	0.35	-2.9
33,185	+		EX31_RS15880	0.35	-1.6
33,229	+		EX31_RS15880	0.38	-2.4
33,229	+		EX31_RS15880	0.38	-2.3
33,230	-		EX31_RS15880	0.39	-0.7
33,230	-		EX31_RS15880	0.39	-2.7
33,276	-		EX31_RS15880	0.42	-2.9
33,314	-		EX31_RS15880	0.45	-2.3
33,416	+		EX31_RS15880	0.52	-4.4
33,417	-		EX31_RS15880	0.52	-2.9
33,472	-		EX31_RS15880	0.56	-0.0
33,472	-		EX31_RS15880	0.56	-0.8
33,512	+		EX31_RS15880	0.59	-2.1
33,512	+		EX31_RS15880	0.59	-4.0
33,512	+		EX31_RS15880	0.59	-1.0
33,513	-		EX31_RS15880	0.59	-2.7
33,513	-		EX31_RS15880	0.59	-2.5
33,513	-		EX31_RS15880	0.59	-2.6
33,516	-		EX31_RS15880	0.59	-2.7
33,545	-		EX31_RS15880	0.61	-1.0
33,577	+		EX31_RS15880	0.63	-3.5
33,577	+		EX31_RS15880	0.63	-2.6
33,829	+		EX31_RS15880	0.81	-0.4
33,980	+				-2.2
33,980	+				-1.0
33,980	+				-1.1
33,980	+				-2.8
33,980	+				-2.2
33,980	+				-2.9
33,980	+				-2.0
33,980	+				-3.5
33,980	+				-2.6
33,980	+				-0.6
33,980	+				-1.2
33,980	+				-3.3
33,980	+				-3.1
33,980	+				-1.8
33,980	+				-1.6
33,980	+				-2.4
33,980	+				-1.9
33,981	-				-2.1
33,981	-				-2.0
33,981	-				-2.1
33,981	-				-0.4
33,981	-				-3.3
33,981	-				-0.4
33,981	-				-0.8
33,986	-				-1.8
33,986	-				-1.8
33,986	-				-0.8
33,986	-				-1.6
34,019	+				-0.9
34,019	+				-1.7
34,019	+				-0.6
34,019	+				-2.3
34,019	+				-0.8
34,020	-				-1.4
34,020	-				+0.2
34,020	-				-0.9
34,059	-				-3.1
34,095	+				+0.4
34,130	+				+0.9
34,130	+				+1.0
34,131	-				+0.5
34,144	+				-0.3
34,208	+				-0.6
34,208	+				+1.7
34,209	-				-1.6
34,212	+				+1.1
34,212	+				+0.6
34,212	+				-0.1
34,213	-				-0.7
34,213	-				-0.5
34,224	+				+2.1
34,224	+				-0.4
34,224	+				-0.1
34,224	+				+0.9
34,225	-				+0.2
34,225	-				+0.2
34,225	-				-0.8
34,225	-				+1.3
34,225	-				+0.2
34,225	-				+0.2
34,225	-				+0.5
34,225	-				-1.4
34,225	-				-0.3
34,225	-				+0.0
34,225	-				-0.1
34,230	+				+0.9
34,230	+				-0.4
34,230	+				+0.3
34,230	+				-0.1
34,230	+				-0.6
34,230	+				+1.0
34,231	-				+0.4
34,231	-				-0.7
34,231	-				-1.4
34,231	-				+0.6
34,233	+				-0.3
34,233	+				-0.4
34,234	-				+0.5
34,234	-				+0.5
34,234	-				+0.2
34,269	+				-0.7
34,269	+				-0.5
34,269	+				-0.3
34,269	+				+0.1
34,270	-				+1.6
34,270	-				-0.1
34,270	-				+0.1
34,270	-				+0.7
34,270	-				-0.2
34,340	+		EX31_RS15885	0.13	+0.8
34,362	-		EX31_RS15885	0.15	+0.0
34,374	+		EX31_RS15885	0.15	+0.6
34,413	+		EX31_RS15885	0.18	+0.2
34,413	+		EX31_RS15885	0.18	+0.5
34,413	+		EX31_RS15885	0.18	+0.6
34,413	+		EX31_RS15885	0.18	-0.0
34,413	+		EX31_RS15885	0.18	+0.3
34,414	-		EX31_RS15885	0.18	-0.2
34,414	-		EX31_RS15885	0.18	+0.2
34,465	+		EX31_RS15885	0.22	-1.6
34,466	-		EX31_RS15885	0.22	+0.0
34,496	+		EX31_RS15885	0.24	-1.0
34,496	+		EX31_RS15885	0.24	-0.3
34,496	+		EX31_RS15885	0.24	+1.2
34,497	-		EX31_RS15885	0.24	-0.4
34,497	-		EX31_RS15885	0.24	-2.8
34,497	-		EX31_RS15885	0.24	+0.2
34,499	+		EX31_RS15885	0.25	-0.1
34,500	-		EX31_RS15885	0.25	-0.0
34,500	-		EX31_RS15885	0.25	+1.0
34,529	+		EX31_RS15885	0.27	-0.3
34,530	-		EX31_RS15885	0.27	+0.4
34,530	-		EX31_RS15885	0.27	+0.4
34,598	+		EX31_RS15885	0.32	+1.2
34,598	+		EX31_RS15885	0.32	+0.6
34,598	+		EX31_RS15885	0.32	+0.1
34,598	+		EX31_RS15885	0.32	+0.5
34,598	+		EX31_RS15885	0.32	+2.1
34,598	+		EX31_RS15885	0.32	+0.2
34,599	-		EX31_RS15885	0.32	+0.2
34,611	+		EX31_RS15885	0.33	+0.0
34,612	-		EX31_RS15885	0.33	-0.1
34,612	-		EX31_RS15885	0.33	+0.6
34,811	+		EX31_RS15885	0.47	-0.3
34,811	+		EX31_RS15885	0.47	-0.4
34,812	-		EX31_RS15885	0.47	+0.8
34,865	+		EX31_RS15885	0.51	-0.6
34,865	+		EX31_RS15885	0.51	-0.2
34,866	-		EX31_RS15885	0.51	-0.6
34,902	-		EX31_RS15885	0.54	+4.9
34,914	+		EX31_RS15885	0.55	+0.0
34,915	-		EX31_RS15885	0.55	-0.9
34,917	+		EX31_RS15885	0.55	-0.6
34,917	+		EX31_RS15885	0.55	+0.9
34,918	-		EX31_RS15885	0.55	+0.2
35,031	+		EX31_RS15885	0.63	-0.4
35,031	+		EX31_RS15885	0.63	+0.0