Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_01725 and CCNA_01726 are separated by 125 nucleotides CCNA_01726 and CCNA_01727 are separated by 78 nucleotides
CCNA_01725: CCNA_01725 - beta-barrel assembly machine (BAM) protein BamB, at 1,851,328 to 1,852,758
_01725
CCNA_01726: CCNA_01726 - EngA-subfamily GTPase protein, at 1,852,884 to 1,854,650
_01726
CCNA_01727: CCNA_01727 - methyl-accepting chemotaxis protein, at 1,854,729 to 1,856,234
_01727
Position (kb)
1852
1853
1854
1855 Strain fitness (log2 ratio)
-1
0
1
2 at 1852.863 kb on + strand at 1852.888 kb on - strand at 1854.491 kb on + strand at 1854.499 kb on - strand at 1854.547 kb on + strand at 1854.644 kb on + strand at 1854.644 kb on + strand at 1854.644 kb on + strand at 1854.644 kb on + strand at 1854.644 kb on + strand at 1854.775 kb on + strand at 1854.783 kb on - strand at 1854.817 kb on + strand at 1854.830 kb on - strand at 1854.847 kb on - strand at 1854.860 kb on + strand at 1854.888 kb on + strand, within CCNA_01727 at 1854.888 kb on - strand, within CCNA_01727 at 1854.909 kb on + strand, within CCNA_01727 at 1854.943 kb on + strand, within CCNA_01727 at 1855.014 kb on - strand, within CCNA_01727 at 1855.025 kb on - strand, within CCNA_01727 at 1855.076 kb on - strand, within CCNA_01727 at 1855.149 kb on - strand, within CCNA_01727 at 1855.193 kb on + strand, within CCNA_01727 at 1855.216 kb on + strand, within CCNA_01727 at 1855.226 kb on + strand, within CCNA_01727 at 1855.302 kb on - strand, within CCNA_01727 at 1855.360 kb on - strand, within CCNA_01727 at 1855.520 kb on + strand, within CCNA_01727 at 1855.528 kb on - strand, within CCNA_01727 at 1855.528 kb on - strand, within CCNA_01727 at 1855.601 kb on - strand, within CCNA_01727 at 1855.647 kb on + strand, within CCNA_01727
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,852,863 + +1.4 1,852,888 - +1.2 1,854,491 + +1.5 1,854,499 - +0.6 1,854,547 + +1.5 1,854,644 + +0.5 1,854,644 + +1.9 1,854,644 + +1.5 1,854,644 + +2.0 1,854,644 + +1.0 1,854,775 + +1.1 1,854,783 - +1.6 1,854,817 + +1.0 1,854,830 - +0.9 1,854,847 - +0.8 1,854,860 + +1.3 1,854,888 + CCNA_01727 0.11 +0.1 1,854,888 - CCNA_01727 0.11 +1.0 1,854,909 + CCNA_01727 0.12 +1.0 1,854,943 + CCNA_01727 0.14 +2.1 1,855,014 - CCNA_01727 0.19 +1.1 1,855,025 - CCNA_01727 0.20 +1.0 1,855,076 - CCNA_01727 0.23 -0.2 1,855,149 - CCNA_01727 0.28 +0.3 1,855,193 + CCNA_01727 0.31 +0.5 1,855,216 + CCNA_01727 0.32 +1.0 1,855,226 + CCNA_01727 0.33 +1.4 1,855,302 - CCNA_01727 0.38 +1.0 1,855,360 - CCNA_01727 0.42 +1.3 1,855,520 + CCNA_01727 0.53 +1.5 1,855,528 - CCNA_01727 0.53 +1.4 1,855,528 - CCNA_01727 0.53 +1.3 1,855,601 - CCNA_01727 0.58 +0.9 1,855,647 + CCNA_01727 0.61 -0.3
Or see this region's nucleotide sequence