Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS02020

Experiment: R2A with nitrite 6 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA265_RS02015 and CA265_RS02020 are separated by 130 nucleotidesCA265_RS02020 and CA265_RS02025 are separated by 166 nucleotides CA265_RS02015: CA265_RS02015 - cell division protein FtsA, at 510,689 to 512,047 _RS02015 CA265_RS02020: CA265_RS02020 - cell division protein FtsZ, at 512,178 to 513,809 _RS02020 CA265_RS02025: CA265_RS02025 - 8-amino-7-oxononanoate synthase, at 513,976 to 515,217 _RS02025 Position (kb) 512 513 514Strain fitness (log2 ratio) -1 0 1at 513.669 kb on + strandat 513.910 kb on + strandat 513.911 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with nitrite 6 mM
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513,669 + +1.4
513,910 + +1.1
513,911 - -0.5

Or see this region's nucleotide sequence