Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS33305 and AZOBR_RS33310 are separated by 7 nucleotides AZOBR_RS33310 and AZOBR_RS33315 are separated by 83 nucleotides AZOBR_RS33315 and AZOBR_RS33320 are separated by 151 nucleotides AZOBR_RS33320 and AZOBR_RS33325 are separated by 3 nucleotides
AZOBR_RS33305: AZOBR_RS33305 - hypothetical protein, at 164,792 to 165,361
_RS33305
AZOBR_RS33310: AZOBR_RS33310 - hypothetical protein, at 165,369 to 165,809
_RS33310
AZOBR_RS33315: AZOBR_RS33315 - hypothetical protein, at 165,893 to 166,873
_RS33315
AZOBR_RS33320: AZOBR_RS33320 - hypothetical protein, at 167,025 to 167,465
_RS33320
AZOBR_RS33325: AZOBR_RS33325 - hypothetical protein, at 167,469 to 167,954
_RS33325
Position (kb) 165
166
167 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 165.120 kb on - strand, within AZOBR_RS33305 at 165.120 kb on - strand, within AZOBR_RS33305 at 165.275 kb on + strand, within AZOBR_RS33305 at 165.275 kb on + strand, within AZOBR_RS33305 at 165.276 kb on - strand, within AZOBR_RS33305 at 165.507 kb on + strand, within AZOBR_RS33310 at 165.624 kb on + strand, within AZOBR_RS33310 at 166.043 kb on + strand, within AZOBR_RS33315 at 166.358 kb on + strand at 166.358 kb on + strand, within AZOBR_RS33315 at 166.358 kb on + strand, within AZOBR_RS33315 at 166.359 kb on - strand, within AZOBR_RS33315 at 166.359 kb on - strand, within AZOBR_RS33315 at 166.454 kb on + strand, within AZOBR_RS33315 at 166.454 kb on + strand, within AZOBR_RS33315 at 166.454 kb on + strand, within AZOBR_RS33315 at 166.454 kb on + strand, within AZOBR_RS33315 at 166.454 kb on + strand, within AZOBR_RS33315 at 166.455 kb on - strand, within AZOBR_RS33315 at 166.455 kb on - strand, within AZOBR_RS33315 at 166.455 kb on - strand, within AZOBR_RS33315 at 166.455 kb on - strand, within AZOBR_RS33315 at 166.475 kb on - strand, within AZOBR_RS33315 at 166.542 kb on - strand, within AZOBR_RS33315 at 166.542 kb on - strand, within AZOBR_RS33315 at 166.568 kb on + strand, within AZOBR_RS33315 at 166.572 kb on - strand, within AZOBR_RS33315 at 166.572 kb on - strand, within AZOBR_RS33315 at 166.909 kb on + strand at 166.914 kb on - strand at 166.947 kb on + strand at 166.947 kb on + strand at 166.948 kb on - strand at 166.997 kb on + strand at 167.166 kb on + strand, within AZOBR_RS33320 at 167.311 kb on - strand, within AZOBR_RS33320 at 167.463 kb on + strand at 167.464 kb on - strand at 167.586 kb on + strand, within AZOBR_RS33325 at 167.586 kb on + strand, within AZOBR_RS33325 at 167.775 kb on + strand, within AZOBR_RS33325
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 165,120 - AZOBR_RS33305 0.58 +0.3 165,120 - AZOBR_RS33305 0.58 +0.6 165,275 + AZOBR_RS33305 0.85 -1.3 165,275 + AZOBR_RS33305 0.85 -0.0 165,276 - AZOBR_RS33305 0.85 -0.2 165,507 + AZOBR_RS33310 0.31 +0.3 165,624 + AZOBR_RS33310 0.58 +0.1 166,043 + AZOBR_RS33315 0.15 -2.3 166,358 + -0.6 166,358 + AZOBR_RS33315 0.47 -1.8 166,358 + AZOBR_RS33315 0.47 -3.5 166,359 - AZOBR_RS33315 0.48 -3.4 166,359 - AZOBR_RS33315 0.48 -2.9 166,454 + AZOBR_RS33315 0.57 -2.4 166,454 + AZOBR_RS33315 0.57 -0.6 166,454 + AZOBR_RS33315 0.57 -1.6 166,454 + AZOBR_RS33315 0.57 -3.6 166,454 + AZOBR_RS33315 0.57 -4.7 166,455 - AZOBR_RS33315 0.57 -2.0 166,455 - AZOBR_RS33315 0.57 -4.2 166,455 - AZOBR_RS33315 0.57 -4.9 166,455 - AZOBR_RS33315 0.57 -3.6 166,475 - AZOBR_RS33315 0.59 -1.5 166,542 - AZOBR_RS33315 0.66 -2.9 166,542 - AZOBR_RS33315 0.66 -3.0 166,568 + AZOBR_RS33315 0.69 +0.0 166,572 - AZOBR_RS33315 0.69 -5.3 166,572 - AZOBR_RS33315 0.69 -1.3 166,909 + +0.1 166,914 - +0.1 166,947 + -0.4 166,947 + -0.5 166,948 - +0.4 166,997 + -0.6 167,166 + AZOBR_RS33320 0.32 -0.1 167,311 - AZOBR_RS33320 0.65 -0.7 167,463 + +0.6 167,464 - -0.1 167,586 + AZOBR_RS33325 0.24 -0.3 167,586 + AZOBR_RS33325 0.24 -1.9 167,775 + AZOBR_RS33325 0.63 -0.1
Or see this region's nucleotide sequence