Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25380 and AZOBR_RS25385 overlap by 56 nucleotides AZOBR_RS25385 and AZOBR_RS25390 are separated by 675 nucleotides
AZOBR_RS25380: AZOBR_RS25380 - aminotransferase class V, at 748,346 to 750,238
_RS25380
AZOBR_RS25385: AZOBR_RS25385 - membrane protein, at 750,183 to 751,112
_RS25385
AZOBR_RS25390: AZOBR_RS25390 - transcriptional regulator, at 751,788 to 752,339
_RS25390
Position (kb) 750
751
752 Strain fitness (log2 ratio) -2
-1
0
1 at 749.374 kb on - strand, within AZOBR_RS25380 at 749.439 kb on + strand, within AZOBR_RS25380 at 749.440 kb on - strand, within AZOBR_RS25380 at 749.440 kb on - strand, within AZOBR_RS25380 at 749.775 kb on + strand, within AZOBR_RS25380 at 749.775 kb on + strand, within AZOBR_RS25380 at 749.776 kb on - strand, within AZOBR_RS25380 at 750.190 kb on + strand at 750.191 kb on - strand at 750.191 kb on - strand at 750.191 kb on - strand at 750.191 kb on - strand at 750.191 kb on - strand at 750.196 kb on + strand at 750.196 kb on + strand at 750.196 kb on + strand at 750.196 kb on + strand at 750.197 kb on - strand at 750.197 kb on - strand at 750.197 kb on - strand at 750.197 kb on - strand at 750.197 kb on - strand at 750.197 kb on - strand at 750.197 kb on - strand at 750.199 kb on + strand at 750.199 kb on + strand at 750.199 kb on + strand at 750.200 kb on - strand at 750.200 kb on - strand at 750.200 kb on - strand at 750.200 kb on - strand at 750.200 kb on - strand at 750.200 kb on - strand at 750.265 kb on + strand at 750.265 kb on + strand at 750.266 kb on - strand at 750.266 kb on - strand at 750.280 kb on + strand, within AZOBR_RS25385 at 750.281 kb on - strand, within AZOBR_RS25385 at 750.841 kb on + strand, within AZOBR_RS25385 at 750.961 kb on + strand, within AZOBR_RS25385 at 750.961 kb on + strand, within AZOBR_RS25385 at 751.017 kb on + strand, within AZOBR_RS25385 at 751.018 kb on - strand, within AZOBR_RS25385 at 751.298 kb on + strand at 751.299 kb on - strand at 751.365 kb on + strand at 751.368 kb on - strand at 751.692 kb on - strand at 751.814 kb on - strand at 751.814 kb on - strand at 751.814 kb on - strand at 751.814 kb on - strand at 751.930 kb on + strand, within AZOBR_RS25390 at 751.931 kb on - strand, within AZOBR_RS25390 at 751.931 kb on - strand, within AZOBR_RS25390
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 749,374 - AZOBR_RS25380 0.54 -0.0 749,439 + AZOBR_RS25380 0.58 -0.6 749,440 - AZOBR_RS25380 0.58 +0.8 749,440 - AZOBR_RS25380 0.58 +0.0 749,775 + AZOBR_RS25380 0.75 +0.6 749,775 + AZOBR_RS25380 0.75 +0.3 749,776 - AZOBR_RS25380 0.76 +0.5 750,190 + -0.6 750,191 - +0.2 750,191 - -0.2 750,191 - -0.4 750,191 - +0.1 750,191 - +0.3 750,196 + +0.2 750,196 + +0.5 750,196 + -0.5 750,196 + +1.3 750,197 - -0.1 750,197 - +0.2 750,197 - -0.2 750,197 - -0.2 750,197 - +0.2 750,197 - -1.8 750,197 - -0.4 750,199 + -0.3 750,199 + +0.3 750,199 + +1.1 750,200 - +0.0 750,200 - -0.6 750,200 - -0.9 750,200 - -0.1 750,200 - +0.6 750,200 - -0.1 750,265 + -0.4 750,265 + -0.1 750,266 - +0.2 750,266 - -1.1 750,280 + AZOBR_RS25385 0.10 -0.2 750,281 - AZOBR_RS25385 0.11 -2.4 750,841 + AZOBR_RS25385 0.71 -1.2 750,961 + AZOBR_RS25385 0.84 -0.9 750,961 + AZOBR_RS25385 0.84 -0.2 751,017 + AZOBR_RS25385 0.90 -0.1 751,018 - AZOBR_RS25385 0.90 +0.6 751,298 + -0.1 751,299 - +0.4 751,365 + -1.0 751,368 - -1.0 751,692 - +0.1 751,814 - +1.3 751,814 - +0.0 751,814 - +0.1 751,814 - -0.6 751,930 + AZOBR_RS25390 0.26 +0.0 751,931 - AZOBR_RS25390 0.26 +0.1 751,931 - AZOBR_RS25390 0.26 -0.4
Or see this region's nucleotide sequence