Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17975 and AZOBR_RS17980 are separated by 262 nucleotides
AZOBR_RS17975: AZOBR_RS17975 - hypothetical protein, at 792,922 to 793,413
_RS17975
AZOBR_RS17980: AZOBR_RS17980 - LysR family transcriptional regulator, at 793,676 to 794,614
_RS17980
Position (kb) 793
794
795 Strain fitness (log2 ratio) -2
-1
0
1 at 792.860 kb on + strand at 792.860 kb on + strand at 792.860 kb on + strand at 792.860 kb on + strand at 792.860 kb on + strand at 792.860 kb on + strand at 792.860 kb on + strand at 792.860 kb on + strand at 792.860 kb on + strand at 792.860 kb on + strand at 792.860 kb on + strand at 792.861 kb on - strand at 792.861 kb on - strand at 792.861 kb on - strand at 792.861 kb on - strand at 792.861 kb on - strand at 792.861 kb on - strand at 792.861 kb on - strand at 792.861 kb on - strand at 792.982 kb on - strand, within AZOBR_RS17975 at 793.063 kb on + strand, within AZOBR_RS17975 at 793.063 kb on + strand, within AZOBR_RS17975 at 793.063 kb on + strand, within AZOBR_RS17975 at 793.063 kb on + strand, within AZOBR_RS17975 at 793.063 kb on + strand, within AZOBR_RS17975 at 793.064 kb on - strand, within AZOBR_RS17975 at 793.064 kb on - strand, within AZOBR_RS17975 at 793.064 kb on - strand, within AZOBR_RS17975 at 793.064 kb on - strand, within AZOBR_RS17975 at 793.064 kb on - strand, within AZOBR_RS17975 at 793.064 kb on - strand, within AZOBR_RS17975 at 793.282 kb on + strand, within AZOBR_RS17975 at 793.282 kb on + strand, within AZOBR_RS17975 at 793.283 kb on - strand, within AZOBR_RS17975 at 793.283 kb on - strand, within AZOBR_RS17975 at 793.283 kb on - strand, within AZOBR_RS17975 at 793.390 kb on + strand at 793.390 kb on + strand at 793.391 kb on - strand at 793.400 kb on + strand at 793.400 kb on + strand at 793.400 kb on + strand at 793.401 kb on - strand at 793.401 kb on - strand at 793.491 kb on + strand at 793.492 kb on - strand at 793.498 kb on + strand at 793.498 kb on + strand at 793.551 kb on - strand at 793.560 kb on - strand at 793.598 kb on + strand at 793.598 kb on + strand at 793.599 kb on - strand at 793.604 kb on - strand at 793.642 kb on + strand at 793.642 kb on + strand at 793.643 kb on - strand at 793.643 kb on - strand at 793.650 kb on - strand at 793.698 kb on + strand at 793.698 kb on + strand at 793.699 kb on - strand at 794.049 kb on + strand, within AZOBR_RS17980 at 794.050 kb on - strand, within AZOBR_RS17980 at 794.289 kb on + strand, within AZOBR_RS17980 at 794.627 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 792,860 + -1.1 792,860 + -0.4 792,860 + -0.5 792,860 + -0.1 792,860 + +0.9 792,860 + +0.5 792,860 + +0.0 792,860 + -0.0 792,860 + +0.3 792,860 + -0.3 792,860 + -0.4 792,861 - -0.5 792,861 - -0.5 792,861 - -0.3 792,861 - +0.6 792,861 - +0.3 792,861 - -0.5 792,861 - +0.0 792,861 - -0.1 792,982 - AZOBR_RS17975 0.12 -1.0 793,063 + AZOBR_RS17975 0.29 +0.1 793,063 + AZOBR_RS17975 0.29 +0.3 793,063 + AZOBR_RS17975 0.29 -0.8 793,063 + AZOBR_RS17975 0.29 +0.4 793,063 + AZOBR_RS17975 0.29 -0.1 793,064 - AZOBR_RS17975 0.29 -1.0 793,064 - AZOBR_RS17975 0.29 -0.1 793,064 - AZOBR_RS17975 0.29 -0.3 793,064 - AZOBR_RS17975 0.29 -0.6 793,064 - AZOBR_RS17975 0.29 -2.4 793,064 - AZOBR_RS17975 0.29 -1.8 793,282 + AZOBR_RS17975 0.73 -0.2 793,282 + AZOBR_RS17975 0.73 -0.8 793,283 - AZOBR_RS17975 0.73 -0.4 793,283 - AZOBR_RS17975 0.73 -0.2 793,283 - AZOBR_RS17975 0.73 -0.5 793,390 + -0.1 793,390 + +0.7 793,391 - +0.9 793,400 + -0.2 793,400 + -0.7 793,400 + +0.4 793,401 - -0.1 793,401 - -1.6 793,491 + -0.1 793,492 - -0.4 793,498 + +0.3 793,498 + +0.6 793,551 - +0.1 793,560 - +0.7 793,598 + -0.1 793,598 + +0.2 793,599 - +0.2 793,604 - +0.6 793,642 + +0.5 793,642 + +0.1 793,643 - +0.2 793,643 - +0.5 793,650 - +0.0 793,698 + +0.8 793,698 + +0.1 793,699 - -0.1 794,049 + AZOBR_RS17980 0.40 -0.7 794,050 - AZOBR_RS17980 0.40 -0.4 794,289 + AZOBR_RS17980 0.65 -0.5 794,627 + +0.0
Or see this region's nucleotide sequence