Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01340 and AZOBR_RS01345 are separated by 199 nucleotides AZOBR_RS01345 and AZOBR_RS01350 are separated by 137 nucleotides AZOBR_RS01350 and AZOBR_RS01355 are separated by 229 nucleotides
AZOBR_RS01340: AZOBR_RS01340 - rubrerythrin, at 278,923 to 279,342
_RS01340
AZOBR_RS01345: AZOBR_RS01345 - Fur family transcriptional regulator, at 279,542 to 279,973
_RS01345
AZOBR_RS01350: AZOBR_RS01350 - 2-nitropropane dioxygenase, at 280,111 to 281,508
_RS01350
AZOBR_RS01355: AZOBR_RS01355 - glycerophosphoryl diester phosphodiesterase, at 281,738 to 282,487
_RS01355
Position (kb) 280
281
282 Strain fitness (log2 ratio) -1
0
1
2
3 at 279.260 kb on + strand, within AZOBR_RS01340 at 279.261 kb on - strand, within AZOBR_RS01340 at 279.261 kb on - strand, within AZOBR_RS01340 at 279.267 kb on - strand, within AZOBR_RS01340 at 279.267 kb on - strand, within AZOBR_RS01340 at 279.720 kb on + strand, within AZOBR_RS01345 at 279.790 kb on - strand, within AZOBR_RS01345 at 281.854 kb on - strand, within AZOBR_RS01355 at 281.854 kb on - strand, within AZOBR_RS01355 at 281.992 kb on - strand, within AZOBR_RS01355 at 281.992 kb on - strand, within AZOBR_RS01355 at 282.502 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 279,260 + AZOBR_RS01340 0.80 -0.9 279,261 - AZOBR_RS01340 0.80 -0.0 279,261 - AZOBR_RS01340 0.80 +0.7 279,267 - AZOBR_RS01340 0.82 +0.3 279,267 - AZOBR_RS01340 0.82 -0.3 279,720 + AZOBR_RS01345 0.41 +2.8 279,790 - AZOBR_RS01345 0.57 +0.3 281,854 - AZOBR_RS01355 0.15 +0.6 281,854 - AZOBR_RS01355 0.15 -0.1 281,992 - AZOBR_RS01355 0.34 +0.1 281,992 - AZOBR_RS01355 0.34 +0.4 282,502 + -0.1
Or see this region's nucleotide sequence