Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_27000

Experiment: D-Ribose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Ribose (C)
5,916,876	+		AO353_26985	0.87	+1.3
5,916,876	+		AO353_26985	0.87	-0.3
5,916,876	+		AO353_26985	0.87	+0.1
5,916,876	+		AO353_26985	0.87	+0.2
5,916,876	+		AO353_26985	0.87	+0.2
5,916,877	-		AO353_26985	0.88	+0.4
5,916,877	-		AO353_26985	0.88	-0.7
5,916,877	-		AO353_26985	0.88	+0.5
5,916,877	-		AO353_26985	0.88	+0.1
5,916,895	+				-0.7
5,916,895	+				-0.3
5,916,895	+				-0.5
5,916,896	-				-0.3
5,916,925	-				+0.2
5,916,925	-				-0.1
5,916,927	-				+0.2
5,916,933	+				-0.1
5,916,933	+				-0.4
5,916,933	+				-0.4
5,916,934	-				+0.6
5,916,934	-				+1.5
5,916,934	-				-2.0
5,916,934	-				+1.0
5,916,934	-				-0.5
5,916,934	-				+1.8
5,916,971	+		AO353_26990	0.17	-0.3
5,916,972	-		AO353_26990	0.17	+1.0
5,917,000	+		AO353_26990	0.29	+0.5
5,917,038	+		AO353_26990	0.46	+1.4
5,917,038	+		AO353_26990	0.46	-0.8
5,917,039	-		AO353_26990	0.46	-0.2
5,917,039	-		AO353_26990	0.46	-0.3
5,917,145	+				-0.7
5,917,145	+				-0.2
5,917,146	-				-1.1
5,917,146	-				-0.8
5,917,146	-				+0.5
5,917,146	-				+0.2
5,917,146	-				+0.6
5,917,230	-				-0.1
5,917,230	-				-1.4
5,917,230	-				-0.4
5,917,244	+				-0.7
5,917,301	-				+0.3
5,917,301	-				-1.2
5,917,388	+		AO353_26995	0.25	-1.0
5,917,389	-		AO353_26995	0.25	+0.5
5,917,480	+		AO353_26995	0.51	-1.5
5,917,480	+		AO353_26995	0.51	-0.2
5,917,480	+		AO353_26995	0.51	-1.7
5,917,481	-		AO353_26995	0.51	+1.5
5,917,481	-		AO353_26995	0.51	+0.1
5,917,481	-		AO353_26995	0.51	-0.0
5,917,540	+		AO353_26995	0.68	-0.3
5,917,540	+		AO353_26995	0.68	-0.1
5,917,541	-		AO353_26995	0.68	+0.1
5,917,541	-		AO353_26995	0.68	+0.8
5,917,592	+		AO353_26995	0.82	+0.3
5,917,593	-		AO353_26995	0.82	+0.9
5,917,593	-		AO353_26995	0.82	-0.3
5,917,636	-				-0.8
5,917,655	+				+1.9
5,917,655	+				-0.3
5,917,655	+				-0.8
5,917,655	+				-0.8
5,917,655	+				+0.5
5,917,656	-				+0.1
5,917,656	-				+0.5
5,917,656	-				+1.2
5,917,658	+				+0.1
5,917,658	+				-0.1
5,917,658	+				-0.0
5,917,658	+				-0.5
5,917,658	+				+2.1
5,917,658	+				+0.1
5,917,658	+				+0.2
5,917,658	+				+0.4
5,917,659	-				-0.5
5,917,659	-				-0.7
5,917,659	-				-0.4
5,917,659	-				+0.7
5,917,669	+				-0.3
5,917,692	+				-0.1
5,917,692	+				-2.5
5,917,692	+				+0.8
5,917,693	-				-0.3
5,917,721	-				+0.6
5,917,729	+				+0.0
5,917,741	+				-1.0
5,917,742	-				-0.3
5,917,751	+				-0.5
5,917,751	+				-0.3
5,917,751	+				+1.0
5,917,752	-				-0.1
5,917,781	+				+0.3
5,917,781	+				-0.5
5,917,784	+				-1.0
5,917,784	+				-1.2
5,917,785	-				+1.3
5,917,999	+		AO353_27000	0.44	-0.7
5,918,000	-		AO353_27000	0.44	-0.6
5,918,000	-		AO353_27000	0.44	-0.1
5,918,000	-		AO353_27000	0.44	-0.2
5,918,000	-		AO353_27000	0.44	-1.1
5,918,198	+				+0.1
5,918,198	+				-0.9
5,918,199	-				+0.0
5,918,219	+				+0.0
5,918,220	-				+0.1
5,918,223	+				-0.8
5,918,223	+				-0.4
5,918,223	+				-0.9
5,918,223	+				+1.3
5,918,223	+				+0.5
5,918,223	+				+2.1
5,918,223	+				-0.2
5,918,223	+				-0.4
5,918,223	+				-0.3
5,918,223	+				-0.1
5,918,223	+				-0.2
5,918,223	+				+0.3
5,918,224	-				+0.5
5,918,224	-				-0.2
5,918,224	-				+0.9
5,918,224	-				-0.4
5,918,224	-				-0.1
5,918,224	-				-0.6
5,918,224	-				+0.3
5,918,224	-				+1.1
5,918,224	-				-0.4
5,918,224	-				+0.8
5,918,235	+				-0.2
5,918,235	+				-0.4
5,918,235	+				+1.5
5,918,236	-				-0.4
5,918,236	-				+0.5
5,918,348	+				-0.1
5,918,349	-				-1.0
5,918,349	-				+1.7
5,918,349	-				+0.4
5,918,350	+				+0.5
5,918,350	+				+0.5
5,918,350	+				+1.3
5,918,350	+				+0.9
5,918,350	+				+1.0
5,918,350	+				-1.7
5,918,350	+				-0.6
5,918,350	+				+0.2
5,918,350	+				-1.0
5,918,350	+				-1.4
5,918,350	+				+0.1
5,918,350	+				-0.4
5,918,351	-				-0.2
5,918,351	-				+0.5
5,918,351	-				+1.0
5,918,351	-				-0.3
5,918,351	-				-0.2
5,918,351	-				+1.2
5,918,370	+				+0.4
5,918,431	+				-0.5
5,918,431	+				-1.8
5,918,432	-				-0.3
5,918,432	-				-0.1
5,918,516	+				-0.4
5,918,516	+				-1.0
5,918,516	+				+0.0
5,918,516	+				-0.4
5,918,517	-				-1.1
5,918,517	-				-0.1
5,918,517	-				-0.8
5,918,517	-				+0.7
5,918,518	+				-0.2
5,918,518	+				-2.4
5,918,519	-				-0.2
5,918,519	-				-0.4
5,918,519	-				+1.8
5,918,519	-				+0.2
5,918,519	-				+0.5
5,918,519	-				-1.6
5,918,672	+		AO353_27005	0.19	-0.7
5,918,672	+		AO353_27005	0.19	-1.3
5,918,672	+		AO353_27005	0.19	+1.5
5,918,672	+		AO353_27005	0.19	-0.5
5,918,672	+		AO353_27005	0.19	-0.3
5,918,673	-		AO353_27005	0.19	+0.9
5,918,673	-		AO353_27005	0.19	+0.4
5,918,673	-		AO353_27005	0.19	-0.8
5,918,739	-		AO353_27005	0.28	-0.4
5,918,739	-		AO353_27005	0.28	-0.1
5,918,744	+		AO353_27005	0.29	+1.0
5,918,744	+		AO353_27005	0.29	-0.1
5,918,744	+		AO353_27005	0.29	-0.5
5,918,744	+		AO353_27005	0.29	-0.2
5,918,744	+		AO353_27005	0.29	+0.1
5,918,795	+		AO353_27005	0.36	+0.5
5,918,795	+		AO353_27005	0.36	-2.1
5,918,795	+		AO353_27005	0.36	-0.7
5,918,796	-		AO353_27005	0.36	+0.8
5,918,934	-		AO353_27005	0.55	+0.0
5,918,934	-		AO353_27005	0.55	-0.3
5,918,934	-		AO353_27005	0.55	+0.5
5,918,948	+		AO353_27005	0.57	-0.4
5,918,948	+		AO353_27005	0.57	+0.5
5,918,948	+		AO353_27005	0.57	+0.7
5,918,948	+		AO353_27005	0.57	-0.3
5,918,948	+		AO353_27005	0.57	+0.3
5,918,948	+		AO353_27005	0.57	+0.0
5,918,948	+		AO353_27005	0.57	-1.0
5,918,948	+		AO353_27005	0.57	+0.6
5,918,949	-		AO353_27005	0.57	+0.1
5,918,949	-		AO353_27005	0.57	-1.2
5,918,949	-		AO353_27005	0.57	+1.1