Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26510 and AO353_26515 are separated by 71 nucleotides AO353_26515 and AO353_26520 are separated by 235 nucleotides AO353_26520 and AO353_26525 are separated by 56 nucleotides
AO353_26510: AO353_26510 - ABC transporter ATP-binding protein, at 5,805,233 to 5,806,798
_26510
AO353_26515: AO353_26515 - phosphatidylserine synthase, at 5,806,870 to 5,808,213
_26515
AO353_26520: AO353_26520 - TetR family transcriptional regulator, at 5,808,449 to 5,809,012
_26520
AO353_26525: AO353_26525 - hypothetical protein, at 5,809,069 to 5,809,548
_26525
Position (kb) 5806
5807
5808
5809 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5805.888 kb on - strand, within AO353_26510 at 5805.888 kb on - strand, within AO353_26510 at 5805.917 kb on + strand, within AO353_26510 at 5805.917 kb on + strand, within AO353_26510 at 5805.917 kb on + strand, within AO353_26510 at 5805.917 kb on + strand, within AO353_26510 at 5805.918 kb on - strand, within AO353_26510 at 5805.918 kb on - strand, within AO353_26510 at 5805.918 kb on - strand, within AO353_26510 at 5805.918 kb on - strand, within AO353_26510 at 5805.918 kb on - strand, within AO353_26510 at 5805.926 kb on + strand, within AO353_26510 at 5805.926 kb on + strand, within AO353_26510 at 5805.926 kb on + strand, within AO353_26510 at 5805.926 kb on + strand, within AO353_26510 at 5805.927 kb on - strand, within AO353_26510 at 5805.927 kb on - strand, within AO353_26510 at 5805.927 kb on - strand, within AO353_26510 at 5806.054 kb on + strand, within AO353_26510 at 5806.055 kb on - strand, within AO353_26510 at 5806.055 kb on - strand, within AO353_26510 at 5806.280 kb on - strand, within AO353_26510 at 5806.280 kb on - strand, within AO353_26510 at 5806.367 kb on + strand, within AO353_26510 at 5806.367 kb on + strand, within AO353_26510 at 5806.368 kb on - strand, within AO353_26510 at 5806.368 kb on - strand, within AO353_26510 at 5806.368 kb on - strand, within AO353_26510 at 5806.368 kb on - strand, within AO353_26510 at 5806.760 kb on + strand at 5806.760 kb on + strand at 5806.760 kb on + strand at 5806.760 kb on + strand at 5806.760 kb on + strand at 5806.761 kb on - strand at 5806.761 kb on - strand at 5806.761 kb on - strand at 5806.761 kb on - strand at 5806.761 kb on - strand at 5806.769 kb on + strand at 5806.769 kb on + strand at 5806.770 kb on - strand at 5806.796 kb on + strand at 5806.796 kb on + strand at 5806.796 kb on + strand at 5806.796 kb on + strand at 5806.796 kb on + strand at 5806.796 kb on + strand at 5806.796 kb on + strand at 5806.796 kb on + strand at 5806.797 kb on - strand at 5806.797 kb on - strand at 5806.797 kb on - strand at 5806.797 kb on - strand at 5806.797 kb on - strand at 5806.800 kb on + strand at 5806.807 kb on - strand at 5806.807 kb on - strand at 5807.126 kb on + strand, within AO353_26515 at 5807.126 kb on + strand, within AO353_26515 at 5807.126 kb on + strand, within AO353_26515 at 5807.159 kb on + strand, within AO353_26515 at 5807.159 kb on + strand, within AO353_26515 at 5807.159 kb on + strand, within AO353_26515 at 5807.159 kb on + strand, within AO353_26515 at 5807.160 kb on - strand, within AO353_26515 at 5807.160 kb on - strand, within AO353_26515 at 5807.160 kb on - strand, within AO353_26515 at 5807.160 kb on - strand, within AO353_26515 at 5807.160 kb on - strand, within AO353_26515 at 5807.160 kb on - strand, within AO353_26515 at 5807.160 kb on - strand, within AO353_26515 at 5807.160 kb on - strand, within AO353_26515 at 5807.255 kb on + strand at 5807.255 kb on + strand, within AO353_26515 at 5807.255 kb on + strand, within AO353_26515 at 5807.256 kb on - strand, within AO353_26515 at 5807.256 kb on - strand, within AO353_26515 at 5807.261 kb on + strand, within AO353_26515 at 5807.261 kb on + strand, within AO353_26515 at 5807.261 kb on + strand, within AO353_26515 at 5807.262 kb on - strand, within AO353_26515 at 5807.262 kb on - strand, within AO353_26515 at 5807.262 kb on - strand, within AO353_26515 at 5807.262 kb on - strand, within AO353_26515 at 5807.262 kb on - strand, within AO353_26515 at 5807.306 kb on + strand, within AO353_26515 at 5807.306 kb on + strand, within AO353_26515 at 5807.306 kb on + strand, within AO353_26515 at 5807.306 kb on + strand, within AO353_26515 at 5807.306 kb on + strand, within AO353_26515 at 5807.307 kb on - strand, within AO353_26515 at 5807.307 kb on - strand, within AO353_26515 at 5807.307 kb on - strand, within AO353_26515 at 5807.307 kb on - strand, within AO353_26515 at 5807.307 kb on - strand, within AO353_26515 at 5807.307 kb on - strand, within AO353_26515 at 5807.408 kb on + strand, within AO353_26515 at 5807.408 kb on + strand, within AO353_26515 at 5807.409 kb on - strand, within AO353_26515 at 5807.421 kb on + strand, within AO353_26515 at 5807.422 kb on - strand, within AO353_26515 at 5807.422 kb on - strand, within AO353_26515 at 5807.549 kb on + strand, within AO353_26515 at 5807.549 kb on + strand, within AO353_26515 at 5807.549 kb on + strand, within AO353_26515 at 5807.549 kb on + strand, within AO353_26515 at 5807.549 kb on + strand, within AO353_26515 at 5807.549 kb on + strand, within AO353_26515 at 5807.646 kb on + strand, within AO353_26515 at 5807.646 kb on + strand, within AO353_26515 at 5807.647 kb on - strand, within AO353_26515 at 5807.732 kb on + strand, within AO353_26515 at 5807.733 kb on - strand at 5807.733 kb on - strand, within AO353_26515 at 5807.733 kb on - strand, within AO353_26515 at 5807.733 kb on - strand, within AO353_26515 at 5807.733 kb on - strand, within AO353_26515 at 5807.746 kb on - strand, within AO353_26515 at 5807.753 kb on + strand, within AO353_26515 at 5807.753 kb on + strand at 5807.754 kb on - strand, within AO353_26515 at 5807.754 kb on - strand, within AO353_26515 at 5807.754 kb on - strand, within AO353_26515 at 5807.780 kb on + strand, within AO353_26515 at 5807.780 kb on + strand, within AO353_26515 at 5807.781 kb on - strand, within AO353_26515 at 5807.781 kb on - strand, within AO353_26515 at 5807.812 kb on - strand, within AO353_26515 at 5807.858 kb on + strand, within AO353_26515 at 5807.858 kb on + strand, within AO353_26515 at 5807.859 kb on - strand, within AO353_26515 at 5807.859 kb on - strand, within AO353_26515 at 5807.859 kb on - strand, within AO353_26515 at 5807.859 kb on - strand, within AO353_26515 at 5807.859 kb on - strand, within AO353_26515 at 5807.900 kb on + strand, within AO353_26515 at 5808.056 kb on + strand, within AO353_26515 at 5808.057 kb on - strand, within AO353_26515 at 5808.072 kb on - strand, within AO353_26515 at 5808.072 kb on - strand, within AO353_26515 at 5808.072 kb on - strand, within AO353_26515 at 5808.072 kb on - strand, within AO353_26515 at 5808.072 kb on - strand, within AO353_26515 at 5808.072 kb on - strand, within AO353_26515 at 5808.187 kb on + strand at 5808.187 kb on + strand at 5808.188 kb on - strand at 5808.188 kb on - strand at 5808.188 kb on - strand at 5808.213 kb on + strand at 5808.214 kb on - strand at 5808.214 kb on - strand at 5808.253 kb on + strand at 5808.253 kb on + strand at 5808.253 kb on + strand at 5808.253 kb on + strand at 5808.254 kb on - strand at 5808.254 kb on - strand at 5808.254 kb on - strand at 5808.254 kb on - strand at 5808.254 kb on - strand at 5808.254 kb on - strand at 5808.254 kb on - strand at 5808.254 kb on - strand at 5808.294 kb on + strand at 5808.295 kb on - strand at 5808.342 kb on + strand at 5808.343 kb on - strand at 5808.513 kb on - strand, within AO353_26520 at 5808.766 kb on + strand, within AO353_26520 at 5808.848 kb on + strand, within AO353_26520 at 5808.848 kb on + strand, within AO353_26520 at 5808.848 kb on + strand, within AO353_26520 at 5808.848 kb on + strand, within AO353_26520 at 5808.848 kb on + strand, within AO353_26520 at 5808.879 kb on + strand, within AO353_26520 at 5808.880 kb on - strand, within AO353_26520 at 5808.934 kb on + strand, within AO353_26520 at 5808.999 kb on + strand at 5809.067 kb on - strand at 5809.077 kb on + strand at 5809.077 kb on + strand at 5809.077 kb on + strand at 5809.077 kb on + strand at 5809.192 kb on + strand, within AO353_26525 at 5809.193 kb on - strand, within AO353_26525
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 5,805,888 - AO353_26510 0.42 +1.5 5,805,888 - AO353_26510 0.42 -0.5 5,805,917 + AO353_26510 0.44 -0.4 5,805,917 + AO353_26510 0.44 +1.0 5,805,917 + AO353_26510 0.44 -1.0 5,805,917 + AO353_26510 0.44 -0.3 5,805,918 - AO353_26510 0.44 -0.4 5,805,918 - AO353_26510 0.44 +1.0 5,805,918 - AO353_26510 0.44 -0.4 5,805,918 - AO353_26510 0.44 +1.2 5,805,918 - AO353_26510 0.44 +0.1 5,805,926 + AO353_26510 0.44 -0.7 5,805,926 + AO353_26510 0.44 -0.4 5,805,926 + AO353_26510 0.44 +0.7 5,805,926 + AO353_26510 0.44 -0.7 5,805,927 - AO353_26510 0.44 +0.4 5,805,927 - AO353_26510 0.44 -0.0 5,805,927 - AO353_26510 0.44 +0.1 5,806,054 + AO353_26510 0.52 +0.7 5,806,055 - AO353_26510 0.52 +0.6 5,806,055 - AO353_26510 0.52 -0.3 5,806,280 - AO353_26510 0.67 +1.5 5,806,280 - AO353_26510 0.67 -0.5 5,806,367 + AO353_26510 0.72 -0.4 5,806,367 + AO353_26510 0.72 +0.8 5,806,368 - AO353_26510 0.72 -0.9 5,806,368 - AO353_26510 0.72 +0.2 5,806,368 - AO353_26510 0.72 +0.3 5,806,368 - AO353_26510 0.72 +0.9 5,806,760 + +0.5 5,806,760 + -1.2 5,806,760 + +0.1 5,806,760 + +0.2 5,806,760 + +0.3 5,806,761 - -0.5 5,806,761 - +1.6 5,806,761 - +0.3 5,806,761 - -1.0 5,806,761 - -0.3 5,806,769 + +0.0 5,806,769 + -0.0 5,806,770 - +0.9 5,806,796 + +0.5 5,806,796 + -0.1 5,806,796 + +0.0 5,806,796 + -0.4 5,806,796 + +1.3 5,806,796 + -1.7 5,806,796 + +0.1 5,806,796 + -1.0 5,806,797 - -1.4 5,806,797 - -0.3 5,806,797 - -0.0 5,806,797 - +0.5 5,806,797 - -0.3 5,806,800 + -1.3 5,806,807 - +0.4 5,806,807 - +0.5 5,807,126 + AO353_26515 0.19 +0.8 5,807,126 + AO353_26515 0.19 +1.0 5,807,126 + AO353_26515 0.19 +0.6 5,807,159 + AO353_26515 0.22 +0.1 5,807,159 + AO353_26515 0.22 +0.6 5,807,159 + AO353_26515 0.22 -1.0 5,807,159 + AO353_26515 0.22 +0.3 5,807,160 - AO353_26515 0.22 -0.3 5,807,160 - AO353_26515 0.22 +0.5 5,807,160 - AO353_26515 0.22 +1.2 5,807,160 - AO353_26515 0.22 -0.0 5,807,160 - AO353_26515 0.22 +1.0 5,807,160 - AO353_26515 0.22 +1.6 5,807,160 - AO353_26515 0.22 -0.5 5,807,160 - AO353_26515 0.22 +0.6 5,807,255 + -0.1 5,807,255 + AO353_26515 0.29 +0.1 5,807,255 + AO353_26515 0.29 +1.4 5,807,256 - AO353_26515 0.29 -0.2 5,807,256 - AO353_26515 0.29 +1.9 5,807,261 + AO353_26515 0.29 +0.3 5,807,261 + AO353_26515 0.29 +1.9 5,807,261 + AO353_26515 0.29 +1.5 5,807,262 - AO353_26515 0.29 +0.1 5,807,262 - AO353_26515 0.29 +1.7 5,807,262 - AO353_26515 0.29 +0.9 5,807,262 - AO353_26515 0.29 +1.0 5,807,262 - AO353_26515 0.29 -0.4 5,807,306 + AO353_26515 0.32 +1.5 5,807,306 + AO353_26515 0.32 +0.8 5,807,306 + AO353_26515 0.32 -0.3 5,807,306 + AO353_26515 0.32 +0.6 5,807,306 + AO353_26515 0.32 -0.4 5,807,307 - AO353_26515 0.33 +1.0 5,807,307 - AO353_26515 0.33 +0.7 5,807,307 - AO353_26515 0.33 +0.7 5,807,307 - AO353_26515 0.33 +0.9 5,807,307 - AO353_26515 0.33 +0.5 5,807,307 - AO353_26515 0.33 -0.5 5,807,408 + AO353_26515 0.40 +0.5 5,807,408 + AO353_26515 0.40 +0.3 5,807,409 - AO353_26515 0.40 +0.6 5,807,421 + AO353_26515 0.41 +0.2 5,807,422 - AO353_26515 0.41 +0.5 5,807,422 - AO353_26515 0.41 +1.2 5,807,549 + AO353_26515 0.51 +1.1 5,807,549 + AO353_26515 0.51 +0.2 5,807,549 + AO353_26515 0.51 -0.8 5,807,549 + AO353_26515 0.51 +0.0 5,807,549 + AO353_26515 0.51 +0.4 5,807,549 + AO353_26515 0.51 +0.9 5,807,646 + AO353_26515 0.58 -1.0 5,807,646 + AO353_26515 0.58 -1.1 5,807,647 - AO353_26515 0.58 +0.9 5,807,732 + AO353_26515 0.64 +0.1 5,807,733 - +0.9 5,807,733 - AO353_26515 0.64 +0.9 5,807,733 - AO353_26515 0.64 +0.4 5,807,733 - AO353_26515 0.64 -0.3 5,807,733 - AO353_26515 0.64 +0.2 5,807,746 - AO353_26515 0.65 +0.5 5,807,753 + AO353_26515 0.66 +0.7 5,807,753 + +0.3 5,807,754 - AO353_26515 0.66 +0.8 5,807,754 - AO353_26515 0.66 +1.2 5,807,754 - AO353_26515 0.66 -0.3 5,807,780 + AO353_26515 0.68 -0.3 5,807,780 + AO353_26515 0.68 -0.7 5,807,781 - AO353_26515 0.68 -1.3 5,807,781 - AO353_26515 0.68 +0.5 5,807,812 - AO353_26515 0.70 +1.8 5,807,858 + AO353_26515 0.74 +0.5 5,807,858 + AO353_26515 0.74 -0.5 5,807,859 - AO353_26515 0.74 -0.4 5,807,859 - AO353_26515 0.74 -2.2 5,807,859 - AO353_26515 0.74 -0.6 5,807,859 - AO353_26515 0.74 +0.3 5,807,859 - AO353_26515 0.74 -0.3 5,807,900 + AO353_26515 0.77 +0.8 5,808,056 + AO353_26515 0.88 +0.2 5,808,057 - AO353_26515 0.88 +0.5 5,808,072 - AO353_26515 0.89 -0.2 5,808,072 - AO353_26515 0.89 +0.8 5,808,072 - AO353_26515 0.89 -0.4 5,808,072 - AO353_26515 0.89 -0.5 5,808,072 - AO353_26515 0.89 +0.4 5,808,072 - AO353_26515 0.89 +0.8 5,808,187 + -1.3 5,808,187 + +0.7 5,808,188 - +0.3 5,808,188 - -0.7 5,808,188 - +0.0 5,808,213 + +0.9 5,808,214 - +0.3 5,808,214 - -0.4 5,808,253 + +0.1 5,808,253 + -0.7 5,808,253 + -0.4 5,808,253 + -0.2 5,808,254 - +0.7 5,808,254 - -0.3 5,808,254 - -1.5 5,808,254 - -0.0 5,808,254 - -0.2 5,808,254 - -1.0 5,808,254 - -1.5 5,808,254 - -0.7 5,808,294 + -2.0 5,808,295 - -0.4 5,808,342 + +1.0 5,808,343 - -1.9 5,808,513 - AO353_26520 0.11 -2.4 5,808,766 + AO353_26520 0.56 -0.3 5,808,848 + AO353_26520 0.71 +0.5 5,808,848 + AO353_26520 0.71 -0.3 5,808,848 + AO353_26520 0.71 +0.3 5,808,848 + AO353_26520 0.71 +0.4 5,808,848 + AO353_26520 0.71 -1.6 5,808,879 + AO353_26520 0.76 +1.0 5,808,880 - AO353_26520 0.76 -2.3 5,808,934 + AO353_26520 0.86 -1.3 5,808,999 + -0.4 5,809,067 - +0.5 5,809,077 + -0.5 5,809,077 + -0.7 5,809,077 + -0.5 5,809,077 + +0.7 5,809,192 + AO353_26525 0.26 -0.9 5,809,193 - AO353_26525 0.26 -0.5
Or see this region's nucleotide sequence