Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24665

Experiment: D-Ribose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Ribose (C)
5,428,083	+		AO353_24660	0.30	+0.2
5,428,084	-		AO353_24660	0.30	-0.8
5,428,084	-		AO353_24660	0.30	+0.1
5,428,382	+		AO353_24660	0.54	+1.3
5,428,383	-		AO353_24660	0.54	-0.9
5,428,494	-		AO353_24660	0.63	-0.6
5,428,499	+		AO353_24660	0.64	-0.6
5,428,500	-		AO353_24660	0.64	+0.4
5,428,599	-		AO353_24660	0.72	-1.1
5,428,599	-		AO353_24660	0.72	+0.1
5,428,599	-				+0.4
5,428,632	+		AO353_24660	0.74	+0.2
5,428,633	-		AO353_24660	0.75	+1.6
5,428,657	+				+0.8
5,428,657	+		AO353_24660	0.76	-0.6
5,428,658	-		AO353_24660	0.77	-0.4
5,428,844	+				-0.1
5,428,844	+				-1.4
5,428,844	+				-0.1
5,428,844	+				-0.5
5,428,845	-				-0.4
5,428,960	+				+0.2
5,428,960	+				+0.3
5,428,960	+				-0.6
5,428,960	+				+0.5
5,428,960	+				-0.0
5,428,960	+				+0.5
5,428,961	-				-0.4
5,428,962	+				+1.2
5,428,996	+				-2.2
5,428,997	-				+0.4
5,428,997	-				-0.6
5,429,001	-				+0.8
5,429,028	+				+0.3
5,429,029	-				+0.8
5,429,111	+				+0.7
5,429,150	-				+0.7
5,429,152	+				+1.6
5,429,152	+				+1.5
5,429,152	+				+1.3
5,429,152	+				+0.8
5,429,152	+				+1.8
5,429,153	-				+2.5
5,429,285	-		AO353_24665	0.13	+0.9
5,429,422	+		AO353_24665	0.21	+1.7
5,429,423	-		AO353_24665	0.21	+0.8
5,429,461	+		AO353_24665	0.23	+1.6
5,429,461	+		AO353_24665	0.23	-0.2
5,429,461	+		AO353_24665	0.23	+0.9
5,429,462	-		AO353_24665	0.24	-0.2
5,429,462	-				+2.5
5,429,462	-		AO353_24665	0.24	+0.5
5,429,462	-		AO353_24665	0.24	+1.5
5,429,462	-		AO353_24665	0.24	-0.2
5,429,476	-		AO353_24665	0.24	+1.7
5,429,476	-		AO353_24665	0.24	+1.2
5,429,476	-		AO353_24665	0.24	+0.1
5,429,476	-		AO353_24665	0.24	+1.2
5,429,502	+		AO353_24665	0.26	+0.8
5,429,539	+		AO353_24665	0.28	+0.9
5,429,540	-		AO353_24665	0.28	+1.5
5,429,545	+		AO353_24665	0.29	+1.1
5,429,545	+		AO353_24665	0.29	+1.9
5,429,545	+		AO353_24665	0.29	+0.9
5,429,545	+		AO353_24665	0.29	+1.0
5,429,545	+		AO353_24665	0.29	+0.7
5,429,545	+		AO353_24665	0.29	+1.4
5,429,546	-		AO353_24665	0.29	+2.1
5,429,546	-		AO353_24665	0.29	+1.9
5,429,546	-		AO353_24665	0.29	+0.9
5,429,546	-		AO353_24665	0.29	+2.3
5,429,546	-		AO353_24665	0.29	+0.8
5,429,546	-		AO353_24665	0.29	+0.1
5,429,546	-		AO353_24665	0.29	+1.4
5,429,654	-		AO353_24665	0.35	+0.9
5,429,696	-		AO353_24665	0.38	+0.6
5,429,703	+		AO353_24665	0.38	+0.0
5,429,703	+		AO353_24665	0.38	+1.9
5,429,703	+		AO353_24665	0.38	+1.8
5,429,703	+		AO353_24665	0.38	+2.0
5,429,703	+		AO353_24665	0.38	+1.4
5,429,703	+		AO353_24665	0.38	+0.9
5,429,704	-		AO353_24665	0.38	+1.7
5,429,704	-		AO353_24665	0.38	+1.1
5,429,707	+		AO353_24665	0.38	+1.2
5,429,707	+		AO353_24665	0.38	+1.4
5,429,707	+		AO353_24665	0.38	+1.5
5,429,707	+		AO353_24665	0.38	+1.1
5,429,707	+		AO353_24665	0.38	+1.0
5,429,708	-		AO353_24665	0.38	+0.7
5,429,708	-		AO353_24665	0.38	+1.3
5,429,708	-		AO353_24665	0.38	+1.9
5,429,708	-		AO353_24665	0.38	+2.0
5,429,708	-		AO353_24665	0.38	+1.4
5,429,708	-		AO353_24665	0.38	+0.2
5,430,049	+		AO353_24665	0.59	+0.9
5,430,049	+		AO353_24665	0.59	-0.0
5,430,049	+		AO353_24665	0.59	+1.1
5,430,049	+		AO353_24665	0.59	+1.7
5,430,049	+		AO353_24665	0.59	+1.8
5,430,050	-		AO353_24665	0.59	+1.6
5,430,050	-		AO353_24665	0.59	+0.4
5,430,050	-		AO353_24665	0.59	+0.8
5,430,050	-		AO353_24665	0.59	+0.2
5,430,050	-		AO353_24665	0.59	+1.5
5,430,070	+		AO353_24665	0.60	-0.2
5,430,071	-		AO353_24665	0.61	+2.3
5,430,071	-		AO353_24665	0.61	+0.1
5,430,277	-		AO353_24665	0.73	+1.5
5,430,376	+		AO353_24665	0.79	+0.7
5,430,622	+				+0.2
5,430,622	+				+0.4
5,430,622	+				+0.7
5,430,622	+				+0.6
5,430,622	+				+1.6
5,430,622	+				+1.9
5,430,622	+				+1.2
5,430,623	-				+1.9
5,430,623	-				+1.5
5,430,623	-				+1.5
5,430,623	-				+1.7
5,430,623	-				+2.0
5,430,623	-				+1.2
5,430,623	-				+0.9
5,430,623	-				+1.6
5,430,632	-				+0.6
5,430,632	-				+0.4
5,430,718	+				+0.3
5,430,718	+				+0.7
5,430,718	+				-1.9
5,430,718	+				-0.3
5,430,719	-				-0.6
5,430,721	+				-0.2
5,430,721	+				-1.4
5,430,721	+				+1.6
5,430,722	-				-0.1
5,430,723	-				+0.4
5,430,786	+				-0.2
5,430,819	-				+1.0
5,430,864	+				+0.3
5,430,864	+				+0.6
5,430,864	+				-0.0
5,430,864	+				+0.3
5,430,864	+				-1.4
5,430,864	+				-2.3
5,430,864	+				-1.2
5,430,864	+				+0.5
5,430,874	-				+1.5
5,430,890	+				+0.5
5,430,890	+				+0.1
5,430,890	+				+0.5
5,430,891	-				-0.3
5,430,891	-				-0.7
5,431,358	+		AO353_24670	0.55	+0.8
5,431,358	+		AO353_24670	0.55	-0.6
5,431,358	+		AO353_24670	0.55	-1.0
5,431,358	+		AO353_24670	0.55	+0.6
5,431,358	+		AO353_24670	0.55	+0.6
5,431,359	-		AO353_24670	0.55	-1.4
5,431,399	+				+0.1
5,431,399	+		AO353_24670	0.61	-1.2
5,431,399	+		AO353_24670	0.61	-0.9
5,431,399	+		AO353_24670	0.61	+0.2
5,431,399	+		AO353_24670	0.61	-0.8
5,431,399	+		AO353_24670	0.61	-0.4
5,431,399	+		AO353_24670	0.61	-1.9
5,431,399	+		AO353_24670	0.61	+1.4
5,431,399	+		AO353_24670	0.61	+1.6
5,431,400	-		AO353_24670	0.61	-0.3
5,431,400	-		AO353_24670	0.61	-0.6
5,431,400	-		AO353_24670	0.61	+0.1
5,431,400	-		AO353_24670	0.61	+0.1
5,431,400	-		AO353_24670	0.61	-1.6
5,431,400	-		AO353_24670	0.61	-1.3
5,431,469	+		AO353_24670	0.71	+3.0
5,431,469	+		AO353_24670	0.71	+0.3
5,431,469	+		AO353_24670	0.71	+0.5
5,431,469	+		AO353_24670	0.71	+0.7
5,431,469	+		AO353_24670	0.71	-0.6
5,431,469	+		AO353_24670	0.71	-0.0
5,431,470	-		AO353_24670	0.71	+0.8
5,431,470	-		AO353_24670	0.71	-1.1
5,431,470	-		AO353_24670	0.71	-0.1
5,431,470	-		AO353_24670	0.71	+0.8
5,431,470	-		AO353_24670	0.71	-1.2
5,431,470	-		AO353_24670	0.71	-0.1
5,431,583	+		AO353_24670	0.88	-0.0
5,431,584	-		AO353_24670	0.88	-0.2