Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22945

Experiment: D-Ribose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Ribose (C)
5,037,978	+		AO353_22940	0.71	+0.6
5,037,978	+		AO353_22940	0.71	+0.5
5,037,978	+				+0.5
5,037,979	-		AO353_22940	0.71	-0.8
5,037,979	-		AO353_22940	0.71	+0.2
5,038,014	+		AO353_22940	0.72	+1.5
5,038,055	-		AO353_22940	0.73	+0.3
5,038,156	+		AO353_22940	0.76	-0.9
5,038,156	+		AO353_22940	0.76	+0.0
5,038,156	+		AO353_22940	0.76	+0.8
5,038,156	+		AO353_22940	0.76	-0.5
5,038,157	-		AO353_22940	0.76	+0.6
5,038,157	-		AO353_22940	0.76	+1.0
5,038,157	-		AO353_22940	0.76	-0.2
5,038,157	-		AO353_22940	0.76	+0.6
5,038,157	-		AO353_22940	0.76	-0.2
5,038,157	-		AO353_22940	0.76	+0.3
5,038,273	-		AO353_22940	0.80	-0.5
5,038,522	+		AO353_22940	0.87	-0.4
5,038,522	+		AO353_22940	0.87	+0.0
5,038,523	-		AO353_22940	0.87	-0.7
5,038,589	-		AO353_22940	0.89	+0.7
5,038,761	+				-0.1
5,038,762	-				-0.4
5,038,762	-				-0.1
5,038,762	-				-0.1
5,038,762	-				-0.4
5,038,762	-				-1.3
5,038,762	-				+0.4
5,038,849	+				+0.1
5,038,850	-				+1.0
5,038,898	+				-0.5
5,038,898	+				+0.0
5,038,898	+				+0.7
5,038,898	+				+0.6
5,038,898	+				+0.3
5,038,899	-				-0.1
5,038,899	-				+0.7
5,038,899	-				+0.3
5,038,899	-				+0.6
5,038,899	-				+0.3
5,038,899	-				+0.2
5,038,901	-				+0.7
5,038,901	-				-0.8
5,038,933	+				-0.7
5,038,933	+				+0.4
5,038,933	+				-0.3
5,038,934	-				+1.2
5,038,934	-				-0.3
5,038,934	-				-0.6
5,039,109	+				-0.5
5,039,109	+				-1.8
5,039,229	+		AO353_22945	0.12	-1.5
5,039,229	+		AO353_22945	0.12	-3.1
5,039,229	+		AO353_22945	0.12	-1.7
5,039,229	+		AO353_22945	0.12	-0.1
5,039,229	+		AO353_22945	0.12	-1.3
5,039,230	-		AO353_22945	0.12	-2.0
5,039,230	-		AO353_22945	0.12	-1.3
5,039,230	-		AO353_22945	0.12	-2.4
5,039,230	-		AO353_22945	0.12	-1.8
5,039,230	-		AO353_22945	0.12	-2.2
5,039,280	+		AO353_22945	0.15	-2.3
5,039,280	+		AO353_22945	0.15	-2.5
5,039,281	-		AO353_22945	0.15	-1.7
5,039,316	+		AO353_22945	0.16	-2.8
5,039,316	+		AO353_22945	0.16	-1.8
5,039,316	+		AO353_22945	0.16	-2.5
5,039,317	-		AO353_22945	0.16	-1.5
5,039,317	-		AO353_22945	0.16	-1.5
5,039,317	-		AO353_22945	0.16	-2.3
5,039,547	+		AO353_22945	0.27	-1.7
5,039,547	+		AO353_22945	0.27	-1.2
5,039,547	+		AO353_22945	0.27	-3.0
5,039,548	-		AO353_22945	0.27	-2.5
5,039,548	-		AO353_22945	0.27	-2.8
5,039,548	-		AO353_22945	0.27	-2.8
5,039,661	-		AO353_22945	0.32	-2.8
5,039,733	+		AO353_22945	0.35	-1.1
5,039,733	+		AO353_22945	0.35	-2.3
5,039,733	+		AO353_22945	0.35	-0.8
5,039,733	+		AO353_22945	0.35	+1.5
5,039,733	+		AO353_22945	0.35	-2.2
5,039,734	-		AO353_22945	0.35	-1.8
5,039,832	+		AO353_22945	0.39	-1.7
5,039,832	+		AO353_22945	0.39	-2.4
5,039,832	+		AO353_22945	0.39	-1.1
5,039,832	+		AO353_22945	0.39	-3.9
5,039,832	+		AO353_22945	0.39	-2.6
5,039,832	+		AO353_22945	0.39	-0.7
5,039,832	+		AO353_22945	0.39	-2.8
5,039,833	-		AO353_22945	0.39	-1.7
5,039,833	-		AO353_22945	0.39	-1.6
5,039,833	-		AO353_22945	0.39	-4.6
5,039,858	+		AO353_22945	0.40	-1.7
5,040,078	+		AO353_22945	0.50	-3.3
5,040,078	+		AO353_22945	0.50	-1.5
5,040,079	-		AO353_22945	0.50	-2.6
5,040,132	+		AO353_22945	0.53	-2.1
5,040,132	+		AO353_22945	0.53	-4.3
5,040,132	+		AO353_22945	0.53	-3.8
5,040,132	+		AO353_22945	0.53	-1.4
5,040,133	-		AO353_22945	0.53	-1.8
5,040,133	-		AO353_22945	0.53	-1.1
5,040,133	-		AO353_22945	0.53	-1.8
5,040,154	+		AO353_22945	0.54	-1.7
5,040,154	+		AO353_22945	0.54	+0.5
5,040,154	+		AO353_22945	0.54	-0.5
5,040,154	+		AO353_22945	0.54	-1.5
5,040,154	+		AO353_22945	0.54	-3.3
5,040,154	+		AO353_22945	0.54	-1.7
5,040,155	-		AO353_22945	0.54	-1.1
5,040,155	-		AO353_22945	0.54	-1.8
5,040,155	-		AO353_22945	0.54	-1.8
5,040,155	-		AO353_22945	0.54	-1.0
5,040,155	-		AO353_22945	0.54	-1.3
5,040,155	-		AO353_22945	0.54	-3.0
5,040,444	+		AO353_22945	0.67	-2.1
5,040,444	+		AO353_22945	0.67	-1.3
5,040,483	+		AO353_22945	0.68	-2.3
5,040,483	+		AO353_22945	0.68	-1.5
5,040,483	+		AO353_22945	0.68	+0.1
5,040,483	+		AO353_22945	0.68	-0.2
5,040,483	+		AO353_22945	0.68	-1.8
5,040,483	+		AO353_22945	0.68	-1.5
5,040,483	+		AO353_22945	0.68	-3.8
5,040,483	+		AO353_22945	0.68	-0.5
5,040,484	-		AO353_22945	0.69	-0.8
5,040,484	-		AO353_22945	0.69	-3.6
5,040,484	-		AO353_22945	0.69	+0.7
5,040,484	-		AO353_22945	0.69	-0.5
5,040,484	-		AO353_22945	0.69	-2.1
5,040,546	+		AO353_22945	0.71	-0.0
5,040,546	+		AO353_22945	0.71	-1.3
5,040,546	+		AO353_22945	0.71	-2.9
5,040,546	+		AO353_22945	0.71	-0.1
5,040,546	+		AO353_22945	0.71	-1.0
5,040,546	+		AO353_22945	0.71	-1.5
5,040,547	-		AO353_22945	0.71	-2.0
5,040,666	+		AO353_22945	0.77	-2.8
5,040,666	+		AO353_22945	0.77	-2.3
5,040,667	-		AO353_22945	0.77	-0.5
5,040,667	-		AO353_22945	0.77	-2.5
5,040,768	+		AO353_22945	0.81	-1.8
5,040,769	-		AO353_22945	0.81	-2.1
5,040,769	-		AO353_22945	0.81	-1.2
5,040,918	+		AO353_22945	0.88	-1.1
5,040,919	-		AO353_22945	0.88	-1.5
5,041,059	+				-1.3
5,041,060	-				-2.0
5,041,060	-				-1.5
5,041,074	+				-1.8
5,041,273	+				-1.3
5,041,273	+				+1.0
5,041,273	+				+0.0
5,041,274	-				-0.8
5,041,274	-				-1.4
5,041,445	+		AO353_22950	0.20	-0.2
5,041,446	-		AO353_22950	0.20	+0.9
5,041,446	-		AO353_22950	0.20	+0.8
5,041,446	-		AO353_22950	0.20	-0.2
5,041,456	+		AO353_22950	0.21	-0.1
5,041,457	-		AO353_22950	0.21	-0.1
5,041,457	-		AO353_22950	0.21	+0.2
5,041,563	-		AO353_22950	0.34	+0.5
5,042,016	-		AO353_22950	0.86	-0.6
5,042,181	+				+0.7
5,042,181	+				-1.1
5,042,181	+				+0.6
5,042,181	+				-0.2
5,042,181	+				+0.6
5,042,181	+				-1.0
5,042,182	-				+0.1
5,042,182	-				+0.1
5,042,183	+				+0.2
5,042,183	+				-0.0
5,042,184	-				-0.9
5,042,184	-				+0.8
5,042,184	-				+0.1
5,042,184	-				+1.5
5,042,184	-				-0.2
5,042,184	-				-0.2
5,042,184	-				-0.1
5,042,184	-				+0.5