Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22475

Experiment: D-Ribose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Ribose (C)
4,929,273	+				+0.3
4,929,348	+				-2.4
4,929,349	-				-1.3
4,929,349	-				-1.1
4,929,349	-				-1.1
4,929,349	-				+1.5
4,929,352	+				+0.1
4,929,417	+				-0.0
4,929,418	-				+2.1
4,929,426	+				+0.9
4,929,427	-				+0.9
4,929,427	-				+1.1
4,929,428	+				+0.1
4,929,438	+				+0.1
4,929,438	+				+3.7
4,929,439	-				-1.8
4,929,439	-				+0.1
4,929,439	-				+1.0
4,929,439	-				-0.1
4,929,494	+		AO353_22470	0.13	+0.5
4,929,553	-		AO353_22470	0.20	+0.1
4,929,774	-		AO353_22470	0.45	-0.7
4,929,987	+		AO353_22470	0.69	-0.4
4,929,987	+		AO353_22470	0.69	+0.8
4,929,987	+		AO353_22470	0.69	+1.0
4,930,050	+		AO353_22470	0.76	-0.7
4,930,050	+		AO353_22470	0.76	+3.5
4,930,050	+		AO353_22470	0.76	+0.3
4,930,050	+		AO353_22470	0.76	+0.6
4,930,050	+		AO353_22470	0.76	+0.2
4,930,050	+		AO353_22470	0.76	-0.7
4,930,050	+		AO353_22470	0.76	+0.3
4,930,050	+		AO353_22470	0.76	-0.1
4,930,051	-		AO353_22470	0.76	-0.2
4,930,051	-		AO353_22470	0.76	-0.7
4,930,051	-		AO353_22470	0.76	-0.6
4,930,051	-		AO353_22470	0.76	-0.4
4,930,051	-		AO353_22470	0.76	+0.8
4,930,051	-		AO353_22470	0.76	+0.2
4,930,051	-		AO353_22470	0.76	+1.5
4,930,051	-		AO353_22470	0.76	+0.8
4,930,051	-		AO353_22470	0.76	+0.7
4,930,051	-		AO353_22470	0.76	-0.2
4,930,180	+				-0.4
4,930,236	+				-0.0
4,930,236	+				-0.4
4,930,236	+				-0.1
4,930,236	+				-0.8
4,930,236	+				+0.1
4,930,236	+				+0.3
4,930,237	-				+1.3
4,930,237	-				+0.9
4,930,237	-				+0.4
4,930,241	+				-0.7
4,930,241	+				-0.6
4,930,265	+				+1.1
4,930,265	+				+0.7
4,930,265	+				-0.9
4,930,266	-				-0.8
4,930,376	-		AO353_22475	0.15	+0.1
4,930,376	-		AO353_22475	0.15	-2.6
4,930,403	+		AO353_22475	0.18	-1.4
4,930,403	+		AO353_22475	0.18	-0.7
4,930,404	-		AO353_22475	0.18	-0.7
4,930,475	+		AO353_22475	0.27	-0.8
4,930,475	+		AO353_22475	0.27	-0.3
4,930,475	+		AO353_22475	0.27	-0.7
4,930,476	-		AO353_22475	0.27	+0.1
4,930,476	-		AO353_22475	0.27	-0.6
4,930,651	-		AO353_22475	0.50	-0.2
4,931,173	+				-2.3
4,931,233	+				-0.1
4,931,234	-				-0.0
4,931,271	-				-0.2
4,931,271	-				+1.8
4,931,275	+				-0.5
4,931,275	+				+0.7
4,931,275	+				-3.2
4,931,275	+				-0.2
4,931,276	-				+0.1
4,931,276	-				+0.1
4,931,282	+				-1.1
4,931,282	+				+1.7
4,931,288	+				+0.5
4,931,288	+				-0.5
4,931,288	+				-0.2
4,931,288	+				+0.4
4,931,289	-				+1.5
4,931,289	-				+0.5
4,931,289	-				-0.1
4,931,295	+				+0.7
4,931,295	+				+1.0
4,931,295	+				-0.3
4,931,295	+				+0.8
4,931,295	+				-2.9
4,931,295	+				+0.2
4,931,295	+				+0.2
4,931,296	-				-0.5
4,931,296	-				+0.1
4,931,296	-				-0.3
4,931,296	-				-0.3
4,931,296	-				+0.0
4,931,296	-				+1.5
4,931,296	-				+0.0
4,931,296	-				+1.1
4,931,296	-				+1.3
4,931,296	-				+0.3
4,931,296	-				+1.0
4,931,296	-				+0.5
4,931,296	-				+0.7
4,931,296	-				+1.5
4,931,296	-				-0.1
4,931,297	+				-0.9
4,931,297	+				+0.6
4,931,298	-				+0.3
4,931,298	-				-0.1
4,931,298	-				+0.3
4,931,372	+				+0.0
4,931,372	+				+0.7
4,931,373	-				+0.0
4,931,373	-				+0.9
4,931,373	-				+0.5
4,931,374	+				-0.2
4,931,494	-		AO353_22480	0.15	+0.1
4,931,599	-		AO353_22480	0.23	-0.9
4,931,670	+		AO353_22480	0.29	-0.4
4,931,670	+		AO353_22480	0.29	+1.5
4,931,670	+		AO353_22480	0.29	+0.1
4,931,670	+		AO353_22480	0.29	-0.4
4,931,671	-		AO353_22480	0.29	+0.3
4,931,671	-		AO353_22480	0.29	-0.2
4,931,671	-		AO353_22480	0.29	+1.1
4,931,708	+		AO353_22480	0.32	+1.0
4,931,709	-		AO353_22480	0.32	-0.2
4,931,709	-		AO353_22480	0.32	-0.8
4,931,709	-		AO353_22480	0.32	+0.3
4,931,709	-		AO353_22480	0.32	+0.5
4,931,709	-		AO353_22480	0.32	-0.2
4,931,709	-		AO353_22480	0.32	-0.3
4,931,754	+		AO353_22480	0.35	+0.3
4,931,754	+		AO353_22480	0.35	-1.6
4,931,754	+		AO353_22480	0.35	-0.1
4,931,755	-		AO353_22480	0.35	+0.0
4,931,808	+		AO353_22480	0.40	+0.1
4,931,808	+		AO353_22480	0.40	+0.1
4,931,808	+		AO353_22480	0.40	-1.3
4,931,808	+		AO353_22480	0.40	-0.7
4,931,808	+		AO353_22480	0.40	+0.6
4,931,808	+		AO353_22480	0.40	+0.1
4,931,809	-				+0.9
4,931,832	+		AO353_22480	0.41	+0.9
4,931,832	+		AO353_22480	0.41	-0.5
4,931,833	-		AO353_22480	0.42	+0.1
4,931,833	-		AO353_22480	0.42	-1.3
4,931,833	-		AO353_22480	0.42	+0.4
4,931,833	-		AO353_22480	0.42	-1.7
4,931,841	+		AO353_22480	0.42	+0.3
4,931,842	-		AO353_22480	0.42	+0.3
4,931,842	-		AO353_22480	0.42	+1.0
4,931,842	-		AO353_22480	0.42	+0.7
4,931,862	+		AO353_22480	0.44	+0.9
4,931,863	-		AO353_22480	0.44	-1.0
4,931,895	+		AO353_22480	0.46	+0.3
4,931,896	-		AO353_22480	0.46	+1.9
4,931,901	+		AO353_22480	0.47	+0.9
4,931,901	+		AO353_22480	0.47	-1.4
4,931,902	-		AO353_22480	0.47	-1.8
4,931,902	-		AO353_22480	0.47	+1.2
4,931,902	-		AO353_22480	0.47	-0.4
4,931,955	+		AO353_22480	0.51	+0.2
4,931,955	+		AO353_22480	0.51	+1.5
4,931,955	+		AO353_22480	0.51	+0.5
4,931,955	+		AO353_22480	0.51	+1.3
4,931,955	+		AO353_22480	0.51	+0.1
4,931,955	+		AO353_22480	0.51	-0.3
4,931,955	+		AO353_22480	0.51	-0.3
4,931,955	+		AO353_22480	0.51	-0.0
4,931,956	-		AO353_22480	0.51	+0.5
4,931,956	-		AO353_22480	0.51	-0.2
4,931,956	-		AO353_22480	0.51	-1.4
4,931,956	-		AO353_22480	0.51	+0.2
4,931,988	+		AO353_22480	0.54	-0.1
4,931,988	+		AO353_22480	0.54	+0.3
4,931,988	+		AO353_22480	0.54	+0.1
4,931,989	-		AO353_22480	0.54	-1.6
4,931,989	-		AO353_22480	0.54	+0.3
4,931,989	-		AO353_22480	0.54	-2.5
4,932,002	+		AO353_22480	0.55	+1.7
4,932,002	+		AO353_22480	0.55	-0.5
4,932,002	+		AO353_22480	0.55	+0.2
4,932,002	+		AO353_22480	0.55	+0.5
4,932,002	+		AO353_22480	0.55	-0.3
4,932,002	+		AO353_22480	0.55	-0.2
4,932,002	+		AO353_22480	0.55	-0.9
4,932,002	+		AO353_22480	0.55	+0.2
4,932,002	+		AO353_22480	0.55	+0.2
4,932,003	-		AO353_22480	0.55	-0.8
4,932,003	-		AO353_22480	0.55	+0.8
4,932,003	-		AO353_22480	0.55	+0.1
4,932,003	-		AO353_22480	0.55	-0.2
4,932,003	-		AO353_22480	0.55	-0.4
4,932,003	-		AO353_22480	0.55	-2.1
4,932,025	+		AO353_22480	0.57	-0.9