Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20830

Experiment: D-Ribose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Ribose (C)
4,560,773	+				-2.0
4,560,773	+				-1.5
4,560,773	+				-4.0
4,560,774	-				-1.6
4,560,774	-				-2.7
4,560,798	+				-3.1
4,560,798	+				-2.2
4,560,798	+				-2.9
4,560,798	+				-3.2
4,560,798	+				-2.2
4,560,798	+				-4.0
4,560,798	+				-3.9
4,560,798	+				-0.6
4,560,799	-				-1.4
4,560,799	-				-3.5
4,560,799	-				-1.9
4,560,799	-				-1.2
4,560,799	-				-1.9
4,560,799	-				-1.6
4,560,801	+				-3.3
4,560,801	+				-2.2
4,560,801	+				-3.2
4,560,801	+				-2.8
4,560,802	-				-2.9
4,560,802	-				-4.0
4,560,826	+				-1.0
4,560,826	+				-2.4
4,560,826	+				-2.4
4,560,826	+				-1.7
4,560,826	+				-2.0
4,560,826	+				-1.1
4,560,826	+				-2.5
4,560,826	+				-3.2
4,560,826	+				-2.9
4,560,827	-				-3.8
4,560,827	-				-1.7
4,560,827	-				-2.5
4,560,827	-				-2.2
4,560,898	+		AO353_20825	0.13	-1.7
4,560,898	+		AO353_20825	0.13	-0.9
4,560,898	+		AO353_20825	0.13	-3.1
4,560,898	+		AO353_20825	0.13	-2.5
4,560,899	-		AO353_20825	0.13	-1.2
4,560,899	-		AO353_20825	0.13	-2.4
4,560,899	-		AO353_20825	0.13	-1.9
4,560,899	-		AO353_20825	0.13	-2.4
4,560,899	-		AO353_20825	0.13	-2.9
4,560,899	-		AO353_20825	0.13	-1.7
4,560,899	-		AO353_20825	0.13	-2.0
4,560,899	-		AO353_20825	0.13	-2.2
4,561,225	+		AO353_20825	0.47	-2.1
4,561,225	+		AO353_20825	0.47	-2.0
4,561,225	+		AO353_20825	0.47	-1.7
4,561,225	+				-0.4
4,561,225	+		AO353_20825	0.47	-3.2
4,561,225	+		AO353_20825	0.47	-2.2
4,561,225	+		AO353_20825	0.47	-1.7
4,561,226	-		AO353_20825	0.47	-2.9
4,561,226	-		AO353_20825	0.47	-2.1
4,561,226	-		AO353_20825	0.47	-2.1
4,561,226	-		AO353_20825	0.47	-1.7
4,561,226	-		AO353_20825	0.47	-2.8
4,561,226	-		AO353_20825	0.47	-2.5
4,561,226	-		AO353_20825	0.47	-2.6
4,561,272	+		AO353_20825	0.51	-1.7
4,561,272	+		AO353_20825	0.51	-2.2
4,561,273	-		AO353_20825	0.52	-2.4
4,561,273	-		AO353_20825	0.52	-1.8
4,561,305	+		AO353_20825	0.55	-0.8
4,561,306	-		AO353_20825	0.55	-1.4
4,561,415	-		AO353_20825	0.66	-3.8
4,561,523	+		AO353_20825	0.77	-1.5
4,561,523	+		AO353_20825	0.77	+0.3
4,561,524	-		AO353_20825	0.77	-1.4
4,561,524	-		AO353_20825	0.77	-3.8
4,561,714	+				-1.4
4,561,715	-				-2.0
4,561,715	-				-2.1
4,561,769	+				-2.2
4,561,769	+				-2.7
4,561,769	+				-0.9
4,561,769	+				-3.8
4,561,769	+				-1.0
4,561,769	+				-1.1
4,561,769	+				-2.0
4,561,769	+				-2.1
4,561,770	-				-2.6
4,561,770	-				-1.2
4,561,770	-				-3.8
4,561,770	-				-3.1
4,561,770	-				-2.9
4,561,770	-				-1.1
4,561,770	-				-3.6
4,561,770	-				-2.4
4,561,770	-				-2.0
4,561,770	-				-1.2
4,561,792	+				+0.1
4,561,792	+				-0.8
4,561,792	+				-1.7
4,561,793	-				-2.3
4,561,793	-				-3.8
4,561,882	+		AO353_20830	0.13	-3.8
4,561,883	-		AO353_20830	0.13	-2.1
4,561,883	-		AO353_20830	0.13	-2.4
4,561,883	-		AO353_20830	0.13	-2.1
4,561,932	+		AO353_20830	0.18	-1.2
4,561,933	-		AO353_20830	0.18	-0.7
4,561,933	-		AO353_20830	0.18	-2.9
4,561,933	-		AO353_20830	0.18	-2.4
4,561,990	-		AO353_20830	0.24	-1.2
4,562,000	-		AO353_20830	0.25	-2.9
4,562,000	-		AO353_20830	0.25	-1.4
4,562,068	+		AO353_20830	0.31	+0.3
4,562,068	+		AO353_20830	0.31	-0.2
4,562,192	+		AO353_20830	0.43	-2.2
4,562,216	+		AO353_20830	0.46	-1.7
4,562,217	-		AO353_20830	0.46	-3.1
4,562,234	-		AO353_20830	0.47	-3.1
4,562,234	-		AO353_20830	0.47	-2.2
4,562,242	+		AO353_20830	0.48	-1.0
4,562,243	-		AO353_20830	0.48	-2.3
4,562,243	-		AO353_20830	0.48	-2.4
4,562,243	-		AO353_20830	0.48	-4.2
4,562,243	-		AO353_20830	0.48	-2.3
4,562,243	-		AO353_20830	0.48	-2.7
4,562,243	-		AO353_20830	0.48	-3.8
4,562,292	+		AO353_20830	0.53	+0.3
4,562,292	+		AO353_20830	0.53	-1.9
4,562,310	+		AO353_20830	0.55	-0.9
4,562,310	+		AO353_20830	0.55	-0.2
4,562,310	+		AO353_20830	0.55	+0.5
4,562,310	+		AO353_20830	0.55	-2.7
4,562,311	-		AO353_20830	0.55	-2.5
4,562,311	-		AO353_20830	0.55	-3.1
4,562,311	-		AO353_20830	0.55	-1.2
4,562,311	-		AO353_20830	0.55	-3.5
4,562,311	-		AO353_20830	0.55	-0.4
4,562,311	-		AO353_20830	0.55	-1.4
4,562,501	+		AO353_20830	0.74	+0.3
4,562,584	+		AO353_20830	0.82	-1.0
4,562,584	+		AO353_20830	0.82	+0.5
4,562,584	+		AO353_20830	0.82	-0.8
4,562,585	-		AO353_20830	0.82	-2.0
4,562,585	-		AO353_20830	0.82	-1.0
4,562,651	+		AO353_20830	0.88	-0.4
4,562,652	-		AO353_20830	0.88	-1.6
4,562,751	-				-1.7
4,562,751	-				-2.7
4,562,784	+				-3.0
4,562,792	+				-2.5
4,562,792	+				-3.3
4,562,792	+				-3.1
4,562,792	+				-0.3
4,562,792	+				-2.4
4,562,792	+				-3.2
4,562,792	+				-1.9
4,562,792	+				-3.0
4,562,792	+				-1.7
4,562,792	+				-2.1
4,562,792	+				-2.0
4,562,792	+				-1.9
4,562,792	+				-1.6
4,562,792	+				-1.7
4,562,792	+				-3.2
4,562,792	+				-3.1
4,562,792	+				-2.1
4,562,792	+				-2.5
4,562,793	-				-3.7
4,562,793	-				-3.2
4,562,793	-				-2.8
4,562,793	-				-2.0
4,562,793	-				-2.7
4,562,793	-				-2.7
4,562,793	-				-1.6
4,562,793	-				-3.3
4,562,793	-				-2.8
4,562,793	-				-1.8
4,562,793	-				-1.7
4,562,793	-				-2.5
4,562,793	-				-2.4
4,562,807	-				-2.0
4,562,815	+				-2.0
4,562,815	+				-0.6
4,562,815	+				-2.5
4,562,816	-				-1.6
4,562,816	-				-2.8
4,562,816	-				-3.4
4,562,816	-				-1.7
4,562,816	-				-2.1
4,562,816	-				-3.5
4,563,234	+		AO353_20835	0.48	-2.2
4,563,234	+		AO353_20835	0.48	-1.7
4,563,234	+		AO353_20835	0.48	-3.0
4,563,235	-		AO353_20835	0.48	-3.3
4,563,235	-		AO353_20835	0.48	-2.0
4,563,235	-		AO353_20835	0.48	-1.0
4,563,235	-		AO353_20835	0.48	-1.1
4,563,235	-		AO353_20835	0.48	-1.7
4,563,235	-		AO353_20835	0.48	-2.7
4,563,333	+		AO353_20835	0.59	-2.3
4,563,333	+		AO353_20835	0.59	-1.2
4,563,333	+		AO353_20835	0.59	-2.5
4,563,688	+				+0.6
4,563,689	-				+0.0
4,563,689	-				-2.5
4,563,689	-				-2.1