Experiment: D-Ribose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18515 and AO353_18520 are separated by 87 nucleotides AO353_18520 and AO353_18525 are separated by 13 nucleotides AO353_18525 and AO353_18530 are separated by 0 nucleotides AO353_18530 and AO353_18535 are separated by 12 nucleotides
AO353_18515: AO353_18515 - septation protein A, at 4,075,072 to 4,075,668
_18515
AO353_18520: AO353_18520 - phosphoesterase, at 4,075,756 to 4,076,619
_18520
AO353_18525: AO353_18525 - hypothetical protein, at 4,076,633 to 4,077,262
_18525
AO353_18530: AO353_18530 - chromosome segregation protein ScpA, at 4,077,263 to 4,078,081
_18530
AO353_18535: AO353_18535 - segregation and condensation protein B, at 4,078,094 to 4,079,122
_18535
Position (kb)
4076
4077
4078 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4075.700 kb on - strand at 4075.700 kb on - strand at 4075.702 kb on + strand at 4075.702 kb on + strand at 4075.702 kb on + strand at 4075.702 kb on + strand at 4075.703 kb on - strand at 4075.703 kb on - strand at 4075.703 kb on - strand at 4075.711 kb on + strand at 4075.711 kb on + strand at 4075.711 kb on + strand at 4075.712 kb on - strand at 4075.712 kb on - strand at 4075.712 kb on - strand at 4075.712 kb on - strand at 4075.712 kb on - strand at 4075.712 kb on - strand at 4075.746 kb on - strand at 4075.779 kb on + strand at 4075.780 kb on - strand at 4075.953 kb on + strand, within AO353_18520 at 4075.953 kb on + strand, within AO353_18520 at 4075.953 kb on + strand, within AO353_18520 at 4075.954 kb on - strand, within AO353_18520 at 4075.954 kb on - strand, within AO353_18520 at 4076.125 kb on - strand, within AO353_18520 at 4076.183 kb on - strand, within AO353_18520 at 4076.183 kb on - strand, within AO353_18520 at 4076.183 kb on - strand, within AO353_18520 at 4076.183 kb on - strand, within AO353_18520 at 4076.183 kb on - strand, within AO353_18520 at 4076.347 kb on + strand, within AO353_18520 at 4076.347 kb on + strand, within AO353_18520 at 4076.347 kb on + strand, within AO353_18520 at 4076.347 kb on + strand, within AO353_18520 at 4076.389 kb on + strand, within AO353_18520 at 4076.389 kb on + strand, within AO353_18520 at 4076.389 kb on + strand, within AO353_18520 at 4076.390 kb on - strand, within AO353_18520 at 4076.390 kb on - strand, within AO353_18520 at 4076.391 kb on + strand, within AO353_18520 at 4076.391 kb on + strand, within AO353_18520 at 4076.391 kb on + strand, within AO353_18520 at 4076.391 kb on + strand, within AO353_18520 at 4076.391 kb on + strand, within AO353_18520 at 4076.392 kb on - strand, within AO353_18520 at 4076.392 kb on - strand, within AO353_18520 at 4076.392 kb on - strand, within AO353_18520 at 4076.392 kb on - strand, within AO353_18520 at 4076.392 kb on - strand, within AO353_18520 at 4076.392 kb on - strand, within AO353_18520 at 4076.463 kb on + strand, within AO353_18520 at 4076.464 kb on - strand, within AO353_18520 at 4076.464 kb on - strand, within AO353_18520 at 4076.546 kb on - strand at 4076.626 kb on - strand at 4076.626 kb on - strand at 4076.626 kb on - strand at 4076.626 kb on - strand at 4076.726 kb on + strand, within AO353_18525 at 4076.727 kb on - strand, within AO353_18525 at 4076.727 kb on - strand, within AO353_18525 at 4076.727 kb on - strand, within AO353_18525 at 4076.727 kb on - strand, within AO353_18525 at 4076.727 kb on - strand, within AO353_18525 at 4076.727 kb on - strand, within AO353_18525 at 4076.744 kb on + strand, within AO353_18525 at 4076.745 kb on - strand, within AO353_18525 at 4076.799 kb on + strand, within AO353_18525 at 4076.921 kb on + strand, within AO353_18525 at 4076.921 kb on + strand, within AO353_18525 at 4076.921 kb on + strand, within AO353_18525 at 4076.922 kb on - strand at 4076.929 kb on + strand, within AO353_18525 at 4076.930 kb on - strand, within AO353_18525 at 4076.930 kb on - strand, within AO353_18525 at 4076.930 kb on - strand, within AO353_18525 at 4077.166 kb on + strand, within AO353_18525 at 4077.260 kb on + strand at 4077.260 kb on + strand at 4077.260 kb on + strand at 4077.260 kb on + strand at 4077.260 kb on + strand at 4077.261 kb on - strand at 4077.261 kb on - strand at 4077.261 kb on - strand at 4077.261 kb on - strand at 4077.273 kb on + strand at 4077.273 kb on + strand at 4077.274 kb on - strand at 4077.329 kb on + strand at 4077.330 kb on - strand at 4077.330 kb on - strand at 4077.365 kb on + strand, within AO353_18530 at 4077.365 kb on + strand, within AO353_18530 at 4077.366 kb on - strand, within AO353_18530 at 4077.366 kb on - strand, within AO353_18530 at 4077.431 kb on + strand, within AO353_18530 at 4077.431 kb on + strand, within AO353_18530 at 4077.432 kb on - strand, within AO353_18530 at 4077.432 kb on - strand, within AO353_18530 at 4077.494 kb on + strand, within AO353_18530 at 4077.494 kb on + strand, within AO353_18530 at 4077.494 kb on + strand, within AO353_18530 at 4077.494 kb on + strand, within AO353_18530 at 4077.494 kb on + strand at 4077.495 kb on - strand, within AO353_18530 at 4077.495 kb on - strand, within AO353_18530 at 4077.495 kb on - strand, within AO353_18530 at 4077.495 kb on - strand, within AO353_18530 at 4077.495 kb on - strand, within AO353_18530 at 4077.495 kb on - strand, within AO353_18530 at 4077.495 kb on - strand, within AO353_18530 at 4077.495 kb on - strand, within AO353_18530 at 4077.503 kb on + strand, within AO353_18530 at 4077.503 kb on + strand, within AO353_18530 at 4077.503 kb on + strand, within AO353_18530 at 4077.503 kb on + strand, within AO353_18530 at 4077.503 kb on + strand, within AO353_18530 at 4077.504 kb on - strand, within AO353_18530 at 4077.504 kb on - strand, within AO353_18530 at 4077.504 kb on - strand, within AO353_18530 at 4077.548 kb on + strand, within AO353_18530 at 4077.668 kb on + strand, within AO353_18530 at 4077.668 kb on + strand, within AO353_18530 at 4077.668 kb on + strand, within AO353_18530 at 4077.839 kb on - strand, within AO353_18530 at 4077.839 kb on - strand, within AO353_18530 at 4077.839 kb on - strand, within AO353_18530 at 4077.839 kb on - strand, within AO353_18530 at 4077.989 kb on - strand, within AO353_18530 at 4078.181 kb on + strand at 4078.181 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Ribose (C) remove 4,075,700 - +0.0 4,075,700 - +0.4 4,075,702 + -0.5 4,075,702 + +0.0 4,075,702 + +0.1 4,075,702 + -1.4 4,075,703 - -0.1 4,075,703 - +0.1 4,075,703 - +0.5 4,075,711 + -0.8 4,075,711 + +0.3 4,075,711 + -1.2 4,075,712 - +0.3 4,075,712 - +1.0 4,075,712 - -0.4 4,075,712 - +0.7 4,075,712 - -0.2 4,075,712 - -0.6 4,075,746 - +0.1 4,075,779 + -1.0 4,075,780 - +0.7 4,075,953 + AO353_18520 0.23 +1.2 4,075,953 + AO353_18520 0.23 -1.1 4,075,953 + AO353_18520 0.23 -0.6 4,075,954 - AO353_18520 0.23 +0.2 4,075,954 - AO353_18520 0.23 -0.8 4,076,125 - AO353_18520 0.43 -0.4 4,076,183 - AO353_18520 0.49 +0.4 4,076,183 - AO353_18520 0.49 +0.7 4,076,183 - AO353_18520 0.49 -0.5 4,076,183 - AO353_18520 0.49 -0.4 4,076,183 - AO353_18520 0.49 +0.2 4,076,347 + AO353_18520 0.68 +1.3 4,076,347 + AO353_18520 0.68 -0.5 4,076,347 + AO353_18520 0.68 -0.1 4,076,347 + AO353_18520 0.68 -0.8 4,076,389 + AO353_18520 0.73 +0.1 4,076,389 + AO353_18520 0.73 +1.1 4,076,389 + AO353_18520 0.73 -0.4 4,076,390 - AO353_18520 0.73 -0.7 4,076,390 - AO353_18520 0.73 +0.2 4,076,391 + AO353_18520 0.73 +0.8 4,076,391 + AO353_18520 0.73 -0.5 4,076,391 + AO353_18520 0.73 -0.2 4,076,391 + AO353_18520 0.73 +0.5 4,076,391 + AO353_18520 0.73 -1.0 4,076,392 - AO353_18520 0.74 +0.2 4,076,392 - AO353_18520 0.74 -0.9 4,076,392 - AO353_18520 0.74 +0.8 4,076,392 - AO353_18520 0.74 +0.1 4,076,392 - AO353_18520 0.74 -0.6 4,076,392 - AO353_18520 0.74 -0.5 4,076,463 + AO353_18520 0.82 +0.0 4,076,464 - AO353_18520 0.82 -0.4 4,076,464 - AO353_18520 0.82 -0.3 4,076,546 - -0.6 4,076,626 - -0.2 4,076,626 - -1.3 4,076,626 - -1.4 4,076,626 - +1.4 4,076,726 + AO353_18525 0.15 -0.3 4,076,727 - AO353_18525 0.15 +0.1 4,076,727 - AO353_18525 0.15 -1.9 4,076,727 - AO353_18525 0.15 +0.6 4,076,727 - AO353_18525 0.15 -1.4 4,076,727 - AO353_18525 0.15 -1.4 4,076,727 - AO353_18525 0.15 -0.5 4,076,744 + AO353_18525 0.18 -1.1 4,076,745 - AO353_18525 0.18 -0.5 4,076,799 + AO353_18525 0.26 -1.5 4,076,921 + AO353_18525 0.46 -1.0 4,076,921 + AO353_18525 0.46 -0.5 4,076,921 + AO353_18525 0.46 -0.3 4,076,922 - +1.3 4,076,929 + AO353_18525 0.47 -3.0 4,076,930 - AO353_18525 0.47 -1.2 4,076,930 - AO353_18525 0.47 +0.2 4,076,930 - AO353_18525 0.47 -0.3 4,077,166 + AO353_18525 0.85 -0.3 4,077,260 + -0.8 4,077,260 + +1.7 4,077,260 + -0.6 4,077,260 + -0.6 4,077,260 + +0.8 4,077,261 - -0.1 4,077,261 - -0.0 4,077,261 - -0.3 4,077,261 - -1.0 4,077,273 + -0.7 4,077,273 + -0.5 4,077,274 - +0.5 4,077,329 + -0.7 4,077,330 - +1.2 4,077,330 - -0.1 4,077,365 + AO353_18530 0.12 +0.2 4,077,365 + AO353_18530 0.12 +1.2 4,077,366 - AO353_18530 0.13 +1.2 4,077,366 - AO353_18530 0.13 +0.9 4,077,431 + AO353_18530 0.21 +0.0 4,077,431 + AO353_18530 0.21 -0.5 4,077,432 - AO353_18530 0.21 +0.5 4,077,432 - AO353_18530 0.21 -1.2 4,077,494 + AO353_18530 0.28 -0.5 4,077,494 + AO353_18530 0.28 +0.2 4,077,494 + AO353_18530 0.28 -1.0 4,077,494 + AO353_18530 0.28 -0.3 4,077,494 + +1.7 4,077,495 - AO353_18530 0.28 -1.3 4,077,495 - AO353_18530 0.28 -0.2 4,077,495 - AO353_18530 0.28 +0.3 4,077,495 - AO353_18530 0.28 -1.2 4,077,495 - AO353_18530 0.28 -0.5 4,077,495 - AO353_18530 0.28 -0.5 4,077,495 - AO353_18530 0.28 +0.4 4,077,495 - AO353_18530 0.28 +0.6 4,077,503 + AO353_18530 0.29 -0.1 4,077,503 + AO353_18530 0.29 +0.5 4,077,503 + AO353_18530 0.29 +0.4 4,077,503 + AO353_18530 0.29 -0.6 4,077,503 + AO353_18530 0.29 +0.1 4,077,504 - AO353_18530 0.29 +0.7 4,077,504 - AO353_18530 0.29 +0.4 4,077,504 - AO353_18530 0.29 -0.0 4,077,548 + AO353_18530 0.35 -0.5 4,077,668 + AO353_18530 0.49 +0.4 4,077,668 + AO353_18530 0.49 -1.6 4,077,668 + AO353_18530 0.49 +0.2 4,077,839 - AO353_18530 0.70 -0.1 4,077,839 - AO353_18530 0.70 -1.3 4,077,839 - AO353_18530 0.70 +1.6 4,077,839 - AO353_18530 0.70 -0.3 4,077,989 - AO353_18530 0.89 +0.1 4,078,181 + -0.5 4,078,181 + -0.9
Or see this region's nucleotide sequence