Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_898
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
7,993 | + | Ac3H11_897 | 0.69 | +0.6 | |
7,993 | + | Ac3H11_897 | 0.69 | -0.8 | |
7,993 | + | Ac3H11_897 | 0.69 | -0.7 | |
7,993 | + | Ac3H11_897 | 0.69 | +0.4 | |
7,993 | + | Ac3H11_897 | 0.69 | -1.4 | |
7,994 | - | Ac3H11_897 | 0.69 | -0.1 | |
7,994 | - | Ac3H11_897 | 0.69 | -0.5 | |
7,994 | - | Ac3H11_897 | 0.69 | +0.6 | |
7,994 | - | Ac3H11_897 | 0.69 | -2.1 | |
7,994 | - | Ac3H11_897 | 0.69 | +0.2 | |
7,994 | - | Ac3H11_897 | 0.69 | +0.4 | |
8,155 | + | Ac3H11_897 | 0.78 | +0.4 | |
8,185 | + | Ac3H11_897 | 0.79 | -0.7 | |
8,221 | + | Ac3H11_897 | 0.81 | -0.6 | |
8,644 | + | -0.8 | |||
8,644 | + | +0.3 | |||
8,645 | - | -0.2 | |||
8,645 | - | -0.9 | |||
8,764 | + | -0.3 | |||
8,765 | - | -0.3 | |||
8,765 | - | -0.1 | |||
8,765 | - | +0.5 | |||
8,895 | - | +0.0 | |||
8,895 | - | +0.5 | |||
9,198 | + | +0.4 | |||
9,198 | + | -1.4 | |||
9,198 | + | -1.8 | |||
9,199 | - | -0.0 | |||
9,199 | - | +1.1 | |||
9,199 | - | -0.3 | |||
9,199 | - | +0.5 | |||
9,379 | + | +0.4 | |||
9,380 | - | -0.5 | |||
9,380 | - | -0.7 | |||
9,638 | + | Ac3H11_899 | 0.22 | +0.8 | |
9,638 | + | Ac3H11_899 | 0.22 | +1.0 | |
9,638 | + | Ac3H11_899 | 0.22 | -0.1 | |
9,673 | + | Ac3H11_899 | 0.23 | +0.9 | |
9,766 | + | Ac3H11_899 | 0.28 | -0.5 | |
9,766 | + | Ac3H11_899 | 0.28 | +1.2 | |
9,766 | + | Ac3H11_899 | 0.28 | -0.1 | |
9,767 | - | Ac3H11_899 | 0.28 | -1.2 | |
9,767 | - | Ac3H11_899 | 0.28 | +0.9 | |
9,767 | - | Ac3H11_899 | 0.28 | +0.5 | |
9,833 | + | Ac3H11_899 | 0.31 | -0.5 | |
9,834 | - | Ac3H11_899 | 0.31 | -0.1 | |
9,973 | + | Ac3H11_899 | 0.38 | +0.4 | |
9,973 | + | Ac3H11_899 | 0.38 | -1.0 | |
9,974 | - | Ac3H11_899 | 0.38 | +0.4 | |
9,974 | - | Ac3H11_899 | 0.38 | -0.6 | |
10,018 | + | Ac3H11_899 | 0.40 | -0.6 | |
10,018 | + | Ac3H11_899 | 0.40 | +0.3 | |
10,018 | + | Ac3H11_899 | 0.40 | +0.6 | |
10,019 | - | Ac3H11_899 | 0.40 | +0.2 | |
10,174 | + | Ac3H11_899 | 0.48 | -0.1 | |
10,175 | - | Ac3H11_899 | 0.48 | -0.9 | |
10,175 | - | Ac3H11_899 | 0.48 | -0.3 |
Or see this region's nucleotide sequence