Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4654 and Ac3H11_4655 are separated by 45 nucleotides Ac3H11_4655 and Ac3H11_4656 are separated by 3 nucleotides Ac3H11_4656 and Ac3H11_4657 are separated by 162 nucleotides Ac3H11_4657 and Ac3H11_4658 are separated by 193 nucleotides
Ac3H11_4654 - Organic hydroperoxide resistance protein, at 262,134 to 262,577
_4654
Ac3H11_4655 - Organic hydroperoxide resistance transcriptional regulator, at 262,623 to 263,087
_4655
Ac3H11_4656 - hypothetical protein, at 263,091 to 263,219
_4656
Ac3H11_4657 - Enoyl-CoA hydratase (EC 4.2.1.17), at 263,382 to 264,200
_4657
Ac3H11_4658 - 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157), at 264,394 to 265,242
_4658
Position (kb) 263
264
265 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 262.525 kb on + strand, within Ac3H11_4654 at 262.525 kb on + strand, within Ac3H11_4654 at 262.526 kb on - strand, within Ac3H11_4654 at 262.939 kb on + strand, within Ac3H11_4655 at 262.939 kb on + strand, within Ac3H11_4655 at 262.939 kb on + strand, within Ac3H11_4655 at 262.940 kb on - strand, within Ac3H11_4655 at 262.940 kb on - strand, within Ac3H11_4655 at 262.940 kb on - strand, within Ac3H11_4655 at 262.940 kb on - strand, within Ac3H11_4655 at 262.948 kb on + strand, within Ac3H11_4655 at 262.948 kb on + strand, within Ac3H11_4655 at 262.948 kb on + strand, within Ac3H11_4655 at 262.981 kb on + strand, within Ac3H11_4655 at 262.981 kb on + strand, within Ac3H11_4655 at 262.981 kb on + strand, within Ac3H11_4655 at 262.981 kb on + strand, within Ac3H11_4655 at 262.981 kb on + strand, within Ac3H11_4655 at 262.982 kb on - strand, within Ac3H11_4655 at 262.982 kb on - strand, within Ac3H11_4655 at 263.011 kb on + strand, within Ac3H11_4655 at 263.012 kb on - strand, within Ac3H11_4655 at 263.194 kb on + strand, within Ac3H11_4656 at 263.194 kb on + strand, within Ac3H11_4656 at 263.195 kb on - strand, within Ac3H11_4656 at 263.195 kb on - strand, within Ac3H11_4656 at 263.195 kb on - strand, within Ac3H11_4656 at 263.195 kb on - strand, within Ac3H11_4656 at 263.208 kb on + strand at 263.208 kb on + strand at 263.208 kb on + strand at 263.208 kb on + strand at 263.208 kb on + strand at 263.209 kb on - strand at 263.209 kb on - strand at 263.209 kb on - strand at 263.209 kb on - strand at 263.209 kb on - strand at 263.209 kb on - strand at 263.217 kb on + strand at 263.217 kb on + strand at 263.217 kb on + strand at 263.218 kb on - strand at 263.218 kb on - strand at 263.218 kb on - strand at 263.218 kb on - strand at 263.261 kb on - strand at 263.261 kb on - strand at 263.275 kb on - strand at 263.903 kb on - strand, within Ac3H11_4657 at 263.956 kb on + strand, within Ac3H11_4657 at 264.055 kb on + strand, within Ac3H11_4657 at 264.055 kb on + strand, within Ac3H11_4657 at 264.055 kb on + strand, within Ac3H11_4657 at 264.055 kb on + strand, within Ac3H11_4657 at 264.056 kb on - strand, within Ac3H11_4657 at 264.056 kb on - strand, within Ac3H11_4657 at 264.056 kb on - strand, within Ac3H11_4657 at 264.119 kb on + strand at 264.236 kb on + strand at 264.283 kb on + strand at 264.283 kb on + strand at 264.283 kb on + strand at 264.283 kb on + strand at 264.398 kb on + strand at 264.398 kb on + strand at 264.398 kb on + strand at 264.398 kb on + strand at 264.398 kb on + strand at 264.398 kb on + strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.399 kb on - strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.402 kb on + strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.403 kb on - strand at 264.404 kb on + strand at 264.404 kb on + strand at 264.404 kb on + strand at 264.404 kb on + strand at 264.404 kb on + strand at 264.404 kb on + strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.405 kb on - strand at 264.477 kb on - strand at 264.503 kb on + strand, within Ac3H11_4658 at 264.503 kb on + strand, within Ac3H11_4658 at 264.503 kb on + strand, within Ac3H11_4658 at 264.503 kb on + strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.504 kb on - strand, within Ac3H11_4658 at 264.962 kb on + strand, within Ac3H11_4658 at 264.962 kb on + strand, within Ac3H11_4658 at 264.962 kb on + strand, within Ac3H11_4658 at 265.143 kb on + strand, within Ac3H11_4658 at 265.143 kb on + strand, within Ac3H11_4658 at 265.143 kb on + strand, within Ac3H11_4658 at 265.144 kb on - strand, within Ac3H11_4658 at 265.144 kb on - strand, within Ac3H11_4658 at 265.144 kb on - strand, within Ac3H11_4658 at 265.144 kb on - strand, within Ac3H11_4658
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 262,525 + Ac3H11_4654 0.88 -0.7 262,525 + Ac3H11_4654 0.88 -0.9 262,526 - Ac3H11_4654 0.88 -0.2 262,939 + Ac3H11_4655 0.68 -0.2 262,939 + Ac3H11_4655 0.68 -1.9 262,939 + Ac3H11_4655 0.68 -0.6 262,940 - Ac3H11_4655 0.68 -0.8 262,940 - Ac3H11_4655 0.68 -0.6 262,940 - Ac3H11_4655 0.68 +0.1 262,940 - Ac3H11_4655 0.68 -1.0 262,948 + Ac3H11_4655 0.70 +0.3 262,948 + Ac3H11_4655 0.70 +0.9 262,948 + Ac3H11_4655 0.70 -0.6 262,981 + Ac3H11_4655 0.77 -0.7 262,981 + Ac3H11_4655 0.77 +0.0 262,981 + Ac3H11_4655 0.77 -1.0 262,981 + Ac3H11_4655 0.77 -1.3 262,981 + Ac3H11_4655 0.77 +0.2 262,982 - Ac3H11_4655 0.77 +0.3 262,982 - Ac3H11_4655 0.77 -0.8 263,011 + Ac3H11_4655 0.83 -1.4 263,012 - Ac3H11_4655 0.84 -2.9 263,194 + Ac3H11_4656 0.80 -0.6 263,194 + Ac3H11_4656 0.80 -0.5 263,195 - Ac3H11_4656 0.81 +0.5 263,195 - Ac3H11_4656 0.81 -0.5 263,195 - Ac3H11_4656 0.81 +0.3 263,195 - Ac3H11_4656 0.81 +0.9 263,208 + +0.2 263,208 + +0.1 263,208 + +1.1 263,208 + +0.6 263,208 + -1.5 263,209 - +0.6 263,209 - -0.1 263,209 - +0.2 263,209 - -0.6 263,209 - -1.3 263,209 - -1.3 263,217 + -0.7 263,217 + +0.7 263,217 + +0.1 263,218 - +0.8 263,218 - -1.1 263,218 - -0.5 263,218 - +0.5 263,261 - -0.9 263,261 - -0.0 263,275 - +0.5 263,903 - Ac3H11_4657 0.64 +0.1 263,956 + Ac3H11_4657 0.70 -0.8 264,055 + Ac3H11_4657 0.82 -0.4 264,055 + Ac3H11_4657 0.82 +0.2 264,055 + Ac3H11_4657 0.82 +0.1 264,055 + Ac3H11_4657 0.82 +0.8 264,056 - Ac3H11_4657 0.82 +0.5 264,056 - Ac3H11_4657 0.82 -1.1 264,056 - Ac3H11_4657 0.82 -0.6 264,119 + +0.7 264,236 + -0.0 264,283 + -1.5 264,283 + -0.4 264,283 + -0.7 264,283 + +0.6 264,398 + -0.6 264,398 + +0.7 264,398 + +0.0 264,398 + +1.2 264,398 + +0.0 264,398 + +0.0 264,399 - -0.2 264,399 - +0.0 264,399 - -0.8 264,399 - +0.5 264,399 - -0.2 264,399 - -1.1 264,399 - -0.2 264,399 - -0.2 264,399 - +0.4 264,399 - -0.9 264,399 - -0.4 264,399 - -0.4 264,399 - -0.8 264,399 - +0.6 264,399 - -0.1 264,399 - +1.3 264,399 - -0.5 264,402 + -0.4 264,402 + +0.4 264,402 + +0.0 264,402 + +0.3 264,402 + +0.7 264,402 + +0.5 264,402 + +0.7 264,402 + -0.5 264,402 + -2.2 264,402 + -0.5 264,402 + -0.4 264,402 + +0.5 264,402 + -1.6 264,402 + +0.6 264,402 + -0.4 264,402 + +0.0 264,402 + -0.3 264,402 + +0.7 264,402 + +0.3 264,402 + +1.2 264,402 + -0.4 264,402 + +0.1 264,402 + +0.7 264,402 + +0.2 264,402 + -2.7 264,402 + -0.4 264,402 + +0.2 264,403 - +0.0 264,403 - +0.5 264,403 - -0.0 264,403 - -0.2 264,403 - -0.7 264,403 - +0.4 264,403 - -0.1 264,403 - +0.5 264,403 - +0.1 264,403 - -0.3 264,403 - -0.2 264,403 - +0.5 264,403 - +0.1 264,403 - -0.8 264,403 - -0.1 264,403 - -0.6 264,403 - +0.0 264,403 - +0.5 264,403 - +1.7 264,403 - -0.7 264,403 - -1.9 264,403 - +0.3 264,404 + -0.7 264,404 + -1.2 264,404 + -0.3 264,404 + +0.1 264,404 + -0.3 264,404 + -1.2 264,405 - +0.4 264,405 - +0.5 264,405 - -0.4 264,405 - +0.3 264,405 - -0.2 264,405 - -0.1 264,405 - +0.9 264,405 - +1.9 264,405 - -0.3 264,405 - +0.4 264,477 - +0.5 264,503 + Ac3H11_4658 0.13 -1.1 264,503 + Ac3H11_4658 0.13 -0.6 264,503 + Ac3H11_4658 0.13 +0.3 264,503 + Ac3H11_4658 0.13 +0.9 264,504 - Ac3H11_4658 0.13 +0.5 264,504 - Ac3H11_4658 0.13 +0.3 264,504 - Ac3H11_4658 0.13 -1.5 264,504 - Ac3H11_4658 0.13 +0.3 264,504 - Ac3H11_4658 0.13 +0.3 264,504 - Ac3H11_4658 0.13 -0.0 264,504 - Ac3H11_4658 0.13 -0.4 264,504 - Ac3H11_4658 0.13 +1.3 264,962 + Ac3H11_4658 0.67 +0.4 264,962 + Ac3H11_4658 0.67 -0.2 264,962 + Ac3H11_4658 0.67 +0.4 265,143 + Ac3H11_4658 0.88 +0.3 265,143 + Ac3H11_4658 0.88 +0.3 265,143 + Ac3H11_4658 0.88 +0.7 265,144 - Ac3H11_4658 0.88 -0.5 265,144 - Ac3H11_4658 0.88 +1.1 265,144 - Ac3H11_4658 0.88 -0.4 265,144 - Ac3H11_4658 0.88 -0.1
Or see this region's nucleotide sequence