Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3754 and Ac3H11_3755 overlap by 4 nucleotides Ac3H11_3755 and Ac3H11_3756 are separated by 320 nucleotides Ac3H11_3756 and Ac3H11_3757 overlap by 4 nucleotides Ac3H11_3757 and Ac3H11_3758 are separated by 35 nucleotides Ac3H11_3758 and Ac3H11_3759 overlap by 4 nucleotides
Ac3H11_3754 - hypothetical protein, at 10,874 to 11,326
_3754
Ac3H11_3755 - hypothetical protein, at 11,323 to 11,568
_3755
Ac3H11_3756 - hypothetical protein, at 11,889 to 12,158
_3756
Ac3H11_3757 - hypothetical protein, at 12,155 to 12,337
_3757
Ac3H11_3758 - hypothetical protein, at 12,373 to 12,921
_3758
Ac3H11_3759 - hypothetical protein, at 12,918 to 13,538
_3759
Position (kb) 11
12
13 Strain fitness (log2 ratio) -1
0
1 at 11.575 kb on + strand at 11.804 kb on + strand at 11.969 kb on + strand, within Ac3H11_3756 at 12.258 kb on + strand, within Ac3H11_3757 at 12.258 kb on + strand, within Ac3H11_3757 at 12.359 kb on - strand at 12.555 kb on + strand, within Ac3H11_3758 at 12.555 kb on + strand, within Ac3H11_3758 at 12.702 kb on - strand, within Ac3H11_3758 at 12.702 kb on - strand, within Ac3H11_3758
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 11,575 + -1.0 11,804 + +0.1 11,969 + Ac3H11_3756 0.30 +0.8 12,258 + Ac3H11_3757 0.56 +1.0 12,258 + Ac3H11_3757 0.56 -0.7 12,359 - +0.7 12,555 + Ac3H11_3758 0.33 -0.2 12,555 + Ac3H11_3758 0.33 -0.1 12,702 - Ac3H11_3758 0.60 -0.5 12,702 - Ac3H11_3758 0.60 -0.3
Or see this region's nucleotide sequence