Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3462 and Ac3H11_3649 are separated by 50 nucleotides Ac3H11_3649 and Ac3H11_3650 are separated by 209 nucleotides Ac3H11_3650 and Ac3H11_3463 are separated by 62 nucleotides Ac3H11_3463 and Ac3H11_3464 are separated by 768 nucleotides
Ac3H11_3462 - Heat-inducible transcription repressor HrcA, at 13,684 to 14,688
_3462
Ac3H11_3649 - tRNA-Met-CAT, at 14,739 to 14,812
_3649
Ac3H11_3650 - tRNA-Arg-ACG, at 15,022 to 15,095
_3650
Ac3H11_3463 - Phage integrase, at 15,158 to 16,351
_3463
Ac3H11_3464 - hypothetical protein, at 17,120 to 17,512
_3464
Position (kb) 15
16
17 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 14.164 kb on + strand, within Ac3H11_3462 at 14.164 kb on + strand, within Ac3H11_3462 at 14.182 kb on - strand, within Ac3H11_3462 at 14.213 kb on - strand, within Ac3H11_3462 at 14.325 kb on - strand, within Ac3H11_3462 at 14.325 kb on - strand, within Ac3H11_3462 at 14.325 kb on - strand, within Ac3H11_3462 at 14.450 kb on + strand, within Ac3H11_3462 at 14.450 kb on + strand, within Ac3H11_3462 at 14.467 kb on - strand, within Ac3H11_3462 at 14.467 kb on - strand, within Ac3H11_3462 at 14.497 kb on + strand, within Ac3H11_3462 at 14.497 kb on + strand, within Ac3H11_3462 at 14.497 kb on + strand, within Ac3H11_3462 at 14.497 kb on + strand, within Ac3H11_3462 at 14.497 kb on + strand, within Ac3H11_3462 at 14.497 kb on + strand, within Ac3H11_3462 at 14.498 kb on - strand, within Ac3H11_3462 at 14.498 kb on - strand, within Ac3H11_3462 at 14.498 kb on - strand, within Ac3H11_3462 at 14.498 kb on - strand, within Ac3H11_3462 at 14.686 kb on + strand at 14.686 kb on + strand at 14.686 kb on + strand at 14.686 kb on + strand at 14.686 kb on + strand at 14.686 kb on + strand at 14.686 kb on + strand at 14.686 kb on + strand at 14.694 kb on + strand at 14.694 kb on + strand at 14.694 kb on + strand at 14.694 kb on + strand at 14.699 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.718 kb on + strand at 14.720 kb on + strand at 14.720 kb on + strand at 14.720 kb on + strand at 14.720 kb on + strand at 14.904 kb on + strand at 14.904 kb on + strand at 14.904 kb on + strand at 14.904 kb on + strand at 14.927 kb on + strand at 14.968 kb on + strand at 15.327 kb on + strand, within Ac3H11_3463 at 15.327 kb on + strand, within Ac3H11_3463 at 15.327 kb on + strand, within Ac3H11_3463 at 15.327 kb on + strand, within Ac3H11_3463 at 15.328 kb on - strand, within Ac3H11_3463 at 15.328 kb on - strand, within Ac3H11_3463 at 15.328 kb on - strand, within Ac3H11_3463 at 15.364 kb on + strand, within Ac3H11_3463 at 15.365 kb on - strand, within Ac3H11_3463 at 15.510 kb on + strand, within Ac3H11_3463 at 15.510 kb on + strand, within Ac3H11_3463 at 15.510 kb on + strand, within Ac3H11_3463 at 15.510 kb on + strand, within Ac3H11_3463 at 15.511 kb on - strand, within Ac3H11_3463 at 15.570 kb on + strand, within Ac3H11_3463 at 15.570 kb on + strand, within Ac3H11_3463 at 15.570 kb on + strand, within Ac3H11_3463 at 15.570 kb on + strand, within Ac3H11_3463 at 15.570 kb on + strand, within Ac3H11_3463 at 15.570 kb on + strand, within Ac3H11_3463 at 15.570 kb on + strand, within Ac3H11_3463 at 15.570 kb on + strand, within Ac3H11_3463 at 15.570 kb on + strand, within Ac3H11_3463 at 15.570 kb on + strand, within Ac3H11_3463 at 15.570 kb on + strand, within Ac3H11_3463 at 15.570 kb on + strand, within Ac3H11_3463 at 15.571 kb on - strand, within Ac3H11_3463 at 15.571 kb on - strand, within Ac3H11_3463 at 15.571 kb on - strand, within Ac3H11_3463 at 15.571 kb on - strand, within Ac3H11_3463 at 15.571 kb on - strand, within Ac3H11_3463 at 15.571 kb on - strand, within Ac3H11_3463 at 15.571 kb on - strand, within Ac3H11_3463 at 15.571 kb on - strand, within Ac3H11_3463 at 15.571 kb on - strand, within Ac3H11_3463 at 15.571 kb on - strand, within Ac3H11_3463 at 15.571 kb on - strand, within Ac3H11_3463 at 15.571 kb on - strand, within Ac3H11_3463 at 15.571 kb on - strand, within Ac3H11_3463 at 15.959 kb on + strand, within Ac3H11_3463 at 15.959 kb on + strand, within Ac3H11_3463 at 15.959 kb on + strand, within Ac3H11_3463 at 15.959 kb on + strand, within Ac3H11_3463 at 15.960 kb on - strand, within Ac3H11_3463 at 15.960 kb on - strand, within Ac3H11_3463 at 15.960 kb on - strand, within Ac3H11_3463 at 16.020 kb on + strand, within Ac3H11_3463 at 16.021 kb on - strand, within Ac3H11_3463 at 16.021 kb on - strand, within Ac3H11_3463 at 16.140 kb on + strand, within Ac3H11_3463 at 16.140 kb on + strand, within Ac3H11_3463 at 16.140 kb on + strand, within Ac3H11_3463 at 16.140 kb on + strand, within Ac3H11_3463 at 16.230 kb on - strand, within Ac3H11_3463 at 16.245 kb on + strand at 16.245 kb on + strand at 16.245 kb on + strand at 16.245 kb on + strand at 16.245 kb on + strand at 16.246 kb on - strand at 16.246 kb on - strand at 16.249 kb on + strand at 16.249 kb on + strand at 16.249 kb on + strand at 16.249 kb on + strand at 16.249 kb on + strand at 16.249 kb on + strand at 16.249 kb on + strand at 16.250 kb on - strand at 16.250 kb on - strand at 16.250 kb on - strand at 16.250 kb on - strand at 16.250 kb on - strand at 16.250 kb on - strand at 16.250 kb on - strand at 16.250 kb on - strand at 16.250 kb on - strand at 16.250 kb on - strand at 16.326 kb on + strand at 16.326 kb on + strand at 16.327 kb on - strand at 16.327 kb on - strand at 16.327 kb on - strand at 16.327 kb on - strand at 16.330 kb on + strand at 16.330 kb on + strand at 16.330 kb on + strand at 16.496 kb on + strand at 16.496 kb on + strand at 16.496 kb on + strand at 16.496 kb on + strand at 16.496 kb on + strand at 16.496 kb on + strand at 16.568 kb on + strand at 16.568 kb on - strand at 16.577 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.747 kb on + strand at 16.748 kb on - strand at 16.748 kb on - strand at 16.748 kb on - strand at 16.748 kb on - strand at 16.818 kb on + strand at 16.819 kb on - strand at 16.819 kb on - strand at 16.826 kb on + strand at 17.057 kb on + strand at 17.058 kb on - strand at 17.058 kb on - strand at 17.194 kb on + strand, within Ac3H11_3464 at 17.194 kb on + strand, within Ac3H11_3464
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 14,164 + Ac3H11_3462 0.48 +0.5 14,164 + Ac3H11_3462 0.48 -1.2 14,182 - Ac3H11_3462 0.50 -0.6 14,213 - Ac3H11_3462 0.53 -0.6 14,325 - Ac3H11_3462 0.64 +1.0 14,325 - Ac3H11_3462 0.64 -1.4 14,325 - Ac3H11_3462 0.64 -1.1 14,450 + Ac3H11_3462 0.76 -2.1 14,450 + Ac3H11_3462 0.76 -0.6 14,467 - Ac3H11_3462 0.78 -0.5 14,467 - Ac3H11_3462 0.78 -1.3 14,497 + Ac3H11_3462 0.81 -0.8 14,497 + Ac3H11_3462 0.81 -1.6 14,497 + Ac3H11_3462 0.81 +0.5 14,497 + Ac3H11_3462 0.81 -3.2 14,497 + Ac3H11_3462 0.81 -0.1 14,497 + Ac3H11_3462 0.81 +0.9 14,498 - Ac3H11_3462 0.81 -1.6 14,498 - Ac3H11_3462 0.81 +0.9 14,498 - Ac3H11_3462 0.81 -2.4 14,498 - Ac3H11_3462 0.81 -0.5 14,686 + +0.2 14,686 + -1.6 14,686 + -1.1 14,686 + -1.3 14,686 + +0.9 14,686 + +0.3 14,686 + +0.5 14,686 + -0.4 14,694 + +0.5 14,694 + +0.2 14,694 + +0.3 14,694 + -0.4 14,699 + +1.2 14,718 + +0.6 14,718 + -0.0 14,718 + -0.5 14,718 + +0.5 14,718 + +2.2 14,718 + +0.7 14,718 + +0.4 14,718 + +0.9 14,718 + -0.5 14,718 + +0.3 14,718 + +1.1 14,718 + -0.2 14,718 + +0.8 14,718 + +0.2 14,718 + +1.5 14,718 + +0.1 14,718 + -0.1 14,718 + +0.4 14,720 + +0.5 14,720 + +0.5 14,720 + +1.4 14,720 + -1.1 14,904 + -0.2 14,904 + -1.0 14,904 + -0.4 14,904 + -0.2 14,927 + +0.1 14,968 + -0.9 15,327 + Ac3H11_3463 0.14 -0.6 15,327 + Ac3H11_3463 0.14 -0.1 15,327 + Ac3H11_3463 0.14 -2.4 15,327 + Ac3H11_3463 0.14 +0.2 15,328 - Ac3H11_3463 0.14 +1.0 15,328 - Ac3H11_3463 0.14 +1.0 15,328 - Ac3H11_3463 0.14 +0.9 15,364 + Ac3H11_3463 0.17 -1.4 15,365 - Ac3H11_3463 0.17 +0.3 15,510 + Ac3H11_3463 0.29 +1.1 15,510 + Ac3H11_3463 0.29 +0.1 15,510 + Ac3H11_3463 0.29 -0.4 15,510 + Ac3H11_3463 0.29 +0.1 15,511 - Ac3H11_3463 0.30 +0.5 15,570 + Ac3H11_3463 0.35 -0.3 15,570 + Ac3H11_3463 0.35 -0.3 15,570 + Ac3H11_3463 0.35 +0.3 15,570 + Ac3H11_3463 0.35 -0.3 15,570 + Ac3H11_3463 0.35 +0.3 15,570 + Ac3H11_3463 0.35 -0.3 15,570 + Ac3H11_3463 0.35 +0.0 15,570 + Ac3H11_3463 0.35 -1.0 15,570 + Ac3H11_3463 0.35 +0.6 15,570 + Ac3H11_3463 0.35 +0.3 15,570 + Ac3H11_3463 0.35 +0.1 15,570 + Ac3H11_3463 0.35 -0.7 15,571 - Ac3H11_3463 0.35 -0.6 15,571 - Ac3H11_3463 0.35 +0.4 15,571 - Ac3H11_3463 0.35 -0.7 15,571 - Ac3H11_3463 0.35 +0.4 15,571 - Ac3H11_3463 0.35 -0.6 15,571 - Ac3H11_3463 0.35 +0.5 15,571 - Ac3H11_3463 0.35 -0.4 15,571 - Ac3H11_3463 0.35 +0.3 15,571 - Ac3H11_3463 0.35 -0.1 15,571 - Ac3H11_3463 0.35 +0.3 15,571 - Ac3H11_3463 0.35 -1.5 15,571 - Ac3H11_3463 0.35 -0.3 15,571 - Ac3H11_3463 0.35 +3.0 15,959 + Ac3H11_3463 0.67 -0.4 15,959 + Ac3H11_3463 0.67 -0.2 15,959 + Ac3H11_3463 0.67 +1.1 15,959 + Ac3H11_3463 0.67 +0.3 15,960 - Ac3H11_3463 0.67 +0.6 15,960 - Ac3H11_3463 0.67 +0.2 15,960 - Ac3H11_3463 0.67 -0.0 16,020 + Ac3H11_3463 0.72 +0.7 16,021 - Ac3H11_3463 0.72 +0.1 16,021 - Ac3H11_3463 0.72 +0.2 16,140 + Ac3H11_3463 0.82 +0.1 16,140 + Ac3H11_3463 0.82 +0.3 16,140 + Ac3H11_3463 0.82 -0.2 16,140 + Ac3H11_3463 0.82 +0.5 16,230 - Ac3H11_3463 0.90 -1.1 16,245 + +0.3 16,245 + +0.5 16,245 + +0.3 16,245 + +0.8 16,245 + +0.7 16,246 - -1.1 16,246 - -0.3 16,249 + +1.6 16,249 + +0.1 16,249 + +0.5 16,249 + +0.1 16,249 + +0.4 16,249 + +0.0 16,249 + -0.5 16,250 - +0.4 16,250 - -1.2 16,250 - +0.0 16,250 - -0.2 16,250 - +1.5 16,250 - -1.6 16,250 - +0.1 16,250 - -0.2 16,250 - +0.2 16,250 - -0.3 16,326 + +0.1 16,326 + -0.0 16,327 - +0.2 16,327 - -0.5 16,327 - -0.4 16,327 - -0.4 16,330 + +0.5 16,330 + +0.5 16,330 + -0.3 16,496 + -0.5 16,496 + -0.7 16,496 + +0.0 16,496 + +0.5 16,496 + -0.3 16,496 + -0.1 16,568 + -1.0 16,568 - +1.8 16,577 + +0.4 16,747 + -1.2 16,747 + -0.2 16,747 + -1.9 16,747 + -0.1 16,747 + +0.9 16,747 + -0.1 16,747 + -2.0 16,747 + -1.0 16,747 + +0.2 16,748 - -1.7 16,748 - -0.6 16,748 - +0.5 16,748 - -0.8 16,818 + -0.7 16,819 - -0.4 16,819 - +0.8 16,826 + +0.1 17,057 + +1.6 17,058 - -0.3 17,058 - -0.9 17,194 + Ac3H11_3464 0.19 -2.6 17,194 + Ac3H11_3464 0.19 -0.6
Or see this region's nucleotide sequence