Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_276 and Ac3H11_277 are separated by 30 nucleotides Ac3H11_277 and Ac3H11_278 are separated by 54 nucleotides Ac3H11_278 and Ac3H11_279 are separated by 100 nucleotides
Ac3H11_276 - Putative SAM-dependent methyltransferase Bucepa02006346, at 100,971 to 101,525
_276
Ac3H11_277 - 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7), at 101,556 to 102,455
_277
Ac3H11_278 - FIG002207: Probable transmembrane protein, at 102,510 to 103,604
_278
Ac3H11_279 - Metal-dependent hydrolases of the beta-lactamase superfamily I, at 103,705 to 104,502
_279
Position (kb) 102
103
104 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 101.519 kb on + strand at 101.519 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.523 kb on + strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.524 kb on - strand at 101.536 kb on + strand at 101.536 kb on + strand at 101.579 kb on + strand at 101.579 kb on + strand at 101.634 kb on + strand at 101.666 kb on + strand, within Ac3H11_277 at 101.889 kb on + strand, within Ac3H11_277 at 101.889 kb on + strand, within Ac3H11_277 at 101.889 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.892 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 101.973 kb on + strand, within Ac3H11_277 at 102.106 kb on + strand, within Ac3H11_277 at 102.106 kb on + strand, within Ac3H11_277 at 102.106 kb on + strand, within Ac3H11_277 at 102.126 kb on + strand, within Ac3H11_277 at 102.126 kb on + strand, within Ac3H11_277 at 102.126 kb on + strand, within Ac3H11_277 at 103.602 kb on + strand at 103.602 kb on + strand at 103.602 kb on + strand at 103.602 kb on + strand at 103.603 kb on - strand at 103.603 kb on - strand at 103.603 kb on - strand at 103.672 kb on - strand at 103.934 kb on - strand, within Ac3H11_279 at 104.275 kb on + strand, within Ac3H11_279 at 104.276 kb on - strand, within Ac3H11_279 at 104.276 kb on - strand, within Ac3H11_279 at 104.330 kb on + strand, within Ac3H11_279 at 104.330 kb on + strand, within Ac3H11_279 at 104.330 kb on + strand, within Ac3H11_279 at 104.330 kb on + strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279 at 104.331 kb on - strand, within Ac3H11_279
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 101,519 + +0.7 101,519 + +0.4 101,523 + -1.6 101,523 + +0.2 101,523 + -0.6 101,523 + +0.8 101,523 + -0.8 101,523 + -2.1 101,523 + +0.3 101,523 + +0.2 101,523 + -1.5 101,523 + -0.1 101,524 - +0.9 101,524 - -0.6 101,524 - +0.3 101,524 - +0.2 101,524 - +0.3 101,524 - +2.2 101,524 - +0.5 101,524 - -1.3 101,524 - +0.3 101,524 - +0.0 101,524 - -1.0 101,524 - +0.6 101,524 - +0.0 101,524 - +0.4 101,536 + -1.7 101,536 + +0.0 101,579 + -0.7 101,579 + -0.1 101,634 + -0.5 101,666 + Ac3H11_277 0.12 -0.0 101,889 + Ac3H11_277 0.37 -1.0 101,889 + Ac3H11_277 0.37 +0.1 101,889 + Ac3H11_277 0.37 -1.3 101,892 + Ac3H11_277 0.37 -1.4 101,892 + Ac3H11_277 0.37 -0.5 101,892 + Ac3H11_277 0.37 -0.6 101,892 + Ac3H11_277 0.37 -0.6 101,892 + Ac3H11_277 0.37 +0.1 101,892 + Ac3H11_277 0.37 -0.6 101,973 + Ac3H11_277 0.46 -0.5 101,973 + Ac3H11_277 0.46 -2.6 101,973 + Ac3H11_277 0.46 +0.4 101,973 + Ac3H11_277 0.46 +0.6 101,973 + Ac3H11_277 0.46 -0.4 101,973 + Ac3H11_277 0.46 -2.1 102,106 + Ac3H11_277 0.61 -0.6 102,106 + Ac3H11_277 0.61 -0.9 102,106 + Ac3H11_277 0.61 -1.0 102,126 + Ac3H11_277 0.63 -0.5 102,126 + Ac3H11_277 0.63 -1.2 102,126 + Ac3H11_277 0.63 -0.1 103,602 + -0.2 103,602 + -0.5 103,602 + -3.3 103,602 + +0.0 103,603 - +0.0 103,603 - +0.3 103,603 - +0.2 103,672 - -1.2 103,934 - Ac3H11_279 0.29 +0.1 104,275 + Ac3H11_279 0.71 +1.2 104,276 - Ac3H11_279 0.72 +1.3 104,276 - Ac3H11_279 0.72 +0.9 104,330 + Ac3H11_279 0.78 -1.1 104,330 + Ac3H11_279 0.78 +0.5 104,330 + Ac3H11_279 0.78 +1.3 104,330 + Ac3H11_279 0.78 +0.6 104,331 - Ac3H11_279 0.78 +1.2 104,331 - Ac3H11_279 0.78 -0.1 104,331 - Ac3H11_279 0.78 +0.7 104,331 - Ac3H11_279 0.78 +1.2 104,331 - Ac3H11_279 0.78 +0.6 104,331 - Ac3H11_279 0.78 +0.4 104,331 - Ac3H11_279 0.78 +0.5 104,331 - Ac3H11_279 0.78 +1.5
Or see this region's nucleotide sequence