Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2616 and Ac3H11_2617 are separated by 410 nucleotides Ac3H11_2617 and Ac3H11_2618 are separated by 7 nucleotides Ac3H11_2618 and Ac3H11_2619 are separated by 47 nucleotides
Ac3H11_2616 - Argininosuccinate synthase (EC 6.3.4.5), at 898,336 to 899,673
_2616
Ac3H11_2617 - hypothetical protein, at 900,084 to 900,428
_2617
Ac3H11_2618 - sensory box histidine kinase/response regulator, at 900,436 to 902,847
_2618
Ac3H11_2619 - UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158), at 902,895 to 903,944
_2619
Position (kb) 900
901
902
903 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 899.700 kb on + strand at 899.887 kb on + strand at 899.887 kb on + strand at 899.887 kb on + strand at 899.909 kb on + strand at 899.909 kb on + strand at 899.909 kb on + strand at 899.910 kb on - strand at 899.910 kb on - strand at 899.910 kb on - strand at 899.960 kb on + strand at 899.960 kb on + strand at 899.960 kb on + strand at 899.960 kb on + strand at 899.961 kb on - strand at 899.961 kb on - strand at 899.961 kb on - strand at 899.978 kb on - strand at 899.978 kb on - strand at 899.978 kb on - strand at 899.978 kb on - strand at 900.071 kb on - strand at 900.071 kb on - strand at 900.071 kb on - strand at 900.107 kb on + strand at 900.107 kb on + strand at 900.122 kb on + strand, within Ac3H11_2617 at 900.123 kb on - strand, within Ac3H11_2617 at 900.123 kb on - strand, within Ac3H11_2617 at 900.123 kb on - strand, within Ac3H11_2617 at 900.132 kb on + strand, within Ac3H11_2617 at 900.132 kb on + strand, within Ac3H11_2617 at 900.133 kb on - strand, within Ac3H11_2617 at 900.133 kb on - strand, within Ac3H11_2617 at 900.133 kb on - strand, within Ac3H11_2617 at 900.133 kb on - strand, within Ac3H11_2617 at 900.147 kb on - strand, within Ac3H11_2617 at 900.147 kb on - strand, within Ac3H11_2617 at 900.231 kb on + strand, within Ac3H11_2617 at 900.231 kb on + strand, within Ac3H11_2617 at 900.314 kb on - strand, within Ac3H11_2617 at 900.342 kb on + strand, within Ac3H11_2617 at 900.342 kb on + strand, within Ac3H11_2617 at 900.342 kb on + strand, within Ac3H11_2617 at 900.343 kb on - strand, within Ac3H11_2617 at 900.343 kb on - strand, within Ac3H11_2617 at 900.343 kb on - strand, within Ac3H11_2617 at 900.353 kb on + strand, within Ac3H11_2617 at 900.353 kb on + strand, within Ac3H11_2617 at 900.353 kb on + strand, within Ac3H11_2617 at 900.356 kb on + strand, within Ac3H11_2617 at 900.356 kb on + strand, within Ac3H11_2617 at 900.356 kb on + strand, within Ac3H11_2617 at 900.356 kb on + strand, within Ac3H11_2617 at 900.356 kb on + strand, within Ac3H11_2617 at 900.357 kb on - strand, within Ac3H11_2617 at 900.357 kb on - strand, within Ac3H11_2617 at 900.357 kb on - strand, within Ac3H11_2617 at 900.357 kb on - strand, within Ac3H11_2617 at 900.357 kb on - strand, within Ac3H11_2617 at 900.357 kb on - strand, within Ac3H11_2617 at 900.381 kb on + strand, within Ac3H11_2617 at 900.381 kb on + strand, within Ac3H11_2617 at 900.381 kb on + strand, within Ac3H11_2617 at 900.381 kb on + strand, within Ac3H11_2617 at 900.382 kb on - strand, within Ac3H11_2617 at 900.382 kb on - strand, within Ac3H11_2617 at 900.382 kb on - strand, within Ac3H11_2617 at 900.382 kb on - strand, within Ac3H11_2617 at 900.384 kb on + strand, within Ac3H11_2617 at 900.385 kb on - strand, within Ac3H11_2617 at 900.385 kb on - strand, within Ac3H11_2617 at 900.385 kb on - strand, within Ac3H11_2617 at 900.445 kb on + strand at 900.463 kb on + strand at 900.463 kb on + strand at 900.464 kb on - strand at 900.464 kb on - strand at 900.464 kb on - strand at 900.470 kb on + strand at 900.471 kb on - strand at 900.471 kb on - strand at 900.471 kb on - strand at 900.471 kb on - strand at 900.534 kb on + strand at 900.534 kb on + strand at 900.569 kb on + strand at 900.569 kb on + strand at 900.569 kb on + strand at 900.570 kb on - strand at 900.585 kb on + strand at 900.723 kb on + strand, within Ac3H11_2618 at 900.723 kb on + strand, within Ac3H11_2618 at 900.723 kb on + strand, within Ac3H11_2618 at 900.724 kb on - strand, within Ac3H11_2618 at 900.724 kb on - strand, within Ac3H11_2618 at 900.724 kb on - strand, within Ac3H11_2618 at 900.724 kb on - strand, within Ac3H11_2618 at 900.769 kb on + strand, within Ac3H11_2618 at 900.777 kb on + strand, within Ac3H11_2618 at 900.778 kb on - strand, within Ac3H11_2618 at 900.778 kb on - strand, within Ac3H11_2618 at 900.778 kb on - strand, within Ac3H11_2618 at 900.824 kb on + strand, within Ac3H11_2618 at 900.824 kb on + strand, within Ac3H11_2618 at 900.825 kb on - strand, within Ac3H11_2618 at 900.938 kb on + strand, within Ac3H11_2618 at 900.938 kb on + strand, within Ac3H11_2618 at 900.938 kb on + strand, within Ac3H11_2618 at 900.938 kb on + strand, within Ac3H11_2618 at 900.939 kb on - strand, within Ac3H11_2618 at 900.939 kb on - strand, within Ac3H11_2618 at 900.939 kb on - strand, within Ac3H11_2618 at 900.939 kb on - strand, within Ac3H11_2618 at 900.939 kb on - strand, within Ac3H11_2618 at 900.939 kb on - strand, within Ac3H11_2618 at 901.119 kb on - strand, within Ac3H11_2618 at 901.255 kb on + strand, within Ac3H11_2618 at 901.255 kb on + strand, within Ac3H11_2618 at 901.256 kb on - strand, within Ac3H11_2618 at 901.256 kb on - strand, within Ac3H11_2618 at 901.256 kb on - strand, within Ac3H11_2618 at 901.472 kb on + strand, within Ac3H11_2618 at 901.485 kb on + strand, within Ac3H11_2618 at 901.485 kb on + strand, within Ac3H11_2618 at 901.486 kb on - strand, within Ac3H11_2618 at 901.486 kb on - strand, within Ac3H11_2618 at 901.749 kb on - strand, within Ac3H11_2618 at 901.821 kb on + strand, within Ac3H11_2618 at 901.821 kb on + strand, within Ac3H11_2618 at 901.963 kb on + strand, within Ac3H11_2618 at 901.963 kb on + strand, within Ac3H11_2618 at 901.963 kb on + strand, within Ac3H11_2618 at 901.964 kb on - strand, within Ac3H11_2618 at 901.964 kb on - strand, within Ac3H11_2618 at 901.964 kb on - strand, within Ac3H11_2618 at 901.964 kb on - strand, within Ac3H11_2618 at 901.964 kb on - strand, within Ac3H11_2618 at 901.964 kb on - strand, within Ac3H11_2618 at 902.305 kb on - strand, within Ac3H11_2618 at 902.415 kb on + strand, within Ac3H11_2618 at 902.415 kb on + strand, within Ac3H11_2618 at 902.415 kb on + strand, within Ac3H11_2618 at 902.416 kb on - strand, within Ac3H11_2618 at 902.519 kb on - strand, within Ac3H11_2618 at 902.671 kb on - strand at 902.671 kb on - strand at 902.671 kb on - strand at 902.707 kb on + strand at 902.707 kb on + strand at 902.707 kb on + strand at 902.707 kb on + strand at 902.707 kb on + strand at 902.707 kb on + strand at 902.708 kb on - strand at 902.708 kb on - strand at 902.708 kb on - strand at 902.708 kb on - strand at 902.708 kb on - strand at 902.708 kb on - strand at 902.709 kb on + strand at 902.709 kb on + strand at 902.709 kb on + strand at 902.709 kb on + strand at 902.709 kb on + strand at 902.710 kb on - strand at 902.710 kb on - strand at 902.710 kb on - strand at 902.710 kb on - strand at 902.710 kb on - strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.711 kb on + strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.712 kb on - strand at 902.763 kb on - strand at 902.783 kb on + strand at 902.784 kb on - strand at 902.784 kb on - strand at 902.784 kb on - strand at 902.784 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 899,700 + -0.4 899,887 + +0.6 899,887 + +0.0 899,887 + -0.3 899,909 + -0.1 899,909 + +0.4 899,909 + -1.8 899,910 - +0.5 899,910 - +0.8 899,910 - -0.3 899,960 + -0.2 899,960 + +0.9 899,960 + -2.6 899,960 + -1.9 899,961 - +0.9 899,961 - +0.1 899,961 - -0.2 899,978 - +0.9 899,978 - +0.6 899,978 - +0.2 899,978 - +0.4 900,071 - -0.3 900,071 - +0.1 900,071 - -0.5 900,107 + -0.2 900,107 + -0.1 900,122 + Ac3H11_2617 0.11 -3.4 900,123 - Ac3H11_2617 0.11 +0.3 900,123 - Ac3H11_2617 0.11 -0.8 900,123 - Ac3H11_2617 0.11 +0.9 900,132 + Ac3H11_2617 0.14 +0.1 900,132 + Ac3H11_2617 0.14 -0.3 900,133 - Ac3H11_2617 0.14 -0.6 900,133 - Ac3H11_2617 0.14 +0.0 900,133 - Ac3H11_2617 0.14 +1.1 900,133 - Ac3H11_2617 0.14 -0.4 900,147 - Ac3H11_2617 0.18 +0.0 900,147 - Ac3H11_2617 0.18 +0.2 900,231 + Ac3H11_2617 0.43 -0.5 900,231 + Ac3H11_2617 0.43 +0.3 900,314 - Ac3H11_2617 0.67 -0.3 900,342 + Ac3H11_2617 0.75 -0.8 900,342 + Ac3H11_2617 0.75 +0.8 900,342 + Ac3H11_2617 0.75 -0.6 900,343 - Ac3H11_2617 0.75 -0.1 900,343 - Ac3H11_2617 0.75 -0.2 900,343 - Ac3H11_2617 0.75 +0.7 900,353 + Ac3H11_2617 0.78 -3.4 900,353 + Ac3H11_2617 0.78 +0.3 900,353 + Ac3H11_2617 0.78 -0.9 900,356 + Ac3H11_2617 0.79 -1.1 900,356 + Ac3H11_2617 0.79 +1.6 900,356 + Ac3H11_2617 0.79 -1.6 900,356 + Ac3H11_2617 0.79 -0.4 900,356 + Ac3H11_2617 0.79 -0.9 900,357 - Ac3H11_2617 0.79 +0.7 900,357 - Ac3H11_2617 0.79 -0.1 900,357 - Ac3H11_2617 0.79 -0.1 900,357 - Ac3H11_2617 0.79 -1.2 900,357 - Ac3H11_2617 0.79 -1.3 900,357 - Ac3H11_2617 0.79 -0.2 900,381 + Ac3H11_2617 0.86 +0.6 900,381 + Ac3H11_2617 0.86 -0.1 900,381 + Ac3H11_2617 0.86 -0.6 900,381 + Ac3H11_2617 0.86 -0.4 900,382 - Ac3H11_2617 0.86 +1.1 900,382 - Ac3H11_2617 0.86 +0.5 900,382 - Ac3H11_2617 0.86 -1.1 900,382 - Ac3H11_2617 0.86 +0.5 900,384 + Ac3H11_2617 0.87 -0.5 900,385 - Ac3H11_2617 0.87 -1.0 900,385 - Ac3H11_2617 0.87 +0.8 900,385 - Ac3H11_2617 0.87 +0.0 900,445 + +0.4 900,463 + +0.4 900,463 + +2.5 900,464 - +0.4 900,464 - -1.8 900,464 - -0.4 900,470 + +0.1 900,471 - -1.7 900,471 - +1.7 900,471 - -0.0 900,471 - +0.2 900,534 + -0.8 900,534 + -0.6 900,569 + +0.1 900,569 + -1.3 900,569 + +0.5 900,570 - +0.5 900,585 + -0.9 900,723 + Ac3H11_2618 0.12 -0.9 900,723 + Ac3H11_2618 0.12 -0.8 900,723 + Ac3H11_2618 0.12 -1.7 900,724 - Ac3H11_2618 0.12 -0.7 900,724 - Ac3H11_2618 0.12 +0.8 900,724 - Ac3H11_2618 0.12 +0.6 900,724 - Ac3H11_2618 0.12 +1.6 900,769 + Ac3H11_2618 0.14 -0.1 900,777 + Ac3H11_2618 0.14 -0.6 900,778 - Ac3H11_2618 0.14 +1.3 900,778 - Ac3H11_2618 0.14 -0.2 900,778 - Ac3H11_2618 0.14 +0.8 900,824 + Ac3H11_2618 0.16 -1.0 900,824 + Ac3H11_2618 0.16 +0.7 900,825 - Ac3H11_2618 0.16 -1.0 900,938 + Ac3H11_2618 0.21 -0.3 900,938 + Ac3H11_2618 0.21 -0.3 900,938 + Ac3H11_2618 0.21 +0.6 900,938 + Ac3H11_2618 0.21 +1.6 900,939 - Ac3H11_2618 0.21 +0.4 900,939 - Ac3H11_2618 0.21 -1.3 900,939 - Ac3H11_2618 0.21 -1.0 900,939 - Ac3H11_2618 0.21 +0.8 900,939 - Ac3H11_2618 0.21 -1.8 900,939 - Ac3H11_2618 0.21 +0.3 901,119 - Ac3H11_2618 0.28 +0.1 901,255 + Ac3H11_2618 0.34 +0.4 901,255 + Ac3H11_2618 0.34 +0.4 901,256 - Ac3H11_2618 0.34 -0.3 901,256 - Ac3H11_2618 0.34 +1.1 901,256 - Ac3H11_2618 0.34 +0.2 901,472 + Ac3H11_2618 0.43 +0.2 901,485 + Ac3H11_2618 0.43 -0.4 901,485 + Ac3H11_2618 0.43 -0.5 901,486 - Ac3H11_2618 0.44 -0.9 901,486 - Ac3H11_2618 0.44 +0.2 901,749 - Ac3H11_2618 0.54 -0.5 901,821 + Ac3H11_2618 0.57 -0.4 901,821 + Ac3H11_2618 0.57 -2.4 901,963 + Ac3H11_2618 0.63 -0.0 901,963 + Ac3H11_2618 0.63 -0.8 901,963 + Ac3H11_2618 0.63 -0.0 901,964 - Ac3H11_2618 0.63 +0.0 901,964 - Ac3H11_2618 0.63 -0.5 901,964 - Ac3H11_2618 0.63 +0.0 901,964 - Ac3H11_2618 0.63 -0.3 901,964 - Ac3H11_2618 0.63 -0.2 901,964 - Ac3H11_2618 0.63 +0.1 902,305 - Ac3H11_2618 0.77 -0.5 902,415 + Ac3H11_2618 0.82 +0.6 902,415 + Ac3H11_2618 0.82 +0.3 902,415 + Ac3H11_2618 0.82 -0.7 902,416 - Ac3H11_2618 0.82 +0.5 902,519 - Ac3H11_2618 0.86 -0.8 902,671 - +1.4 902,671 - +0.2 902,671 - -1.2 902,707 + +0.3 902,707 + +0.0 902,707 + +0.2 902,707 + -0.8 902,707 + +0.1 902,707 + -0.2 902,708 - -1.3 902,708 - -1.7 902,708 - -0.8 902,708 - -0.7 902,708 - -1.6 902,708 - +0.8 902,709 + -0.4 902,709 + -0.7 902,709 + +0.7 902,709 + -0.6 902,709 + -0.2 902,710 - +0.3 902,710 - +0.7 902,710 - +0.3 902,710 - -1.0 902,710 - +0.1 902,711 + -1.3 902,711 + -0.1 902,711 + -0.8 902,711 + -1.9 902,711 + +0.5 902,711 + -0.3 902,711 + +0.8 902,711 + +0.1 902,711 + +0.2 902,711 + +0.4 902,711 + -0.5 902,711 + +0.8 902,711 + +2.3 902,711 + -0.1 902,711 + -0.5 902,711 + -0.7 902,711 + -0.7 902,712 - -0.5 902,712 - -1.3 902,712 - +0.8 902,712 - -0.6 902,712 - +0.4 902,712 - -0.0 902,712 - -0.1 902,712 - +0.7 902,712 - -0.8 902,712 - +0.9 902,712 - -1.2 902,712 - -0.5 902,712 - +0.6 902,712 - -1.6 902,712 - -1.5 902,712 - +0.0 902,712 - +0.2 902,712 - -0.8 902,712 - +0.6 902,712 - +0.3 902,763 - +0.3 902,783 + -1.1 902,784 - -1.4 902,784 - -0.2 902,784 - -0.2 902,784 - -0.5
Or see this region's nucleotide sequence