Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2082 and Ac3H11_2083 are separated by 38 nucleotides Ac3H11_2083 and Ac3H11_2084 are separated by 234 nucleotides Ac3H11_2084 and Ac3H11_2085 are separated by 133 nucleotides
Ac3H11_2082 - Phosphogluconate dehydratase (EC 4.2.1.12), at 307,523 to 309,292
_2082
Ac3H11_2083 - 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14), at 309,331 to 309,960
_2083
Ac3H11_2084 - protein of unknown function DUF805, at 310,195 to 310,497
_2084
Ac3H11_2085 - hypothetical protein, at 310,631 to 311,494
_2085
Position (kb) 309
310 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 309.290 kb on + strand at 309.290 kb on + strand at 309.290 kb on + strand at 309.291 kb on - strand at 309.291 kb on - strand at 309.291 kb on - strand at 309.291 kb on - strand at 309.291 kb on - strand at 309.303 kb on - strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.314 kb on + strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.315 kb on - strand at 309.318 kb on + strand at 309.318 kb on + strand at 309.318 kb on + strand at 309.318 kb on + strand at 309.319 kb on - strand at 309.393 kb on - strand at 309.808 kb on - strand at 309.829 kb on + strand, within Ac3H11_2083 at 309.829 kb on + strand, within Ac3H11_2083 at 309.981 kb on + strand at 310.016 kb on - strand at 310.028 kb on - strand at 310.127 kb on - strand at 310.195 kb on - strand at 310.234 kb on + strand, within Ac3H11_2084 at 310.234 kb on + strand, within Ac3H11_2084 at 310.336 kb on + strand, within Ac3H11_2084 at 310.337 kb on - strand, within Ac3H11_2084 at 310.337 kb on - strand, within Ac3H11_2084 at 310.337 kb on - strand, within Ac3H11_2084 at 310.465 kb on + strand, within Ac3H11_2084 at 310.465 kb on + strand, within Ac3H11_2084 at 310.465 kb on + strand, within Ac3H11_2084 at 310.465 kb on + strand, within Ac3H11_2084 at 310.465 kb on + strand, within Ac3H11_2084 at 310.466 kb on - strand, within Ac3H11_2084 at 310.466 kb on - strand, within Ac3H11_2084 at 310.466 kb on - strand, within Ac3H11_2084 at 310.668 kb on + strand at 310.669 kb on - strand at 310.669 kb on - strand at 310.669 kb on - strand at 310.713 kb on + strand at 310.713 kb on + strand at 310.713 kb on + strand at 310.713 kb on + strand at 310.713 kb on + strand at 310.713 kb on + strand at 310.714 kb on - strand at 310.714 kb on - strand at 310.714 kb on - strand at 310.714 kb on - strand at 310.759 kb on - strand, within Ac3H11_2085 at 310.918 kb on - strand, within Ac3H11_2085
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 309,290 + +0.7 309,290 + -1.4 309,290 + +0.3 309,291 - +0.2 309,291 - -1.1 309,291 - +0.6 309,291 - -0.6 309,291 - -1.3 309,303 - -0.4 309,314 + -0.7 309,314 + +0.5 309,314 + +0.8 309,314 + +0.5 309,314 + +1.0 309,314 + +0.2 309,314 + -1.0 309,314 + +1.2 309,314 + +0.9 309,315 - -1.6 309,315 - +0.2 309,315 - +0.4 309,315 - -1.5 309,315 - +0.1 309,315 - +1.1 309,315 - +0.3 309,315 - +0.5 309,318 + +0.0 309,318 + +0.0 309,318 + +0.6 309,318 + +0.4 309,319 - +0.6 309,393 - -0.3 309,808 - +0.6 309,829 + Ac3H11_2083 0.79 -0.3 309,829 + Ac3H11_2083 0.79 -1.1 309,981 + -0.6 310,016 - +1.1 310,028 - +0.1 310,127 - +0.7 310,195 - +0.6 310,234 + Ac3H11_2084 0.13 +0.2 310,234 + Ac3H11_2084 0.13 +0.9 310,336 + Ac3H11_2084 0.47 +0.4 310,337 - Ac3H11_2084 0.47 -1.7 310,337 - Ac3H11_2084 0.47 -0.3 310,337 - Ac3H11_2084 0.47 -1.6 310,465 + Ac3H11_2084 0.89 -0.8 310,465 + Ac3H11_2084 0.89 -1.0 310,465 + Ac3H11_2084 0.89 -0.7 310,465 + Ac3H11_2084 0.89 +1.0 310,465 + Ac3H11_2084 0.89 +0.0 310,466 - Ac3H11_2084 0.89 +0.8 310,466 - Ac3H11_2084 0.89 -1.1 310,466 - Ac3H11_2084 0.89 +0.1 310,668 + -0.9 310,669 - +0.8 310,669 - +0.3 310,669 - -1.1 310,713 + +0.2 310,713 + +1.0 310,713 + -0.3 310,713 + +0.4 310,713 + +0.6 310,713 + -3.1 310,714 - +0.9 310,714 - -0.8 310,714 - -0.2 310,714 - +1.4 310,759 - Ac3H11_2085 0.15 -0.1 310,918 - Ac3H11_2085 0.33 -1.7
Or see this region's nucleotide sequence