Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1582

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_1581 and Ac3H11_1582 are separated by 103 nucleotidesAc3H11_1582 and Ac3H11_1583 are separated by 110 nucleotidesAc3H11_1583 and Ac3H11_1584 are separated by 34 nucleotides Ac3H11_1581 - Phosphate:acyl-ACP acyltransferase PlsX, at 162,572 to 163,624 _1581 Ac3H11_1582 - LSU ribosomal protein L32p, at 163,728 to 163,910 _1582 Ac3H11_1583 - COG1399 protein, clustered with ribosomal protein L32p, at 164,021 to 164,596 _1583 Ac3H11_1584 - Septum formation protein Maf, at 164,631 to 165,194 _1584 Position (kb) 163 164Strain fitness (log2 ratio) -3 -2 -1 0 1at 163.666 kb on - strandat 163.666 kb on - strandat 163.666 kb on - strandat 163.666 kb on - strandat 163.692 kb on + strandat 163.693 kb on - strandat 163.693 kb on - strandat 163.693 kb on - strandat 163.693 kb on - strandat 163.693 kb on - strandat 163.701 kb on - strandat 163.701 kb on - strandat 163.701 kb on - strandat 163.701 kb on - strandat 163.701 kb on - strandat 163.701 kb on - strandat 163.701 kb on - strandat 163.931 kb on - strandat 163.931 kb on - strandat 163.931 kb on - strandat 164.313 kb on - strand, within Ac3H11_1583at 164.401 kb on + strand, within Ac3H11_1583at 164.402 kb on - strand, within Ac3H11_1583at 164.478 kb on + strand, within Ac3H11_1583at 164.479 kb on - strand, within Ac3H11_1583at 164.479 kb on - strand, within Ac3H11_1583at 164.479 kb on - strand, within Ac3H11_1583at 164.560 kb on - strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.580 kb on + strandat 164.581 kb on - strandat 164.581 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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163,666 - -0.8
163,666 - -0.8
163,666 - +0.3
163,666 - +0.1
163,692 + -0.7
163,693 - -0.0
163,693 - +0.5
163,693 - +1.4
163,693 - +1.1
163,693 - +0.3
163,701 - -0.2
163,701 - +0.3
163,701 - -1.1
163,701 - -0.7
163,701 - +0.8
163,701 - -1.4
163,701 - +0.5
163,931 - -0.4
163,931 - -1.1
163,931 - -0.6
164,313 - Ac3H11_1583 0.51 -1.3
164,401 + Ac3H11_1583 0.66 -1.6
164,402 - Ac3H11_1583 0.66 -2.2
164,478 + Ac3H11_1583 0.79 -1.0
164,479 - Ac3H11_1583 0.80 -2.6
164,479 - Ac3H11_1583 0.80 -1.5
164,479 - Ac3H11_1583 0.80 -1.9
164,560 - -3.2
164,580 + +0.3
164,580 + -0.5
164,580 + +0.1
164,580 + +0.0
164,580 + -0.6
164,580 + -0.5
164,580 + +0.4
164,580 + +0.7
164,580 + +0.3
164,580 + +0.7
164,580 + -0.4
164,580 + +1.7
164,580 + +0.1
164,580 + +0.6
164,580 + +0.9
164,581 - +0.5
164,581 - +0.3

Or see this region's nucleotide sequence