Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1581 and Ac3H11_1582 are separated by 103 nucleotides Ac3H11_1582 and Ac3H11_1583 are separated by 110 nucleotides Ac3H11_1583 and Ac3H11_1584 are separated by 34 nucleotides
Ac3H11_1581 - Phosphate:acyl-ACP acyltransferase PlsX, at 162,572 to 163,624
_1581
Ac3H11_1582 - LSU ribosomal protein L32p, at 163,728 to 163,910
_1582
Ac3H11_1583 - COG1399 protein, clustered with ribosomal protein L32p, at 164,021 to 164,596
_1583
Ac3H11_1584 - Septum formation protein Maf, at 164,631 to 165,194
_1584
Position (kb)
163
164 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 163.666 kb on - strand at 163.666 kb on - strand at 163.666 kb on - strand at 163.666 kb on - strand at 163.692 kb on + strand at 163.693 kb on - strand at 163.693 kb on - strand at 163.693 kb on - strand at 163.693 kb on - strand at 163.693 kb on - strand at 163.701 kb on - strand at 163.701 kb on - strand at 163.701 kb on - strand at 163.701 kb on - strand at 163.701 kb on - strand at 163.701 kb on - strand at 163.701 kb on - strand at 163.931 kb on - strand at 163.931 kb on - strand at 163.931 kb on - strand at 164.313 kb on - strand, within Ac3H11_1583 at 164.401 kb on + strand, within Ac3H11_1583 at 164.402 kb on - strand, within Ac3H11_1583 at 164.478 kb on + strand, within Ac3H11_1583 at 164.479 kb on - strand, within Ac3H11_1583 at 164.479 kb on - strand, within Ac3H11_1583 at 164.479 kb on - strand, within Ac3H11_1583 at 164.560 kb on - strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.580 kb on + strand at 164.581 kb on - strand at 164.581 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 163,666 - -0.8 163,666 - -0.8 163,666 - +0.3 163,666 - +0.1 163,692 + -0.7 163,693 - -0.0 163,693 - +0.5 163,693 - +1.4 163,693 - +1.1 163,693 - +0.3 163,701 - -0.2 163,701 - +0.3 163,701 - -1.1 163,701 - -0.7 163,701 - +0.8 163,701 - -1.4 163,701 - +0.5 163,931 - -0.4 163,931 - -1.1 163,931 - -0.6 164,313 - Ac3H11_1583 0.51 -1.3 164,401 + Ac3H11_1583 0.66 -1.6 164,402 - Ac3H11_1583 0.66 -2.2 164,478 + Ac3H11_1583 0.79 -1.0 164,479 - Ac3H11_1583 0.80 -2.6 164,479 - Ac3H11_1583 0.80 -1.5 164,479 - Ac3H11_1583 0.80 -1.9 164,560 - -3.2 164,580 + +0.3 164,580 + -0.5 164,580 + +0.1 164,580 + +0.0 164,580 + -0.6 164,580 + -0.5 164,580 + +0.4 164,580 + +0.7 164,580 + +0.3 164,580 + +0.7 164,580 + -0.4 164,580 + +1.7 164,580 + +0.1 164,580 + +0.6 164,580 + +0.9 164,581 - +0.5 164,581 - +0.3
Or see this region's nucleotide sequence