Experiment: Benzethonium chloride 0.003 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS22500 and AZOBR_RS22505 are separated by 14 nucleotides AZOBR_RS22505 and AZOBR_RS22510 are separated by 176 nucleotides
AZOBR_RS22500: AZOBR_RS22500 - methylmalonate-semialdehyde dehydrogenase, at 58,726 to 60,225
_RS22500
AZOBR_RS22505: AZOBR_RS22505 - omega amino acid--pyruvate aminotransferase, at 60,240 to 61,550
_RS22505
AZOBR_RS22510: AZOBR_RS22510 - LysR family transcriptional regulator, at 61,727 to 62,689
_RS22510
Position (kb) 60
61
62 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 59.526 kb on - strand, within AZOBR_RS22500 at 59.526 kb on - strand, within AZOBR_RS22500 at 59.531 kb on + strand, within AZOBR_RS22500 at 59.532 kb on - strand, within AZOBR_RS22500 at 59.895 kb on - strand, within AZOBR_RS22500 at 60.353 kb on - strand at 60.448 kb on + strand, within AZOBR_RS22505 at 60.448 kb on + strand, within AZOBR_RS22505 at 60.449 kb on - strand, within AZOBR_RS22505 at 60.449 kb on - strand, within AZOBR_RS22505 at 60.449 kb on - strand, within AZOBR_RS22505 at 60.464 kb on + strand, within AZOBR_RS22505 at 60.465 kb on - strand, within AZOBR_RS22505 at 60.604 kb on + strand, within AZOBR_RS22505 at 60.605 kb on - strand, within AZOBR_RS22505 at 60.605 kb on - strand, within AZOBR_RS22505 at 60.611 kb on - strand, within AZOBR_RS22505 at 60.634 kb on + strand, within AZOBR_RS22505 at 60.634 kb on + strand, within AZOBR_RS22505 at 60.634 kb on + strand, within AZOBR_RS22505 at 60.634 kb on + strand, within AZOBR_RS22505 at 60.635 kb on - strand, within AZOBR_RS22505 at 60.635 kb on - strand, within AZOBR_RS22505 at 60.635 kb on - strand, within AZOBR_RS22505 at 60.635 kb on - strand, within AZOBR_RS22505 at 60.667 kb on + strand, within AZOBR_RS22505 at 60.668 kb on - strand, within AZOBR_RS22505 at 61.183 kb on + strand, within AZOBR_RS22505 at 61.330 kb on + strand, within AZOBR_RS22505 at 61.330 kb on + strand, within AZOBR_RS22505 at 61.331 kb on - strand, within AZOBR_RS22505 at 61.331 kb on - strand, within AZOBR_RS22505 at 61.331 kb on - strand, within AZOBR_RS22505 at 61.424 kb on - strand at 61.703 kb on - strand at 61.718 kb on + strand at 61.719 kb on - strand at 61.719 kb on - strand at 61.722 kb on + strand at 61.723 kb on - strand at 61.723 kb on - strand at 62.276 kb on + strand, within AZOBR_RS22510 at 62.277 kb on - strand, within AZOBR_RS22510 at 62.277 kb on - strand, within AZOBR_RS22510 at 62.465 kb on + strand, within AZOBR_RS22510 at 62.466 kb on - strand, within AZOBR_RS22510 at 62.490 kb on - strand, within AZOBR_RS22510 at 62.549 kb on + strand, within AZOBR_RS22510
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.003 mM remove 59,526 - AZOBR_RS22500 0.53 +0.4 59,526 - AZOBR_RS22500 0.53 +0.6 59,531 + AZOBR_RS22500 0.54 +0.6 59,532 - AZOBR_RS22500 0.54 +0.2 59,895 - AZOBR_RS22500 0.78 +0.6 60,353 - -0.4 60,448 + AZOBR_RS22505 0.16 -0.2 60,448 + AZOBR_RS22505 0.16 -0.0 60,449 - AZOBR_RS22505 0.16 -0.3 60,449 - AZOBR_RS22505 0.16 +0.9 60,449 - AZOBR_RS22505 0.16 -2.7 60,464 + AZOBR_RS22505 0.17 +0.4 60,465 - AZOBR_RS22505 0.17 -0.1 60,604 + AZOBR_RS22505 0.28 -0.6 60,605 - AZOBR_RS22505 0.28 -0.3 60,605 - AZOBR_RS22505 0.28 -0.1 60,611 - AZOBR_RS22505 0.28 +1.3 60,634 + AZOBR_RS22505 0.30 +1.2 60,634 + AZOBR_RS22505 0.30 -0.0 60,634 + AZOBR_RS22505 0.30 -0.7 60,634 + AZOBR_RS22505 0.30 +0.4 60,635 - AZOBR_RS22505 0.30 -0.1 60,635 - AZOBR_RS22505 0.30 -1.2 60,635 - AZOBR_RS22505 0.30 -2.1 60,635 - AZOBR_RS22505 0.30 +1.3 60,667 + AZOBR_RS22505 0.33 +0.8 60,668 - AZOBR_RS22505 0.33 +0.4 61,183 + AZOBR_RS22505 0.72 +0.1 61,330 + AZOBR_RS22505 0.83 +0.9 61,330 + AZOBR_RS22505 0.83 -0.3 61,331 - AZOBR_RS22505 0.83 -0.0 61,331 - AZOBR_RS22505 0.83 +0.2 61,331 - AZOBR_RS22505 0.83 +0.1 61,424 - -1.2 61,703 - -1.9 61,718 + -1.3 61,719 - +0.8 61,719 - -3.6 61,722 + +0.4 61,723 - +0.5 61,723 - -1.4 62,276 + AZOBR_RS22510 0.57 -0.2 62,277 - AZOBR_RS22510 0.57 -1.8 62,277 - AZOBR_RS22510 0.57 -0.5 62,465 + AZOBR_RS22510 0.77 -1.2 62,466 - AZOBR_RS22510 0.77 -0.2 62,490 - AZOBR_RS22510 0.79 +0.2 62,549 + AZOBR_RS22510 0.85 -2.6
Or see this region's nucleotide sequence