Experiment: Benzethonium chloride 0.003 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS10355 and AZOBR_RS10360 are separated by 107 nucleotides AZOBR_RS10360 and AZOBR_RS10365 are separated by 30 nucleotides AZOBR_RS10365 and AZOBR_RS10370 are separated by 252 nucleotides AZOBR_RS10370 and AZOBR_RS10375 are separated by 380 nucleotides
AZOBR_RS10355: AZOBR_RS10355 - membrane protein, at 2,176,963 to 2,177,427
_RS10355
AZOBR_RS10360: AZOBR_RS10360 - tRNA-Ala, at 2,177,535 to 2,177,610
_RS10360
AZOBR_RS10365: AZOBR_RS10365 - tRNA-Leu, at 2,177,641 to 2,177,727
_RS10365
AZOBR_RS10370: AZOBR_RS10370 - hypothetical protein, at 2,177,980 to 2,180,157
_RS10370
AZOBR_RS10375: AZOBR_RS10375 - glyceraldehyde-3-phosphate dehydrogenase, at 2,180,538 to 2,181,545
_RS10375
Position (kb)
2177
2178
2179
2180
2181 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2177.053 kb on + strand, within AZOBR_RS10355 at 2177.317 kb on + strand, within AZOBR_RS10355 at 2177.613 kb on + strand at 2177.616 kb on - strand at 2177.616 kb on - strand at 2177.777 kb on + strand at 2177.779 kb on + strand at 2177.865 kb on - strand at 2178.248 kb on + strand, within AZOBR_RS10370 at 2178.248 kb on + strand, within AZOBR_RS10370 at 2178.248 kb on + strand, within AZOBR_RS10370 at 2178.249 kb on - strand, within AZOBR_RS10370 at 2178.249 kb on - strand, within AZOBR_RS10370 at 2178.249 kb on - strand, within AZOBR_RS10370 at 2178.249 kb on - strand, within AZOBR_RS10370 at 2178.251 kb on + strand, within AZOBR_RS10370 at 2178.251 kb on + strand, within AZOBR_RS10370 at 2178.252 kb on - strand, within AZOBR_RS10370 at 2178.867 kb on - strand, within AZOBR_RS10370 at 2178.918 kb on + strand, within AZOBR_RS10370 at 2178.918 kb on + strand, within AZOBR_RS10370 at 2179.070 kb on + strand, within AZOBR_RS10370 at 2179.070 kb on + strand, within AZOBR_RS10370 at 2179.071 kb on - strand, within AZOBR_RS10370 at 2179.071 kb on - strand, within AZOBR_RS10370 at 2179.071 kb on - strand, within AZOBR_RS10370 at 2179.071 kb on - strand, within AZOBR_RS10370 at 2179.071 kb on - strand, within AZOBR_RS10370 at 2179.304 kb on + strand, within AZOBR_RS10370 at 2179.305 kb on - strand, within AZOBR_RS10370 at 2179.305 kb on - strand, within AZOBR_RS10370 at 2179.305 kb on - strand, within AZOBR_RS10370 at 2179.305 kb on - strand, within AZOBR_RS10370 at 2179.359 kb on - strand, within AZOBR_RS10370 at 2180.937 kb on + strand, within AZOBR_RS10375 at 2181.082 kb on - strand, within AZOBR_RS10375 at 2181.082 kb on - strand, within AZOBR_RS10375
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.003 mM remove 2,177,053 + AZOBR_RS10355 0.19 +0.7 2,177,317 + AZOBR_RS10355 0.76 -0.9 2,177,613 + -1.8 2,177,616 - +0.5 2,177,616 - +0.6 2,177,777 + +1.1 2,177,779 + -1.6 2,177,865 - -0.6 2,178,248 + AZOBR_RS10370 0.12 +0.8 2,178,248 + AZOBR_RS10370 0.12 +1.6 2,178,248 + AZOBR_RS10370 0.12 -0.8 2,178,249 - AZOBR_RS10370 0.12 +0.8 2,178,249 - AZOBR_RS10370 0.12 -0.5 2,178,249 - AZOBR_RS10370 0.12 +1.8 2,178,249 - AZOBR_RS10370 0.12 -0.5 2,178,251 + AZOBR_RS10370 0.12 -0.2 2,178,251 + AZOBR_RS10370 0.12 -0.4 2,178,252 - AZOBR_RS10370 0.12 +0.4 2,178,867 - AZOBR_RS10370 0.41 -0.9 2,178,918 + AZOBR_RS10370 0.43 +1.6 2,178,918 + AZOBR_RS10370 0.43 +0.8 2,179,070 + AZOBR_RS10370 0.50 -0.5 2,179,070 + AZOBR_RS10370 0.50 +1.3 2,179,071 - AZOBR_RS10370 0.50 -0.5 2,179,071 - AZOBR_RS10370 0.50 -0.4 2,179,071 - AZOBR_RS10370 0.50 +0.7 2,179,071 - AZOBR_RS10370 0.50 +1.5 2,179,071 - AZOBR_RS10370 0.50 +0.9 2,179,304 + AZOBR_RS10370 0.61 +0.3 2,179,305 - AZOBR_RS10370 0.61 -0.1 2,179,305 - AZOBR_RS10370 0.61 +0.6 2,179,305 - AZOBR_RS10370 0.61 +0.1 2,179,305 - AZOBR_RS10370 0.61 -0.2 2,179,359 - AZOBR_RS10370 0.63 -2.8 2,180,937 + AZOBR_RS10375 0.40 +0.6 2,181,082 - AZOBR_RS10375 0.54 +1.4 2,181,082 - AZOBR_RS10375 0.54 +0.3
Or see this region's nucleotide sequence