Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09255

Experiment: R2A with Nickel (II) chloride 0.3125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Nickel (II) chloride 0.3125 mM
2,026,973	+				+0.5
2,026,974	-				-0.8
2,026,974	-				-0.8
2,026,974	-				-1.3
2,027,009	+				-1.1
2,027,009	+				-1.9
2,027,009	+				-0.9
2,027,009	+				+0.2
2,027,009	+				-0.7
2,027,009	+				-0.6
2,027,009	+				-0.7
2,027,009	+				-0.5
2,027,009	+				+0.2
2,027,010	-				+2.0
2,027,010	-				+0.6
2,027,010	-				-2.3
2,027,010	-				+0.7
2,027,010	-				-0.6
2,027,010	-				-0.1
2,027,010	-				+0.6
2,027,010	-				+0.9
2,027,010	-				+0.6
2,027,114	+				-0.9
2,027,114	+				-0.2
2,027,114	+				-0.2
2,027,114	+				-1.5
2,027,114	+				+0.0
2,027,114	+				-1.3
2,027,114	+				-1.0
2,027,114	+				-2.6
2,027,114	+				-0.5
2,027,114	+				-2.4
2,027,114	+				-1.9
2,027,115	-				-1.7
2,027,115	-				+0.1
2,027,115	-				-2.1
2,027,115	-				-0.5
2,027,115	-				+0.0
2,027,115	-				-1.6
2,027,115	-				-1.8
2,027,201	+		LRK54_RS09250	0.21	-1.8
2,027,211	+		LRK54_RS09250	0.23	-2.6
2,027,211	+		LRK54_RS09250	0.23	-2.0
2,027,211	+		LRK54_RS09250	0.23	-2.1
2,027,212	-		LRK54_RS09250	0.23	-0.8
2,027,212	-		LRK54_RS09250	0.23	-0.3
2,027,212	-		LRK54_RS09250	0.23	-0.8
2,027,212	-		LRK54_RS09250	0.23	-2.6
2,027,212	-		LRK54_RS09250	0.23	-1.9
2,027,212	-		LRK54_RS09250	0.23	-0.9
2,027,274	+		LRK54_RS09250	0.32	+1.0
2,027,274	+		LRK54_RS09250	0.32	+0.3
2,027,274	+		LRK54_RS09250	0.32	-0.1
2,027,274	+		LRK54_RS09250	0.32	-1.8
2,027,275	-		LRK54_RS09250	0.32	+0.5
2,027,275	-		LRK54_RS09250	0.32	-1.9
2,027,396	+		LRK54_RS09250	0.50	+1.8
2,027,396	+		LRK54_RS09250	0.50	+0.3
2,027,397	-		LRK54_RS09250	0.50	-2.4
2,027,397	-		LRK54_RS09250	0.50	-0.8
2,027,497	+		LRK54_RS09250	0.64	-2.3
2,027,497	+		LRK54_RS09250	0.64	-0.9
2,027,497	+		LRK54_RS09250	0.64	-1.9
2,027,497	+		LRK54_RS09250	0.64	-0.7
2,027,497	+		LRK54_RS09250	0.64	+0.7
2,027,497	+		LRK54_RS09250	0.64	-0.4
2,027,497	+		LRK54_RS09250	0.64	-1.7
2,027,497	+		LRK54_RS09250	0.64	-2.6
2,027,497	+		LRK54_RS09250	0.64	-2.8
2,027,497	+		LRK54_RS09250	0.64	-3.3
2,027,497	+		LRK54_RS09250	0.64	-0.6
2,027,497	+		LRK54_RS09250	0.64	-2.1
2,027,497	+		LRK54_RS09250	0.64	+1.0
2,027,497	+		LRK54_RS09250	0.64	-1.5
2,027,497	+		LRK54_RS09250	0.64	+0.2
2,027,497	+		LRK54_RS09250	0.64	+3.6
2,027,497	+		LRK54_RS09250	0.64	-1.2
2,027,497	+		LRK54_RS09250	0.64	-1.6
2,027,497	+		LRK54_RS09250	0.64	-1.7
2,027,497	+		LRK54_RS09250	0.64	-1.1
2,027,497	+		LRK54_RS09250	0.64	-2.0
2,027,497	+		LRK54_RS09250	0.64	-2.4
2,027,497	+		LRK54_RS09250	0.64	-1.9
2,027,497	+		LRK54_RS09250	0.64	-2.0
2,027,497	+		LRK54_RS09250	0.64	-1.4
2,027,497	+		LRK54_RS09250	0.64	-0.6
2,027,497	+		LRK54_RS09250	0.64	-2.5
2,027,497	+		LRK54_RS09250	0.64	-1.6
2,027,497	+		LRK54_RS09250	0.64	-1.6
2,027,498	-		LRK54_RS09250	0.65	-0.7
2,027,498	-		LRK54_RS09250	0.65	-3.1
2,027,498	-		LRK54_RS09250	0.65	-0.6
2,027,498	-		LRK54_RS09250	0.65	+0.5
2,027,498	-		LRK54_RS09250	0.65	+0.2
2,027,498	-		LRK54_RS09250	0.65	-1.9
2,027,498	-		LRK54_RS09250	0.65	-1.0
2,027,498	-		LRK54_RS09250	0.65	-1.9
2,027,498	-		LRK54_RS09250	0.65	+0.1
2,027,498	-		LRK54_RS09250	0.65	-2.9
2,027,498	-		LRK54_RS09250	0.65	-1.3
2,027,498	-		LRK54_RS09250	0.65	+0.0
2,027,498	-		LRK54_RS09250	0.65	-2.4
2,027,498	-		LRK54_RS09250	0.65	+0.6
2,027,498	-		LRK54_RS09250	0.65	-0.5
2,027,498	-		LRK54_RS09250	0.65	-1.4
2,027,498	-		LRK54_RS09250	0.65	-2.0
2,027,498	-		LRK54_RS09250	0.65	-1.6
2,027,498	-		LRK54_RS09250	0.65	-1.2
2,027,498	-		LRK54_RS09250	0.65	-1.6
2,027,498	-		LRK54_RS09250	0.65	+0.6
2,027,498	-		LRK54_RS09250	0.65	+0.5
2,027,498	-		LRK54_RS09250	0.65	-0.4
2,027,498	-		LRK54_RS09250	0.65	-2.0
2,027,498	-		LRK54_RS09250	0.65	-0.0
2,027,498	-		LRK54_RS09250	0.65	-1.5
2,027,498	-		LRK54_RS09250	0.65	+0.0
2,027,534	+		LRK54_RS09250	0.70	-1.6
2,027,534	+		LRK54_RS09250	0.70	-1.7
2,027,534	+		LRK54_RS09250	0.70	-1.7
2,027,535	-		LRK54_RS09250	0.70	-2.6
2,027,535	-		LRK54_RS09250	0.70	-0.5
2,027,535	-		LRK54_RS09250	0.70	+0.4
2,027,535	-		LRK54_RS09250	0.70	+0.8
2,027,535	-		LRK54_RS09250	0.70	+1.0
2,027,535	-		LRK54_RS09250	0.70	-1.5
2,027,535	-		LRK54_RS09250	0.70	-1.0
2,027,549	+		LRK54_RS09250	0.72	-1.3
2,027,549	+		LRK54_RS09250	0.72	+0.2
2,027,549	+		LRK54_RS09250	0.72	-0.6
2,027,549	+		LRK54_RS09250	0.72	-0.1
2,027,549	+		LRK54_RS09250	0.72	-2.3
2,027,549	+		LRK54_RS09250	0.72	-1.1
2,027,549	+		LRK54_RS09250	0.72	-2.3
2,027,549	+		LRK54_RS09250	0.72	-1.3
2,027,549	+		LRK54_RS09250	0.72	-2.0
2,027,549	+		LRK54_RS09250	0.72	+0.3
2,027,549	+		LRK54_RS09250	0.72	-1.0
2,027,549	+		LRK54_RS09250	0.72	-2.6
2,027,549	+		LRK54_RS09250	0.72	-0.8
2,027,550	-		LRK54_RS09250	0.72	-1.5
2,027,550	-		LRK54_RS09250	0.72	+0.0
2,027,550	-		LRK54_RS09250	0.72	-0.9
2,027,550	-		LRK54_RS09250	0.72	-0.6
2,027,550	-		LRK54_RS09250	0.72	-1.0
2,027,550	-		LRK54_RS09250	0.72	-2.0
2,027,550	-		LRK54_RS09250	0.72	-2.0
2,027,550	-		LRK54_RS09250	0.72	+0.3
2,027,550	-		LRK54_RS09250	0.72	-2.2
2,027,550	-		LRK54_RS09250	0.72	-1.4
2,027,550	-		LRK54_RS09250	0.72	-1.0
2,027,550	-		LRK54_RS09250	0.72	+0.2
2,027,550	-		LRK54_RS09250	0.72	-1.3
2,027,550	-		LRK54_RS09250	0.72	-0.4
2,027,551	+		LRK54_RS09250	0.72	-0.7
2,027,551	+		LRK54_RS09250	0.72	-2.6
2,027,551	+		LRK54_RS09250	0.72	-0.7
2,027,551	+		LRK54_RS09250	0.72	-2.1
2,027,551	+		LRK54_RS09250	0.72	-3.9
2,027,551	+		LRK54_RS09250	0.72	-0.7
2,027,551	+		LRK54_RS09250	0.72	-2.7
2,027,551	+		LRK54_RS09250	0.72	-1.9
2,027,551	+		LRK54_RS09250	0.72	-0.3
2,027,551	+		LRK54_RS09250	0.72	-3.2
2,027,551	+		LRK54_RS09250	0.72	-1.6
2,027,551	+		LRK54_RS09250	0.72	+0.6
2,027,551	+		LRK54_RS09250	0.72	-2.5
2,027,551	+		LRK54_RS09250	0.72	-3.5
2,027,551	+		LRK54_RS09250	0.72	-1.6
2,027,551	+		LRK54_RS09250	0.72	-2.2
2,027,551	+		LRK54_RS09250	0.72	-1.3
2,027,551	+		LRK54_RS09250	0.72	-1.5
2,027,551	+		LRK54_RS09250	0.72	+0.0
2,027,551	+		LRK54_RS09250	0.72	+0.4
2,027,551	+		LRK54_RS09250	0.72	-2.7
2,027,551	+		LRK54_RS09250	0.72	-0.2
2,027,551	+		LRK54_RS09250	0.72	-2.6
2,027,551	+		LRK54_RS09250	0.72	-0.8
2,027,551	+		LRK54_RS09250	0.72	-1.9
2,027,551	+		LRK54_RS09250	0.72	-2.6
2,027,551	+		LRK54_RS09250	0.72	-0.7
2,027,551	+		LRK54_RS09250	0.72	-0.4
2,027,551	+		LRK54_RS09250	0.72	-1.5
2,027,551	+		LRK54_RS09250	0.72	-1.0
2,027,551	+		LRK54_RS09250	0.72	+0.1
2,027,551	+		LRK54_RS09250	0.72	-1.1
2,027,551	+		LRK54_RS09250	0.72	-3.1
2,027,551	+		LRK54_RS09250	0.72	-1.5
2,027,551	+		LRK54_RS09250	0.72	-0.5
2,027,551	+		LRK54_RS09250	0.72	-0.8
2,027,551	+		LRK54_RS09250	0.72	-2.6
2,027,551	+		LRK54_RS09250	0.72	-2.4
2,027,551	+		LRK54_RS09250	0.72	-0.7
2,027,551	+		LRK54_RS09250	0.72	+0.5
2,027,551	+		LRK54_RS09250	0.72	+0.3
2,027,552	-		LRK54_RS09250	0.73	-2.7
2,027,552	-		LRK54_RS09250	0.73	-1.4
2,027,552	-		LRK54_RS09250	0.73	-2.2
2,027,552	-		LRK54_RS09250	0.73	-1.4
2,027,552	-		LRK54_RS09250	0.73	-3.2
2,027,552	-		LRK54_RS09250	0.73	-0.4
2,027,552	-		LRK54_RS09250	0.73	+1.8
2,027,552	-		LRK54_RS09250	0.73	-1.2
2,027,552	-		LRK54_RS09250	0.73	-1.7
2,027,552	-		LRK54_RS09250	0.73	+0.8
2,027,552	-		LRK54_RS09250	0.73	-1.3
2,027,552	-		LRK54_RS09250	0.73	-0.6
2,027,552	-		LRK54_RS09250	0.73	-4.2
2,027,552	-		LRK54_RS09250	0.73	-1.6
2,027,552	-		LRK54_RS09250	0.73	+1.6
2,027,552	-		LRK54_RS09250	0.73	-0.0
2,027,552	-		LRK54_RS09250	0.73	-1.8
2,027,552	-		LRK54_RS09250	0.73	-1.7
2,027,552	-		LRK54_RS09250	0.73	-1.5
2,027,552	-		LRK54_RS09250	0.73	-3.1
2,027,552	-		LRK54_RS09250	0.73	-2.1
2,027,552	-		LRK54_RS09250	0.73	-1.9
2,027,552	-		LRK54_RS09250	0.73	-1.4
2,027,552	-		LRK54_RS09250	0.73	-1.8
2,027,552	-		LRK54_RS09250	0.73	+0.2
2,027,552	-		LRK54_RS09250	0.73	-1.0
2,027,552	-		LRK54_RS09250	0.73	-0.1
2,027,552	-		LRK54_RS09250	0.73	-0.5
2,027,552	-		LRK54_RS09250	0.73	-0.6
2,027,552	-		LRK54_RS09250	0.73	-2.3
2,027,552	-		LRK54_RS09250	0.73	-3.2
2,027,552	-		LRK54_RS09250	0.73	+0.8
2,027,623	+		LRK54_RS09250	0.83	-1.0
2,027,623	+		LRK54_RS09250	0.83	-1.3
2,027,623	+		LRK54_RS09250	0.83	-0.1
2,027,623	+		LRK54_RS09250	0.83	-2.3
2,027,623	+		LRK54_RS09250	0.83	-0.5
2,027,623	+		LRK54_RS09250	0.83	-2.1
2,027,623	+		LRK54_RS09250	0.83	+0.7
2,027,623	+		LRK54_RS09250	0.83	-1.0
2,027,623	+		LRK54_RS09250	0.83	-1.9
2,027,624	-		LRK54_RS09250	0.83	+1.9
2,027,624	-		LRK54_RS09250	0.83	-1.3
2,027,624	-		LRK54_RS09250	0.83	-0.9
2,027,624	-		LRK54_RS09250	0.83	-0.6
2,027,624	-		LRK54_RS09250	0.83	-1.1
2,027,624	-		LRK54_RS09250	0.83	-0.9
2,027,624	-		LRK54_RS09250	0.83	-0.9
2,027,624	-		LRK54_RS09250	0.83	-2.6
2,027,638	+		LRK54_RS09250	0.85	-1.2
2,027,638	+		LRK54_RS09250	0.85	-0.6
2,027,638	+		LRK54_RS09250	0.85	-1.2
2,027,639	-		LRK54_RS09250	0.85	-1.0
2,027,639	-		LRK54_RS09250	0.85	+1.3
2,027,639	-		LRK54_RS09250	0.85	+0.2
2,027,647	+		LRK54_RS09250	0.86	-1.6
2,027,647	+		LRK54_RS09250	0.86	-2.0
2,027,647	+		LRK54_RS09250	0.86	-0.5
2,027,647	+		LRK54_RS09250	0.86	-1.2
2,027,647	+		LRK54_RS09250	0.86	-0.8
2,027,647	+		LRK54_RS09250	0.86	-0.5
2,027,647	+		LRK54_RS09250	0.86	-2.5
2,027,647	+		LRK54_RS09250	0.86	+0.2
2,027,647	+		LRK54_RS09250	0.86	-0.9
2,027,647	+		LRK54_RS09250	0.86	+0.2
2,027,647	+		LRK54_RS09250	0.86	-2.1
2,027,647	+		LRK54_RS09250	0.86	-0.3
2,027,647	+		LRK54_RS09250	0.86	-1.8
2,027,647	+		LRK54_RS09250	0.86	+1.3
2,027,647	+		LRK54_RS09250	0.86	-0.8
2,027,648	-		LRK54_RS09250	0.87	-2.4
2,027,648	-		LRK54_RS09250	0.87	-1.0
2,027,648	-		LRK54_RS09250	0.87	+0.5
2,027,648	-		LRK54_RS09250	0.87	-0.9
2,027,648	-		LRK54_RS09250	0.87	+1.6
2,027,648	-		LRK54_RS09250	0.87	-0.5
2,027,648	-		LRK54_RS09250	0.87	-2.6
2,027,648	-		LRK54_RS09250	0.87	-1.5
2,027,648	-		LRK54_RS09250	0.87	-0.9
2,027,651	+		LRK54_RS09250	0.87	-1.3
2,027,651	+		LRK54_RS09250	0.87	-2.0
2,027,651	+		LRK54_RS09250	0.87	-3.6
2,027,651	+		LRK54_RS09250	0.87	-0.2
2,027,651	+		LRK54_RS09250	0.87	-0.8
2,027,651	+		LRK54_RS09250	0.87	-0.6
2,027,651	+		LRK54_RS09250	0.87	-0.9
2,027,651	+		LRK54_RS09250	0.87	-1.3
2,027,651	+		LRK54_RS09250	0.87	-0.3
2,027,651	+		LRK54_RS09250	0.87	-1.0
2,027,651	+		LRK54_RS09250	0.87	-0.0
2,027,651	+		LRK54_RS09250	0.87	-1.1
2,027,651	+		LRK54_RS09250	0.87	-2.8
2,027,651	+		LRK54_RS09250	0.87	-0.7
2,027,651	+		LRK54_RS09250	0.87	-1.1
2,027,651	+		LRK54_RS09250	0.87	-1.4
2,027,651	+		LRK54_RS09250	0.87	-0.6
2,027,651	+		LRK54_RS09250	0.87	-0.8
2,027,651	+		LRK54_RS09250	0.87	-2.7
2,027,651	+		LRK54_RS09250	0.87	-0.1
2,027,651	+		LRK54_RS09250	0.87	-0.5
2,027,651	+		LRK54_RS09250	0.87	-0.9
2,027,651	+		LRK54_RS09250	0.87	-3.2
2,027,651	+		LRK54_RS09250	0.87	+1.0
2,027,651	+		LRK54_RS09250	0.87	-2.4
2,027,651	+		LRK54_RS09250	0.87	-1.0
2,027,651	+		LRK54_RS09250	0.87	-2.2
2,027,651	+		LRK54_RS09250	0.87	-0.1
2,027,651	+		LRK54_RS09250	0.87	-2.7
2,027,651	+		LRK54_RS09250	0.87	-2.7
2,027,651	+		LRK54_RS09250	0.87	-2.0
2,027,651	+		LRK54_RS09250	0.87	-0.6
2,027,651	+		LRK54_RS09250	0.87	-2.7
2,027,651	+		LRK54_RS09250	0.87	-3.1
2,027,651	+		LRK54_RS09250	0.87	-0.8
2,027,651	+		LRK54_RS09250	0.87	+0.3
2,027,651	+		LRK54_RS09250	0.87	-1.9
2,027,651	+		LRK54_RS09250	0.87	-1.2
2,027,651	+		LRK54_RS09250	0.87	-2.6
2,027,651	+		LRK54_RS09250	0.87	-1.8
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