Strain Fitness in Rahnella sp. WP5 around EX31_RS12175

Experiment: L-Serine (N); RCH2 media; shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N); RCH2 media; shaking
101,507	-				+1.5
101,507	-				+0.1
101,526	+				-0.0
101,526	+				+0.7
101,526	+				-0.2
101,526	+				+1.7
101,526	+				-0.8
101,526	+				+0.2
101,526	+				+0.8
101,526	+				+0.6
101,526	+				+1.3
101,526	+				+0.4
101,526	+				-0.4
101,526	+				-0.1
101,526	+				+0.8
101,526	+				-0.1
101,526	+				+1.5
101,526	+				+0.1
101,526	+				+1.3
101,526	+				+0.7
101,527	-				-0.4
101,527	-				+0.9
101,527	-				-0.1
101,527	-				-0.6
101,527	-				-0.3
101,527	-				+1.3
101,527	-				+0.6
101,527	-				-0.4
101,527	-				-0.4
101,527	-				-0.6
101,527	-				-0.5
101,527	-				-0.5
101,527	-				-0.5
101,527	-				-0.2
101,527	-				-0.5
101,527	-				+0.2
101,527	-				-1.0
101,527	-				-0.8
101,527	-				-0.1
101,528	+				-0.1
101,528	+				+0.4
101,528	+				-0.4
101,528	+				-0.7
101,529	-				+0.7
101,529	-				-0.2
101,529	-				+0.8
101,529	-				+0.7
101,529	-				+0.6
101,529	-				+0.2
101,529	-				-0.6
101,529	-				+1.8
101,529	-				-0.9
101,529	-				-1.1
101,543	-				-0.5
101,543	-				-0.4
101,561	+				-0.2
101,561	+				-0.4
101,561	+				-0.1
101,562	-				+0.2
101,562	-				+0.1
101,562	-				+1.9
101,562	-				+0.4
101,562	-				-0.9
101,562	-				+0.2
101,634	+				-0.3
101,634	+				+0.7
101,634	+				-1.9
101,634	+				+1.3
101,634	+				+0.9
101,635	-				+0.3
101,635	-				-0.1
101,635	-				-0.2
101,635	-				-0.0
101,636	+				+0.2
101,636	+				-0.5
101,636	+				+0.4
101,637	-				-0.1
101,637	-				+0.0
101,637	-				-0.8
101,637	-				+0.8
101,637	-				+0.4
101,637	-				+1.3
101,637	-				-0.3
101,637	-				+0.1
101,654	-				+1.6
101,666	+				-0.3
101,667	-				+0.6
101,678	-				+0.3
101,690	+				-0.5
101,691	-				-0.6
101,691	-				+0.6
101,691	-				+4.7
101,698	-				-0.3
101,698	-				+1.6
101,701	+				-1.8
101,701	+				-0.1
101,701	+				+1.0
101,701	+				-1.2
101,720	+				+0.1
101,750	+				-1.8
101,751	-				-1.3
101,751	-				+0.7
101,751	-				+0.7
101,751	-				-0.7
101,783	+				+1.5
101,783	+				+0.9
101,784	-				+0.3
101,784	-				-1.1
101,834	-				+0.1
101,850	+				+0.1
101,851	-				+0.8
101,851	-				-0.6
101,851	-				-0.6
101,857	+				+0.5
101,872	+		EX31_RS12170	0.11	-0.1
101,872	+		EX31_RS12170	0.11	-1.5
101,873	-		EX31_RS12170	0.11	+0.7
101,873	-		EX31_RS12170	0.11	-0.1
101,902	+		EX31_RS12170	0.18	+0.1
101,902	+		EX31_RS12170	0.18	+0.6
101,902	+		EX31_RS12170	0.18	+0.2
101,902	+		EX31_RS12170	0.18	-0.1
101,902	+		EX31_RS12170	0.18	+1.4
101,902	+		EX31_RS12170	0.18	-0.5
101,902	+		EX31_RS12170	0.18	+0.0
101,902	+		EX31_RS12170	0.18	+1.5
101,902	+		EX31_RS12170	0.18	+0.6
101,903	-		EX31_RS12170	0.18	+0.7
101,903	-		EX31_RS12170	0.18	+0.7
101,903	-		EX31_RS12170	0.18	+0.4
101,903	-		EX31_RS12170	0.18	-0.5
101,903	-		EX31_RS12170	0.18	+0.5
101,903	-		EX31_RS12170	0.18	-0.9
101,903	-		EX31_RS12170	0.18	-0.3
101,903	-		EX31_RS12170	0.18	+0.3
101,905	+		EX31_RS12170	0.18	+1.3
101,905	+		EX31_RS12170	0.18	-0.3
101,906	-		EX31_RS12170	0.19	-1.1
101,906	-		EX31_RS12170	0.19	-0.3
101,912	+		EX31_RS12170	0.20	+0.7
102,044	+		EX31_RS12170	0.51	+0.3
102,045	-		EX31_RS12170	0.51	+0.7
102,098	+		EX31_RS12170	0.63	+0.9
102,099	-		EX31_RS12170	0.64	+0.1
102,099	-		EX31_RS12170	0.64	-0.1
102,149	+		EX31_RS12170	0.75	-0.1
102,149	+		EX31_RS12170	0.75	+0.5
102,150	-		EX31_RS12170	0.76	-0.2
102,178	+		EX31_RS12170	0.82	+0.1
102,178	+		EX31_RS12170	0.82	+0.1
102,178	+		EX31_RS12170	0.82	+0.0
102,178	+		EX31_RS12170	0.82	-0.8
102,178	+		EX31_RS12170	0.82	+0.5
102,178	+		EX31_RS12170	0.82	-0.4
102,179	-		EX31_RS12170	0.82	+0.3
102,179	-		EX31_RS12170	0.82	-0.5
102,179	-		EX31_RS12170	0.82	+1.3
102,179	-		EX31_RS12170	0.82	+0.2
102,189	+		EX31_RS12170	0.85	+0.0
102,189	+		EX31_RS12170	0.85	-0.5
102,241	+				+1.1
102,242	-				-0.1
102,242	-				-0.9
102,242	-				+0.0
102,278	+				-0.3
102,279	-				+0.6
102,279	-				+0.6
102,279	-				-1.1
102,279	-				+0.2
102,279	-				-0.8
102,279	-				-1.0
102,279	-				-0.6
102,290	-				+0.2
102,290	-				-0.8
102,294	+				+0.5
102,295	-				-0.3
102,295	-				+0.4
102,302	-				+0.6
102,302	-				+0.6
102,302	-				-0.4
102,321	+				-0.6
102,321	+				+0.5
102,322	-				-1.4
102,322	-				+0.3
102,350	+				-1.1
102,435	-				-2.0
102,435	-				-0.9
102,453	+				+0.7
102,453	+				+0.9
102,454	-				-0.7
102,454	-				-0.2
102,454	-				-0.4
102,545	-		EX31_RS12175	0.30	+0.5
102,547	-		EX31_RS12175	0.31	-0.7
102,547	-		EX31_RS12175	0.31	+0.5
102,547	-		EX31_RS12175	0.31	+0.7
102,547	-		EX31_RS12175	0.31	-0.5
102,547	-		EX31_RS12175	0.31	-1.8
102,547	-		EX31_RS12175	0.31	-0.7
102,591	-		EX31_RS12175	0.46	-0.8
102,591	-		EX31_RS12175	0.46	-1.5
102,601	-		EX31_RS12175	0.49	-2.3
102,704	-		EX31_RS12175	0.84	+0.3
102,723	-				-0.1
102,723	-				+1.5
102,723	-				-0.3
102,752	-				+0.6
102,752	-				-0.6
102,752	-				-1.0
102,752	-				-0.2
102,752	-				+0.7
102,752	-				+0.1
102,752	-				+2.9
102,752	-				-0.8
102,752	-				+0.3
102,752	-				+0.3
102,752	-				-2.7
102,793	-				-0.8
102,793	-				-0.0
102,793	-				-0.3
102,793	-				+1.5
102,793	-				-0.1
102,883	-		EX31_RS12180	0.11	+0.1
102,883	-		EX31_RS12180	0.11	+1.5
102,883	-		EX31_RS12180	0.11	+0.9
102,899	-		EX31_RS12180	0.13	-1.3
102,899	-		EX31_RS12180	0.13	+0.4
102,963	-		EX31_RS12180	0.20	+1.1
102,963	-		EX31_RS12180	0.20	-0.4
102,963	-		EX31_RS12180	0.20	-0.5
102,963	-		EX31_RS12180	0.20	-1.7
102,963	-		EX31_RS12180	0.20	-1.3
102,963	-		EX31_RS12180	0.20	-1.2
102,963	-		EX31_RS12180	0.20	-0.4
102,986	-		EX31_RS12180	0.22	-0.1
102,999	-		EX31_RS12180	0.23	-0.4
102,999	-		EX31_RS12180	0.23	+0.6
102,999	-		EX31_RS12180	0.23	-0.8
102,999	-		EX31_RS12180	0.23	-1.3
103,021	-		EX31_RS12180	0.26	+0.2
103,021	-		EX31_RS12180	0.26	-0.7
103,021	-		EX31_RS12180	0.26	+0.0
103,021	-		EX31_RS12180	0.26	+0.7
103,071	-		EX31_RS12180	0.31	-1.8
103,071	-		EX31_RS12180	0.31	-1.2
103,071	-		EX31_RS12180	0.31	-0.9
103,071	-		EX31_RS12180	0.31	-0.9
103,096	-		EX31_RS12180	0.33	-0.3
103,096	-		EX31_RS12180	0.33	-0.8
103,131	-		EX31_RS12180	0.37	-1.1
103,131	-		EX31_RS12180	0.37	-0.3
103,131	-		EX31_RS12180	0.37	+1.0
103,131	-		EX31_RS12180	0.37	-2.6
103,131	-		EX31_RS12180	0.37	-0.2
103,131	-		EX31_RS12180	0.37	+0.8
103,131	-		EX31_RS12180	0.37	+0.3
103,131	-		EX31_RS12180	0.37	-1.6
103,131	-		EX31_RS12180	0.37	-0.5
103,172	-		EX31_RS12180	0.41	+0.1
103,172	-		EX31_RS12180	0.41	-0.4
103,172	-		EX31_RS12180	0.41	-0.1
103,172	-		EX31_RS12180	0.41	-0.6
103,172	-		EX31_RS12180	0.41	+0.0
103,192	-		EX31_RS12180	0.43	+0.4
103,192	-		EX31_RS12180	0.43	-0.4
103,238	-		EX31_RS12180	0.48	+0.2
103,292	-		EX31_RS12180	0.54	-0.1
103,292	-		EX31_RS12180	0.54	+2.1
103,292	-		EX31_RS12180	0.54	-0.4
103,292	-		EX31_RS12180	0.54	+0.0
103,292	-		EX31_RS12180	0.54	-1.3
103,344	-		EX31_RS12180	0.59	+0.5
103,344	-		EX31_RS12180	0.59	-0.5
103,344	-		EX31_RS12180	0.59	+1.7
103,352	-		EX31_RS12180	0.60	+0.3
103,352	-		EX31_RS12180	0.60	-0.4
103,352	-		EX31_RS12180	0.60	+1.3
103,559	-		EX31_RS12180	0.81	-0.4
103,559	-		EX31_RS12180	0.81	+0.4
103,559	-		EX31_RS12180	0.81	-0.9
103,563	-		EX31_RS12180	0.82	+0.0
103,563	-		EX31_RS12180	0.82	+0.3
103,563	-		EX31_RS12180	0.82	+0.9
103,563	-		EX31_RS12180	0.82	-1.0
103,563	-		EX31_RS12180	0.82	-0.4
103,563	-		EX31_RS12180	0.82	-0.1
103,563	-		EX31_RS12180	0.82	+0.1
103,563	-		EX31_RS12180	0.82	+0.1
103,563	-		EX31_RS12180	0.82	-0.8
103,563	-		EX31_RS12180	0.82	-1.1
103,563	-		EX31_RS12180	0.82	-0.7
103,563	-		EX31_RS12180	0.82	-1.0
103,563	-		EX31_RS12180	0.82	-0.8
103,563	-		EX31_RS12180	0.82	+0.1
103,563	-		EX31_RS12180	0.82	-0.1
103,563	-		EX31_RS12180	0.82	-0.5
103,563	-		EX31_RS12180	0.82	-0.2
103,563	-		EX31_RS12180	0.82	+1.1
103,563	-		EX31_RS12180	0.82	+0.4
103,563	-		EX31_RS12180	0.82	+0.4
103,563	-		EX31_RS12180	0.82	-0.2
103,583	-		EX31_RS12180	0.84	-0.1
103,583	-		EX31_RS12180	0.84	+0.3
103,626	-		EX31_RS12180	0.88	-0.4
103,656	-				+0.1
103,656	-				-0.5
103,656	-				-1.1
103,656	-				-0.0
103,656	-				-1.6
103,656	-				-0.2
103,656	-				-1.0
103,714	+				+1.9
103,744	-				-0.6
103,744	-				-0.3
103,744	-				-0.2