Experiment: L-Serine (N); RCH2 media; shaking
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS01630 and EX31_RS01635 overlap by 4 nucleotides EX31_RS01635 and EX31_RS01640 overlap by 4 nucleotides
EX31_RS01630: EX31_RS01630 - phage portal protein, at 361,800 to 363,278
_RS01630
EX31_RS01635: EX31_RS01635 - hypothetical protein, at 363,275 to 363,493
_RS01635
EX31_RS01640: EX31_RS01640 - phage terminase large subunit family protein, at 363,490 to 365,592
_RS01640
Position (kb) 363
364 Strain fitness (log2 ratio) -2
-1
0
1
2 at 362.330 kb on + strand, within EX31_RS01630 at 362.331 kb on - strand, within EX31_RS01630 at 362.415 kb on - strand, within EX31_RS01630 at 362.458 kb on + strand, within EX31_RS01630 at 362.458 kb on + strand, within EX31_RS01630 at 362.458 kb on + strand, within EX31_RS01630 at 362.458 kb on + strand, within EX31_RS01630 at 362.459 kb on - strand, within EX31_RS01630 at 362.459 kb on - strand, within EX31_RS01630 at 362.459 kb on - strand, within EX31_RS01630 at 362.459 kb on - strand, within EX31_RS01630 at 362.459 kb on - strand, within EX31_RS01630 at 362.628 kb on - strand, within EX31_RS01630 at 362.675 kb on - strand, within EX31_RS01630 at 362.675 kb on - strand, within EX31_RS01630 at 362.675 kb on - strand, within EX31_RS01630 at 362.675 kb on - strand, within EX31_RS01630 at 362.675 kb on - strand, within EX31_RS01630 at 362.675 kb on - strand, within EX31_RS01630 at 362.704 kb on + strand, within EX31_RS01630 at 362.704 kb on + strand, within EX31_RS01630 at 362.704 kb on + strand, within EX31_RS01630 at 362.704 kb on + strand, within EX31_RS01630 at 362.705 kb on - strand, within EX31_RS01630 at 362.705 kb on - strand, within EX31_RS01630 at 362.756 kb on - strand, within EX31_RS01630 at 362.957 kb on + strand, within EX31_RS01630 at 363.194 kb on - strand at 363.454 kb on + strand, within EX31_RS01635 at 363.454 kb on + strand, within EX31_RS01635 at 363.454 kb on + strand, within EX31_RS01635 at 363.454 kb on + strand, within EX31_RS01635 at 363.455 kb on - strand, within EX31_RS01635 at 363.455 kb on - strand, within EX31_RS01635 at 363.455 kb on - strand, within EX31_RS01635 at 363.455 kb on - strand, within EX31_RS01635 at 363.455 kb on - strand, within EX31_RS01635 at 363.455 kb on - strand, within EX31_RS01635 at 363.455 kb on - strand, within EX31_RS01635 at 363.455 kb on - strand, within EX31_RS01635 at 363.455 kb on - strand, within EX31_RS01635 at 363.455 kb on - strand, within EX31_RS01635 at 363.456 kb on + strand, within EX31_RS01635 at 363.456 kb on + strand, within EX31_RS01635 at 363.456 kb on + strand, within EX31_RS01635 at 363.456 kb on + strand, within EX31_RS01635 at 363.457 kb on - strand, within EX31_RS01635 at 363.457 kb on - strand, within EX31_RS01635 at 363.457 kb on - strand, within EX31_RS01635 at 363.569 kb on - strand at 363.569 kb on - strand at 363.576 kb on + strand at 363.577 kb on - strand at 363.677 kb on + strand at 363.707 kb on + strand, within EX31_RS01640 at 363.707 kb on + strand, within EX31_RS01640 at 363.709 kb on + strand, within EX31_RS01640 at 363.709 kb on + strand, within EX31_RS01640 at 363.782 kb on + strand, within EX31_RS01640 at 363.782 kb on + strand, within EX31_RS01640 at 363.783 kb on - strand, within EX31_RS01640 at 363.783 kb on - strand, within EX31_RS01640 at 363.833 kb on + strand, within EX31_RS01640 at 363.834 kb on - strand, within EX31_RS01640 at 363.834 kb on - strand, within EX31_RS01640 at 363.834 kb on - strand, within EX31_RS01640 at 363.834 kb on - strand, within EX31_RS01640 at 363.834 kb on - strand, within EX31_RS01640 at 363.888 kb on + strand, within EX31_RS01640 at 364.016 kb on + strand, within EX31_RS01640 at 364.017 kb on - strand, within EX31_RS01640 at 364.064 kb on + strand, within EX31_RS01640 at 364.064 kb on + strand, within EX31_RS01640 at 364.065 kb on - strand, within EX31_RS01640 at 364.393 kb on - strand, within EX31_RS01640 at 364.422 kb on + strand, within EX31_RS01640 at 364.464 kb on + strand, within EX31_RS01640 at 364.465 kb on - strand, within EX31_RS01640 at 364.465 kb on - strand, within EX31_RS01640 at 364.467 kb on - strand, within EX31_RS01640 at 364.467 kb on - strand, within EX31_RS01640 at 364.467 kb on - strand, within EX31_RS01640 at 364.467 kb on - strand, within EX31_RS01640 at 364.467 kb on - strand, within EX31_RS01640 at 364.467 kb on - strand, within EX31_RS01640
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N); RCH2 media; shaking remove 362,330 + EX31_RS01630 0.36 +0.5 362,331 - EX31_RS01630 0.36 -0.8 362,415 - EX31_RS01630 0.42 -0.4 362,458 + EX31_RS01630 0.44 +1.9 362,458 + EX31_RS01630 0.44 +0.1 362,458 + EX31_RS01630 0.44 -0.5 362,458 + EX31_RS01630 0.44 -1.4 362,459 - EX31_RS01630 0.45 +0.6 362,459 - EX31_RS01630 0.45 -0.6 362,459 - EX31_RS01630 0.45 -0.8 362,459 - EX31_RS01630 0.45 +0.2 362,459 - EX31_RS01630 0.45 +1.2 362,628 - EX31_RS01630 0.56 -2.4 362,675 - EX31_RS01630 0.59 -0.4 362,675 - EX31_RS01630 0.59 +0.6 362,675 - EX31_RS01630 0.59 +1.4 362,675 - EX31_RS01630 0.59 +0.8 362,675 - EX31_RS01630 0.59 +0.0 362,675 - EX31_RS01630 0.59 -0.9 362,704 + EX31_RS01630 0.61 +0.4 362,704 + EX31_RS01630 0.61 -0.1 362,704 + EX31_RS01630 0.61 -1.1 362,704 + EX31_RS01630 0.61 +0.4 362,705 - EX31_RS01630 0.61 +0.0 362,705 - EX31_RS01630 0.61 +1.0 362,756 - EX31_RS01630 0.65 -0.6 362,957 + EX31_RS01630 0.78 -0.3 363,194 - -0.7 363,454 + EX31_RS01635 0.82 +0.6 363,454 + EX31_RS01635 0.82 +2.4 363,454 + EX31_RS01635 0.82 -2.1 363,454 + EX31_RS01635 0.82 -0.1 363,455 - EX31_RS01635 0.82 +0.3 363,455 - EX31_RS01635 0.82 +0.9 363,455 - EX31_RS01635 0.82 +1.2 363,455 - EX31_RS01635 0.82 +1.6 363,455 - EX31_RS01635 0.82 +0.9 363,455 - EX31_RS01635 0.82 +0.7 363,455 - EX31_RS01635 0.82 +0.9 363,455 - EX31_RS01635 0.82 +0.6 363,455 - EX31_RS01635 0.82 -1.4 363,455 - EX31_RS01635 0.82 -1.3 363,456 + EX31_RS01635 0.83 +0.6 363,456 + EX31_RS01635 0.83 +0.1 363,456 + EX31_RS01635 0.83 +1.3 363,456 + EX31_RS01635 0.83 +0.5 363,457 - EX31_RS01635 0.83 +0.8 363,457 - EX31_RS01635 0.83 +1.9 363,457 - EX31_RS01635 0.83 +1.1 363,569 - +0.1 363,569 - -1.2 363,576 + +1.7 363,577 - -1.1 363,677 + -0.3 363,707 + EX31_RS01640 0.10 +0.2 363,707 + EX31_RS01640 0.10 +0.8 363,709 + EX31_RS01640 0.10 +1.9 363,709 + EX31_RS01640 0.10 -1.0 363,782 + EX31_RS01640 0.14 +0.6 363,782 + EX31_RS01640 0.14 -0.6 363,783 - EX31_RS01640 0.14 +0.7 363,783 - EX31_RS01640 0.14 -0.2 363,833 + EX31_RS01640 0.16 +0.4 363,834 - EX31_RS01640 0.16 +2.4 363,834 - EX31_RS01640 0.16 -0.8 363,834 - EX31_RS01640 0.16 +1.2 363,834 - EX31_RS01640 0.16 +1.5 363,834 - EX31_RS01640 0.16 -0.5 363,888 + EX31_RS01640 0.19 +0.1 364,016 + EX31_RS01640 0.25 -0.4 364,017 - EX31_RS01640 0.25 +1.9 364,064 + EX31_RS01640 0.27 +1.2 364,064 + EX31_RS01640 0.27 -0.2 364,065 - EX31_RS01640 0.27 +1.9 364,393 - EX31_RS01640 0.43 -0.5 364,422 + EX31_RS01640 0.44 -2.4 364,464 + EX31_RS01640 0.46 +1.9 364,465 - EX31_RS01640 0.46 +0.2 364,465 - EX31_RS01640 0.46 +1.3 364,467 - EX31_RS01640 0.46 +1.2 364,467 - EX31_RS01640 0.46 -1.3 364,467 - EX31_RS01640 0.46 -0.4 364,467 - EX31_RS01640 0.46 -0.4 364,467 - EX31_RS01640 0.46 +0.7 364,467 - EX31_RS01640 0.46 -0.7
Or see this region's nucleotide sequence