Experiment: L-Serine (N); RCH2 media; shaking
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS24420 and EX31_RS24425 are separated by 6 nucleotides EX31_RS24425 and EX31_RS24430 are separated by 18 nucleotides EX31_RS24430 and EX31_RS24435 are separated by 13 nucleotides EX31_RS24435 and EX31_RS24440 are separated by 153 nucleotides
EX31_RS24420: EX31_RS24420 - phosphate acyltransferase PlsX, at 652,309 to 653,343
_RS24420
EX31_RS24425: EX31_RS24425 - ketoacyl-ACP synthase III, at 653,350 to 654,303
_RS24425
EX31_RS24430: EX31_RS24430 - ACP S-malonyltransferase, at 654,322 to 655,251
_RS24430
EX31_RS24435: EX31_RS24435 - 3-oxoacyl-ACP reductase FabG, at 655,265 to 655,999
_RS24435
EX31_RS24440: EX31_RS24440 - acyl carrier protein, at 656,153 to 656,389
_RS24440
Position (kb) 654
655
656 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 653.324 kb on + strand at 653.324 kb on + strand at 653.324 kb on + strand at 653.324 kb on + strand at 653.324 kb on + strand at 653.327 kb on + strand at 655.249 kb on + strand at 655.249 kb on + strand at 655.252 kb on + strand at 655.252 kb on + strand at 655.988 kb on + strand at 655.988 kb on + strand at 655.988 kb on + strand at 655.988 kb on + strand at 655.988 kb on + strand at 655.988 kb on + strand at 655.988 kb on + strand at 655.988 kb on + strand at 655.988 kb on + strand at 656.012 kb on + strand at 656.012 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N); RCH2 media; shaking remove 653,324 + +0.1 653,324 + -0.1 653,324 + -1.2 653,324 + +1.2 653,324 + -0.5 653,327 + +0.7 655,249 + +0.1 655,249 + -0.3 655,252 + +1.8 655,252 + +0.1 655,988 + -1.1 655,988 + +0.2 655,988 + +0.9 655,988 + -1.8 655,988 + -0.8 655,988 + -3.4 655,988 + +1.6 655,988 + +0.2 655,988 + +0.2 656,012 + -1.6 656,012 + +0.2
Or see this region's nucleotide sequence