Strain Fitness in Rahnella sp. WP5 around EX31_RS17250

Experiment: L-Serine (N); RCH2 media; shaking

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine (N); RCH2 media; shaking
1,304	+				-0.0
1,304	+				+3.1
1,304	+				+0.4
1,336	+				-0.2
1,337	-				+1.0
1,435	+		EX31_RS17240	0.33	+1.0
1,435	+		EX31_RS17240	0.33	+0.6
1,579	+				-0.5
1,595	+				+0.8
1,595	+				-1.1
1,595	+				-0.0
1,618	+				-0.1
1,648	+				+1.8
1,667	+				+0.3
1,668	-				+0.2
1,798	+		EX31_RS17245	0.55	-1.0
1,798	+		EX31_RS17245	0.55	+0.7
1,828	+		EX31_RS17245	0.66	-0.3
1,829	-		EX31_RS17245	0.67	+0.5
1,835	+		EX31_RS17245	0.69	-0.6
1,835	+		EX31_RS17245	0.69	+0.1
1,840	+		EX31_RS17245	0.71	+0.0
1,841	-		EX31_RS17245	0.71	-1.8
1,866	+		EX31_RS17245	0.81	+0.8
1,880	+		EX31_RS17245	0.86	-1.6
1,881	-		EX31_RS17245	0.86	-2.2
1,928	+				+0.8
1,929	-				+0.8
1,938	+		EX31_RS26070	0.10	+0.7
1,987	+		EX31_RS26070	0.39	+1.8
1,988	-		EX31_RS26070	0.39	-0.4
2,003	+		EX31_RS26070	0.48	+1.6
2,003	+		EX31_RS26070	0.48	+1.8
2,004	-		EX31_RS26070	0.48	-0.7
2,060	+		EX31_RS26070	0.80	+1.8
2,060	+		EX31_RS26070	0.80	+1.1
2,060	+		EX31_RS26070	0.80	+0.2
2,060	+		EX31_RS26070	0.80	-0.2
2,060	+		EX31_RS26070	0.80	-0.2
2,061	-		EX31_RS26070	0.81	+1.8
2,061	-		EX31_RS26070	0.81	-0.2
2,132	+				+0.0
2,133	-				+0.0
2,195	+				-0.5
2,195	+				-0.9
2,195	+				-0.4
2,195	+				-0.2
2,196	-				+0.2
2,196	-				+0.5
2,196	-				+0.8
2,196	-				+0.3
2,207	+				+1.5
2,207	+				+0.6
2,211	+				-1.2
2,211	+				-1.6
2,212	-				+1.8
2,212	-				+0.1
2,212	-				+0.2
2,218	+				+0.2
2,230	+				+0.1
2,231	-				-0.2
2,366	+		EX31_RS17250	0.31	-0.2
2,372	-		EX31_RS17250	0.32	-1.8
2,382	-		EX31_RS17250	0.35	-1.4
2,395	+		EX31_RS17250	0.39	+0.6
2,398	-		EX31_RS17250	0.40	-0.8
2,439	+		EX31_RS17250	0.53	-0.4
2,481	+		EX31_RS17250	0.65	-0.1
2,481	+		EX31_RS17250	0.65	-1.2
2,481	+		EX31_RS17250	0.65	+0.5
2,482	-		EX31_RS17250	0.65	-0.5
2,482	-		EX31_RS17250	0.65	+0.9
2,530	+		EX31_RS17250	0.80	-0.4
2,566	-				-0.6
2,566	-				+0.5
2,566	-				+2.0
2,566	-				-1.1
2,574	-				+0.3
2,574	-				+1.4
2,592	-				-0.1
2,596	+				+1.6
2,596	+				+0.2
2,597	-				-0.3
2,597	-				+0.4
2,597	-				+0.4
2,597	-				-1.2
2,597	-				-0.5
2,597	-				+0.8
2,597	-				+0.7
2,597	-				+0.9
2,607	+				-0.8
2,608	-				+1.0
2,608	-				-0.6
2,608	-				+0.4
2,608	-				+0.4
2,618	-				+1.8
2,628	-				+0.9
2,628	-				+0.3
2,628	-				+1.6
2,631	+				+1.2
2,632	-				+3.0
2,632	-				-0.4
2,632	-				+0.8
2,632	-				+1.0
2,632	-				-1.2
2,632	-				+0.4
2,632	-				+1.1
2,632	-				-0.2
2,632	-				-0.8
2,632	-				+0.6
2,632	-				+1.5
2,646	-		EX31_RS17255	0.13	-0.6
2,646	-		EX31_RS17255	0.13	-0.0
2,646	-		EX31_RS17255	0.13	+2.1
2,646	-		EX31_RS17255	0.13	+2.0
2,646	-		EX31_RS17255	0.13	-0.9
2,656	-		EX31_RS17255	0.15	+0.2
2,674	-		EX31_RS17255	0.19	+0.8
2,703	+		EX31_RS17255	0.25	+2.1
2,704	-		EX31_RS17255	0.26	+0.6
2,704	-		EX31_RS17255	0.26	-1.6
2,732	+		EX31_RS17255	0.32	-2.8
2,732	+		EX31_RS17255	0.32	-1.0
2,732	+		EX31_RS17255	0.32	+0.6
2,732	+		EX31_RS17255	0.32	-1.2
2,732	+		EX31_RS17255	0.32	+0.5
2,732	+		EX31_RS17255	0.32	-2.1
2,732	+		EX31_RS17255	0.32	-1.0
2,732	+		EX31_RS17255	0.32	+0.9
2,733	-		EX31_RS17255	0.32	-1.5
2,733	-		EX31_RS17255	0.32	+0.9
2,733	-		EX31_RS17255	0.32	+0.4
2,733	-		EX31_RS17255	0.32	-0.6
2,733	-		EX31_RS17255	0.32	+0.6
2,733	-		EX31_RS17255	0.32	+0.4
2,733	-		EX31_RS17255	0.32	+1.8
2,733	-		EX31_RS17255	0.32	+0.2
2,733	-		EX31_RS17255	0.32	+0.5
2,733	-		EX31_RS17255	0.32	-1.4
2,733	-		EX31_RS17255	0.32	+1.2
2,800	+		EX31_RS17255	0.47	+0.4
2,997	-				-0.9
3,002	+				-1.0
3,002	+				+1.1
3,002	+				+0.2
3,002	+				-0.3
3,002	+				+0.8
3,002	+				+0.5
3,003	-				+1.2
3,003	-				-1.5
3,003	-				-0.9
3,003	-				+0.7
3,003	-				-0.6
3,003	-				-0.1
3,003	-				-1.4
3,003	-				+0.5
3,003	-				-0.2
3,013	+				-0.4
3,014	-				-0.2
3,014	-				+3.2
3,028	-				+1.0
3,028	-				+0.4
3,045	+				+1.2
3,045	+				+0.2
3,046	-				-1.0
3,078	+				+0.9
3,079	-				+0.2
3,079	-				+2.8
3,100	-		EX31_RS17260	0.12	+0.8
3,100	-		EX31_RS17260	0.12	+0.7
3,100	-		EX31_RS17260	0.12	+0.4
3,120	+		EX31_RS17260	0.16	+0.9
3,121	-		EX31_RS17260	0.16	-0.2
3,121	-		EX31_RS17260	0.16	-1.0
3,121	-		EX31_RS17260	0.16	+0.3
3,121	-		EX31_RS17260	0.16	-0.8
3,150	-		EX31_RS17260	0.22	-0.2
3,150	-		EX31_RS17260	0.22	+0.2
3,150	-		EX31_RS17260	0.22	+0.8
3,150	-		EX31_RS17260	0.22	+1.2
3,156	-		EX31_RS17260	0.23	+1.8
3,213	-		EX31_RS17260	0.35	-0.0
3,213	-		EX31_RS17260	0.35	+0.4
3,225	+		EX31_RS17260	0.37	-0.4
3,226	-		EX31_RS17260	0.37	+1.4
3,226	-		EX31_RS17260	0.37	+0.5
3,226	-		EX31_RS17260	0.37	+1.1
3,226	-		EX31_RS17260	0.37	-1.6
3,226	-		EX31_RS17260	0.37	+1.1
3,229	-		EX31_RS17260	0.38	+0.7
3,411	+		EX31_RS17260	0.76	+0.0
3,424	+		EX31_RS17260	0.78	-1.8
3,482	-				-1.6
3,509	+				+0.3
3,510	-				-2.0
3,510	-				+0.2
3,510	-				-0.4
3,510	-				+1.0
3,510	-				-0.2
3,513	+				+2.3
3,514	-				+0.2
3,514	-				+0.5
3,514	-				-0.4
3,521	+				-0.1
3,522	-				+1.1
3,522	-				-0.2
3,523	+				-0.4
3,523	+				+0.1
3,523	+				+1.2
3,523	+				+1.8
3,561	+				+0.4
3,567	-				+0.7
3,588	-				+0.8