Experiment: L-Serine (N); RCH2 media; shaking
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS14050 and EX31_RS14055 are separated by 14 nucleotides EX31_RS14055 and EX31_RS26015 are separated by 174 nucleotides EX31_RS26015 and EX31_RS14060 are separated by 19 nucleotides EX31_RS14060 and EX31_RS14065 are separated by 42 nucleotides
EX31_RS14050: EX31_RS14050 - phenylalanine--tRNA ligase subunit beta, at 73,788 to 76,175
_RS14050
EX31_RS14055: EX31_RS14055 - phenylalanine--tRNA ligase subunit alpha, at 76,190 to 77,173
_RS14055
EX31_RS26015: EX31_RS26015 - pheST operon leader peptide PheM, at 77,348 to 77,503
_RS26015
EX31_RS14060: EX31_RS14060 - 50S ribosomal protein L20, at 77,523 to 77,879
_RS14060
EX31_RS14065: EX31_RS14065 - 50S ribosomal protein L35, at 77,922 to 78,119
_RS14065
Position (kb) 76
77
78 Strain fitness (log2 ratio) -1
0
1 at 77.215 kb on - strand at 77.225 kb on - strand at 77.225 kb on - strand at 77.261 kb on - strand at 77.261 kb on - strand at 77.261 kb on - strand at 77.262 kb on + strand at 77.263 kb on - strand at 77.263 kb on - strand at 77.301 kb on - strand at 77.301 kb on - strand at 77.301 kb on - strand at 77.488 kb on - strand at 77.490 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N); RCH2 media; shaking remove 77,215 - -0.5 77,225 - -0.1 77,225 - -0.9 77,261 - +0.7 77,261 - -1.5 77,261 - -0.8 77,262 + -0.9 77,263 - +0.4 77,263 - +1.1 77,301 - -0.1 77,301 - -0.6 77,301 - +0.7 77,488 - +0.1 77,490 - +0.4
Or see this region's nucleotide sequence