Experiment: L-Serine (N); RCH2 media; shaking
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS10090 and EX31_RS10095 are separated by 9 nucleotides EX31_RS10095 and EX31_RS10100 are separated by 215 nucleotides
EX31_RS10090: EX31_RS10090 - NAD-dependent epimerase, at 227,808 to 228,815
_RS10090
EX31_RS10095: EX31_RS10095 - UDP-glucose/GDP-mannose dehydrogenase family protein, at 228,825 to 230,168
_RS10095
EX31_RS10100: EX31_RS10100 - two-component system response regulator RssB, at 230,384 to 231,397
_RS10100
Position (kb) 228
229
230
231 Strain fitness (log2 ratio) -2
-1
0
1
2 at 228.002 kb on - strand, within EX31_RS10090 at 228.039 kb on - strand, within EX31_RS10090 at 228.039 kb on - strand, within EX31_RS10090 at 228.039 kb on - strand, within EX31_RS10090 at 228.048 kb on - strand, within EX31_RS10090 at 228.048 kb on - strand, within EX31_RS10090 at 228.271 kb on - strand, within EX31_RS10090 at 228.306 kb on - strand, within EX31_RS10090 at 228.465 kb on - strand, within EX31_RS10090 at 228.642 kb on - strand, within EX31_RS10090 at 228.707 kb on - strand, within EX31_RS10090 at 228.773 kb on - strand at 229.106 kb on - strand, within EX31_RS10095 at 230.271 kb on - strand at 230.285 kb on + strand at 230.293 kb on - strand at 230.293 kb on - strand at 230.355 kb on + strand at 230.369 kb on + strand at 230.370 kb on - strand at 230.553 kb on - strand, within EX31_RS10100 at 230.595 kb on + strand, within EX31_RS10100 at 230.596 kb on - strand, within EX31_RS10100 at 230.646 kb on - strand, within EX31_RS10100 at 230.701 kb on + strand, within EX31_RS10100 at 230.701 kb on + strand, within EX31_RS10100 at 230.701 kb on + strand, within EX31_RS10100 at 230.705 kb on + strand, within EX31_RS10100 at 230.797 kb on - strand, within EX31_RS10100
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N); RCH2 media; shaking remove 228,002 - EX31_RS10090 0.19 +0.8 228,039 - EX31_RS10090 0.23 +0.9 228,039 - EX31_RS10090 0.23 +0.8 228,039 - EX31_RS10090 0.23 +0.0 228,048 - EX31_RS10090 0.24 +0.6 228,048 - EX31_RS10090 0.24 +0.1 228,271 - EX31_RS10090 0.46 +0.0 228,306 - EX31_RS10090 0.49 +1.0 228,465 - EX31_RS10090 0.65 +0.9 228,642 - EX31_RS10090 0.83 +0.8 228,707 - EX31_RS10090 0.89 +1.6 228,773 - +1.0 229,106 - EX31_RS10095 0.21 -1.0 230,271 - +0.5 230,285 + +0.0 230,293 - -0.4 230,293 - +0.4 230,355 + +0.2 230,369 + -2.1 230,370 - +0.4 230,553 - EX31_RS10100 0.17 +1.6 230,595 + EX31_RS10100 0.21 -0.4 230,596 - EX31_RS10100 0.21 +0.6 230,646 - EX31_RS10100 0.26 +0.4 230,701 + EX31_RS10100 0.31 +0.8 230,701 + EX31_RS10100 0.31 +2.6 230,701 + EX31_RS10100 0.31 -1.6 230,705 + EX31_RS10100 0.32 +2.2 230,797 - EX31_RS10100 0.41 +1.6
Or see this region's nucleotide sequence