Experiment: L-Serine (N); RCH2 media; shaking
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS08950 and EX31_RS08955 are separated by 53 nucleotides EX31_RS08955 and EX31_RS08960 are separated by 214 nucleotides
EX31_RS08950: EX31_RS08950 - chaperonin GroEL, at 301,786 to 303,432
_RS08950
EX31_RS08955: EX31_RS08955 - co-chaperone GroES, at 303,486 to 303,779
_RS08955
EX31_RS08960: EX31_RS08960 - FxsA family protein, at 303,994 to 304,485
_RS08960
Position (kb) 303
304 Strain fitness (log2 ratio) -2
-1
0
1
2 at 303.974 kb on - strand at 303.996 kb on - strand at 304.029 kb on + strand at 304.030 kb on - strand at 304.035 kb on + strand at 304.035 kb on + strand at 304.086 kb on + strand, within EX31_RS08960 at 304.087 kb on - strand, within EX31_RS08960 at 304.087 kb on - strand, within EX31_RS08960 at 304.087 kb on - strand, within EX31_RS08960 at 304.087 kb on - strand, within EX31_RS08960 at 304.117 kb on - strand, within EX31_RS08960 at 304.267 kb on - strand, within EX31_RS08960 at 304.321 kb on - strand, within EX31_RS08960 at 304.360 kb on + strand, within EX31_RS08960 at 304.360 kb on + strand, within EX31_RS08960 at 304.361 kb on - strand, within EX31_RS08960 at 304.361 kb on - strand, within EX31_RS08960 at 304.361 kb on - strand, within EX31_RS08960 at 304.361 kb on - strand, within EX31_RS08960 at 304.361 kb on - strand, within EX31_RS08960 at 304.361 kb on - strand, within EX31_RS08960 at 304.361 kb on - strand, within EX31_RS08960 at 304.361 kb on - strand, within EX31_RS08960 at 304.361 kb on - strand, within EX31_RS08960 at 304.361 kb on - strand, within EX31_RS08960 at 304.361 kb on - strand, within EX31_RS08960 at 304.426 kb on - strand, within EX31_RS08960 at 304.426 kb on - strand, within EX31_RS08960 at 304.429 kb on + strand, within EX31_RS08960 at 304.429 kb on + strand, within EX31_RS08960 at 304.430 kb on - strand, within EX31_RS08960 at 304.445 kb on + strand at 304.446 kb on - strand at 304.465 kb on + strand at 304.465 kb on + strand at 304.465 kb on + strand at 304.465 kb on + strand at 304.466 kb on - strand at 304.466 kb on - strand at 304.469 kb on - strand at 304.500 kb on - strand at 304.500 kb on - strand at 304.500 kb on - strand at 304.500 kb on - strand at 304.500 kb on - strand at 304.500 kb on - strand at 304.500 kb on - strand at 304.546 kb on + strand at 304.547 kb on - strand at 304.547 kb on - strand at 304.547 kb on - strand at 304.547 kb on - strand at 304.547 kb on - strand at 304.547 kb on - strand at 304.593 kb on - strand at 304.593 kb on - strand at 304.593 kb on - strand at 304.593 kb on - strand at 304.642 kb on + strand at 304.642 kb on + strand at 304.643 kb on - strand at 304.654 kb on + strand at 304.654 kb on + strand at 304.654 kb on + strand at 304.681 kb on + strand at 304.681 kb on + strand at 304.682 kb on - strand at 304.685 kb on - strand at 304.685 kb on - strand at 304.699 kb on + strand at 304.699 kb on + strand at 304.700 kb on - strand at 304.713 kb on - strand at 304.713 kb on - strand at 304.713 kb on - strand at 304.721 kb on + strand at 304.721 kb on + strand at 304.721 kb on + strand at 304.721 kb on + strand at 304.721 kb on + strand at 304.721 kb on + strand at 304.722 kb on - strand at 304.722 kb on - strand at 304.722 kb on - strand at 304.722 kb on - strand at 304.722 kb on - strand at 304.722 kb on - strand at 304.722 kb on - strand at 304.722 kb on - strand at 304.722 kb on - strand at 304.722 kb on - strand at 304.722 kb on - strand at 304.722 kb on - strand at 304.722 kb on - strand at 304.724 kb on + strand at 304.724 kb on + strand at 304.725 kb on - strand at 304.725 kb on - strand at 304.725 kb on - strand at 304.725 kb on - strand at 304.725 kb on - strand at 304.725 kb on - strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.749 kb on + strand at 304.750 kb on - strand at 304.750 kb on - strand at 304.750 kb on - strand at 304.750 kb on - strand at 304.750 kb on - strand at 304.750 kb on - strand at 304.750 kb on - strand at 304.750 kb on - strand at 304.750 kb on - strand at 304.750 kb on - strand at 304.750 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N); RCH2 media; shaking remove 303,974 - +0.5 303,996 - +0.9 304,029 + +0.1 304,030 - -0.1 304,035 + +0.8 304,035 + +0.3 304,086 + EX31_RS08960 0.19 +0.4 304,087 - EX31_RS08960 0.19 +0.2 304,087 - EX31_RS08960 0.19 +0.4 304,087 - EX31_RS08960 0.19 -0.7 304,087 - EX31_RS08960 0.19 -1.3 304,117 - EX31_RS08960 0.25 -1.3 304,267 - EX31_RS08960 0.55 -0.3 304,321 - EX31_RS08960 0.66 +0.7 304,360 + EX31_RS08960 0.74 -0.5 304,360 + EX31_RS08960 0.74 +0.7 304,361 - EX31_RS08960 0.75 -0.2 304,361 - EX31_RS08960 0.75 +1.7 304,361 - EX31_RS08960 0.75 +0.8 304,361 - EX31_RS08960 0.75 +0.9 304,361 - EX31_RS08960 0.75 +0.1 304,361 - EX31_RS08960 0.75 -1.8 304,361 - EX31_RS08960 0.75 +0.6 304,361 - EX31_RS08960 0.75 +0.5 304,361 - EX31_RS08960 0.75 +0.6 304,361 - EX31_RS08960 0.75 +0.7 304,361 - EX31_RS08960 0.75 -0.4 304,426 - EX31_RS08960 0.88 -0.8 304,426 - EX31_RS08960 0.88 +0.2 304,429 + EX31_RS08960 0.88 +0.7 304,429 + EX31_RS08960 0.88 +0.2 304,430 - EX31_RS08960 0.89 -0.8 304,445 + -1.8 304,446 - +0.2 304,465 + +0.2 304,465 + -0.0 304,465 + +0.6 304,465 + +0.3 304,466 - +0.3 304,466 - +0.7 304,469 - -0.4 304,500 - +0.4 304,500 - -0.9 304,500 - +0.0 304,500 - -0.1 304,500 - +0.3 304,500 - -0.5 304,500 - -0.0 304,546 + +0.2 304,547 - +0.4 304,547 - +0.5 304,547 - +0.5 304,547 - +2.2 304,547 - +0.8 304,547 - +0.0 304,593 - +0.4 304,593 - -1.0 304,593 - -0.6 304,593 - -1.3 304,642 + -0.4 304,642 + +0.4 304,643 - -0.0 304,654 + +0.0 304,654 + +1.0 304,654 + -1.2 304,681 + +0.2 304,681 + -1.2 304,682 - +0.9 304,685 - +0.1 304,685 - +0.7 304,699 + +0.4 304,699 + +0.4 304,700 - +0.7 304,713 - +0.7 304,713 - +0.5 304,713 - +0.3 304,721 + +0.1 304,721 + +0.8 304,721 + +0.2 304,721 + -1.0 304,721 + -0.3 304,721 + +0.2 304,722 - -1.5 304,722 - -1.0 304,722 - -0.4 304,722 - +0.1 304,722 - +0.6 304,722 - +0.4 304,722 - +0.6 304,722 - +0.9 304,722 - -0.3 304,722 - +0.2 304,722 - -0.1 304,722 - +0.3 304,722 - -0.6 304,724 + +0.3 304,724 + -0.4 304,725 - +0.5 304,725 - +1.6 304,725 - +0.2 304,725 - -0.4 304,725 - -1.2 304,725 - -0.1 304,749 + -0.2 304,749 + +0.2 304,749 + +0.9 304,749 + -0.5 304,749 + +0.3 304,749 + -0.7 304,749 + -0.2 304,749 + -0.0 304,749 + -0.5 304,749 + -2.2 304,749 + -1.2 304,749 + +0.5 304,749 + -1.2 304,749 + -0.0 304,749 + -0.5 304,750 - -0.3 304,750 - +0.9 304,750 - +2.0 304,750 - -0.1 304,750 - -0.0 304,750 - -0.6 304,750 - -0.3 304,750 - -0.8 304,750 - -0.0 304,750 - -0.4 304,750 - -0.1
Or see this region's nucleotide sequence