Experiment: L-Serine (N); RCH2 media; shaking
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS06675 and EX31_RS06680 overlap by 4 nucleotides EX31_RS06680 and EX31_RS06685 are separated by 5 nucleotides
EX31_RS06675: EX31_RS06675 - cellulose biosynthesis protein BcsG, at 114,335 to 115,981
_RS06675
EX31_RS06680: EX31_RS06680 - cellulose biosynthesis protein BcsF, at 115,978 to 116,211
_RS06680
EX31_RS06685: EX31_RS06685 - cellulose biosynthesis protein BcsE, at 116,217 to 117,815
_RS06685
Position (kb)
115
116
117 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 115.013 kb on - strand, within EX31_RS06675 at 115.020 kb on + strand, within EX31_RS06675 at 115.020 kb on + strand, within EX31_RS06675 at 115.024 kb on + strand, within EX31_RS06675 at 115.386 kb on - strand, within EX31_RS06675 at 115.390 kb on - strand, within EX31_RS06675 at 115.433 kb on - strand, within EX31_RS06675 at 115.590 kb on - strand, within EX31_RS06675 at 115.591 kb on + strand, within EX31_RS06675 at 115.591 kb on + strand, within EX31_RS06675 at 115.592 kb on - strand, within EX31_RS06675 at 115.821 kb on - strand at 115.870 kb on - strand at 115.905 kb on + strand at 115.981 kb on + strand at 115.982 kb on - strand at 116.028 kb on + strand, within EX31_RS06680 at 116.029 kb on - strand, within EX31_RS06680 at 116.050 kb on - strand, within EX31_RS06680 at 116.050 kb on - strand, within EX31_RS06680 at 116.197 kb on - strand at 116.448 kb on - strand, within EX31_RS06685 at 116.610 kb on + strand, within EX31_RS06685 at 116.654 kb on + strand, within EX31_RS06685 at 116.692 kb on + strand, within EX31_RS06685 at 116.693 kb on - strand, within EX31_RS06685 at 116.699 kb on + strand, within EX31_RS06685 at 116.700 kb on - strand, within EX31_RS06685 at 116.700 kb on - strand, within EX31_RS06685 at 116.760 kb on - strand, within EX31_RS06685 at 116.760 kb on - strand, within EX31_RS06685 at 116.761 kb on + strand, within EX31_RS06685 at 116.761 kb on + strand, within EX31_RS06685 at 116.761 kb on + strand, within EX31_RS06685 at 116.761 kb on + strand, within EX31_RS06685 at 116.762 kb on - strand, within EX31_RS06685 at 116.762 kb on - strand, within EX31_RS06685 at 116.762 kb on - strand, within EX31_RS06685 at 116.869 kb on + strand, within EX31_RS06685 at 116.870 kb on - strand, within EX31_RS06685 at 116.908 kb on - strand, within EX31_RS06685 at 117.204 kb on - strand, within EX31_RS06685 at 117.204 kb on - strand, within EX31_RS06685 at 117.204 kb on - strand, within EX31_RS06685
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N); RCH2 media; shaking remove 115,013 - EX31_RS06675 0.41 +0.0 115,020 + EX31_RS06675 0.42 +0.6 115,020 + EX31_RS06675 0.42 +1.8 115,024 + EX31_RS06675 0.42 -0.6 115,386 - EX31_RS06675 0.64 +0.0 115,390 - EX31_RS06675 0.64 +0.0 115,433 - EX31_RS06675 0.67 +0.6 115,590 - EX31_RS06675 0.76 +0.5 115,591 + EX31_RS06675 0.76 +2.6 115,591 + EX31_RS06675 0.76 -0.7 115,592 - EX31_RS06675 0.76 +0.3 115,821 - +0.7 115,870 - +1.2 115,905 + -0.6 115,981 + -0.6 115,982 - +1.6 116,028 + EX31_RS06680 0.21 +0.0 116,029 - EX31_RS06680 0.22 +0.6 116,050 - EX31_RS06680 0.31 -0.4 116,050 - EX31_RS06680 0.31 -1.1 116,197 - -0.4 116,448 - EX31_RS06685 0.14 +1.3 116,610 + EX31_RS06685 0.25 -2.1 116,654 + EX31_RS06685 0.27 +0.6 116,692 + EX31_RS06685 0.30 +0.3 116,693 - EX31_RS06685 0.30 +1.6 116,699 + EX31_RS06685 0.30 +1.2 116,700 - EX31_RS06685 0.30 +0.6 116,700 - EX31_RS06685 0.30 -0.5 116,760 - EX31_RS06685 0.34 -0.6 116,760 - EX31_RS06685 0.34 -1.0 116,761 + EX31_RS06685 0.34 -0.4 116,761 + EX31_RS06685 0.34 +1.4 116,761 + EX31_RS06685 0.34 -0.4 116,761 + EX31_RS06685 0.34 +0.6 116,762 - EX31_RS06685 0.34 -2.5 116,762 - EX31_RS06685 0.34 +1.6 116,762 - EX31_RS06685 0.34 +0.3 116,869 + EX31_RS06685 0.41 -1.7 116,870 - EX31_RS06685 0.41 +0.7 116,908 - EX31_RS06685 0.43 +0.3 117,204 - EX31_RS06685 0.62 +0.1 117,204 - EX31_RS06685 0.62 +0.3 117,204 - EX31_RS06685 0.62 -1.4
Or see this region's nucleotide sequence