Experiment: L-Serine (N); RCH2 media; shaking
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS06080 and EX31_RS06085 are separated by 132 nucleotides EX31_RS06085 and EX31_RS06090 are separated by 271 nucleotides EX31_RS06090 and EX31_RS06095 are separated by 27 nucleotides
EX31_RS06080: EX31_RS06080 - glutamine--fructose-6-phosphate transaminase (isomerizing), at 376,518 to 378,347
_RS06080
EX31_RS06085: EX31_RS06085 - bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU, at 378,480 to 379,850
_RS06085
EX31_RS06090: EX31_RS06090 - F0F1 ATP synthase subunit epsilon, at 380,122 to 380,544
_RS06090
EX31_RS06095: EX31_RS06095 - F0F1 ATP synthase subunit beta, at 380,572 to 381,954
_RS06095
Position (kb) 378
379
380 Strain fitness (log2 ratio) -2
-1
0
1 at 378.361 kb on - strand at 378.405 kb on - strand at 378.430 kb on - strand at 378.430 kb on - strand at 378.430 kb on - strand at 378.430 kb on - strand at 378.430 kb on - strand at 378.453 kb on - strand at 378.453 kb on - strand at 378.453 kb on - strand at 378.453 kb on - strand at 378.453 kb on - strand at 378.453 kb on - strand at 378.471 kb on - strand at 378.482 kb on - strand at 379.908 kb on - strand at 379.908 kb on - strand at 379.908 kb on - strand at 379.958 kb on + strand at 379.958 kb on + strand at 379.960 kb on + strand at 379.960 kb on + strand at 379.960 kb on + strand at 379.961 kb on - strand at 379.961 kb on - strand at 379.961 kb on - strand at 379.961 kb on - strand at 379.961 kb on - strand at 379.961 kb on - strand at 379.967 kb on + strand at 379.969 kb on + strand at 379.969 kb on + strand at 379.970 kb on - strand at 379.974 kb on + strand at 379.974 kb on + strand at 379.974 kb on + strand at 379.975 kb on - strand at 379.975 kb on - strand at 379.975 kb on - strand at 379.975 kb on - strand at 379.995 kb on - strand at 380.039 kb on + strand at 380.039 kb on + strand at 380.040 kb on - strand at 380.070 kb on + strand at 380.070 kb on + strand at 380.074 kb on - strand at 380.123 kb on + strand at 380.124 kb on - strand at 380.124 kb on - strand at 380.124 kb on - strand at 380.124 kb on - strand at 380.124 kb on - strand at 380.124 kb on - strand at 380.124 kb on - strand at 380.224 kb on - strand, within EX31_RS06090 at 380.224 kb on - strand, within EX31_RS06090
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N); RCH2 media; shaking remove 378,361 - -0.8 378,405 - -0.4 378,430 - +0.2 378,430 - +0.1 378,430 - +0.2 378,430 - +1.0 378,430 - +0.1 378,453 - +0.2 378,453 - +0.4 378,453 - +0.3 378,453 - -0.5 378,453 - +0.4 378,453 - -0.4 378,471 - +1.5 378,482 - -0.1 379,908 - +0.8 379,908 - +0.4 379,908 - +0.8 379,958 + +0.5 379,958 + +0.5 379,960 + +0.5 379,960 + +0.3 379,960 + +1.0 379,961 - +0.3 379,961 - +0.1 379,961 - -0.3 379,961 - +0.7 379,961 - +0.3 379,961 - +0.7 379,967 + -0.1 379,969 + -1.0 379,969 + -0.7 379,970 - +0.0 379,974 + +0.6 379,974 + -0.9 379,974 + -2.3 379,975 - -1.2 379,975 - +1.0 379,975 - +0.8 379,975 - -0.8 379,995 - -0.6 380,039 + -0.9 380,039 + +0.2 380,040 - +0.3 380,070 + -0.2 380,070 + -0.2 380,074 - +0.2 380,123 + +1.7 380,124 - -0.8 380,124 - -0.8 380,124 - -0.3 380,124 - -0.4 380,124 - +0.7 380,124 - -0.2 380,124 - -0.3 380,224 - EX31_RS06090 0.24 +0.7 380,224 - EX31_RS06090 0.24 -1.3
Or see this region's nucleotide sequence