Experiment: L-Serine (N); RCH2 media; shaking
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS03535 and EX31_RS03540 are separated by 242 nucleotides EX31_RS03540 and EX31_RS03545 are separated by 25 nucleotides EX31_RS03545 and EX31_RS03550 are separated by 9 nucleotides
EX31_RS03535: EX31_RS03535 - GMP reductase, at 201,947 to 202,990
_RS03535
EX31_RS03540: EX31_RS03540 - dephospho-CoA kinase, at 203,233 to 203,829
_RS03540
EX31_RS03545: EX31_RS03545 - cell division protein ZapD, at 203,855 to 204,607
_RS03545
EX31_RS03550: EX31_RS03550 - DNA gyrase inhibitor YacG, at 204,617 to 204,814
_RS03550
Position (kb) 203
204 Strain fitness (log2 ratio) -2
-1
0
1
2 at 202.432 kb on + strand, within EX31_RS03535 at 202.432 kb on + strand, within EX31_RS03535 at 202.433 kb on - strand, within EX31_RS03535 at 202.433 kb on - strand, within EX31_RS03535 at 202.433 kb on - strand, within EX31_RS03535 at 202.433 kb on - strand, within EX31_RS03535 at 202.436 kb on + strand, within EX31_RS03535 at 202.436 kb on + strand, within EX31_RS03535 at 202.437 kb on - strand, within EX31_RS03535 at 202.437 kb on - strand, within EX31_RS03535 at 202.437 kb on - strand, within EX31_RS03535 at 202.437 kb on - strand, within EX31_RS03535 at 202.463 kb on + strand, within EX31_RS03535 at 202.464 kb on - strand, within EX31_RS03535 at 202.464 kb on - strand, within EX31_RS03535 at 202.469 kb on - strand, within EX31_RS03535 at 202.557 kb on - strand, within EX31_RS03535 at 202.590 kb on + strand, within EX31_RS03535 at 202.598 kb on - strand, within EX31_RS03535 at 202.688 kb on + strand, within EX31_RS03535 at 202.689 kb on - strand, within EX31_RS03535 at 202.696 kb on + strand, within EX31_RS03535 at 202.696 kb on + strand, within EX31_RS03535 at 202.696 kb on + strand, within EX31_RS03535 at 202.696 kb on + strand, within EX31_RS03535 at 202.696 kb on + strand, within EX31_RS03535 at 202.696 kb on + strand, within EX31_RS03535 at 202.697 kb on - strand, within EX31_RS03535 at 202.697 kb on - strand, within EX31_RS03535 at 202.699 kb on + strand, within EX31_RS03535 at 202.700 kb on - strand, within EX31_RS03535 at 202.700 kb on - strand, within EX31_RS03535 at 202.748 kb on + strand, within EX31_RS03535 at 202.755 kb on + strand, within EX31_RS03535 at 202.755 kb on + strand, within EX31_RS03535 at 202.755 kb on + strand, within EX31_RS03535 at 202.755 kb on + strand, within EX31_RS03535 at 202.756 kb on - strand, within EX31_RS03535 at 202.756 kb on - strand, within EX31_RS03535 at 202.756 kb on - strand, within EX31_RS03535 at 202.796 kb on + strand, within EX31_RS03535 at 202.843 kb on + strand, within EX31_RS03535 at 202.864 kb on + strand, within EX31_RS03535 at 202.865 kb on - strand, within EX31_RS03535 at 202.936 kb on + strand at 202.949 kb on + strand at 202.949 kb on + strand at 202.949 kb on + strand at 202.949 kb on + strand at 202.950 kb on - strand at 202.950 kb on - strand at 202.950 kb on - strand at 202.950 kb on - strand at 202.957 kb on + strand at 202.958 kb on - strand at 202.964 kb on + strand at 202.971 kb on - strand at 202.971 kb on - strand at 202.998 kb on + strand at 202.999 kb on - strand at 203.070 kb on + strand at 203.070 kb on + strand at 203.070 kb on + strand at 203.070 kb on + strand at 203.070 kb on + strand at 203.071 kb on - strand at 203.071 kb on - strand at 203.071 kb on - strand at 203.103 kb on + strand at 203.103 kb on + strand at 203.103 kb on + strand at 203.103 kb on + strand at 203.103 kb on + strand at 203.104 kb on - strand at 203.104 kb on - strand at 203.104 kb on - strand at 203.142 kb on - strand at 203.182 kb on + strand at 203.182 kb on + strand at 203.188 kb on + strand at 203.189 kb on - strand at 203.204 kb on + strand at 203.208 kb on + strand at 203.208 kb on + strand at 203.208 kb on + strand at 203.209 kb on - strand at 203.209 kb on - strand at 203.212 kb on + strand at 203.212 kb on + strand at 203.239 kb on + strand at 203.239 kb on + strand at 203.239 kb on + strand at 203.239 kb on + strand at 203.239 kb on + strand at 203.239 kb on + strand at 203.241 kb on + strand at 203.798 kb on + strand at 203.798 kb on + strand at 203.798 kb on + strand at 203.798 kb on + strand at 203.798 kb on + strand at 203.798 kb on + strand at 203.798 kb on + strand at 203.798 kb on + strand at 203.799 kb on - strand at 203.799 kb on - strand at 203.865 kb on + strand at 203.865 kb on + strand at 203.865 kb on + strand at 203.865 kb on + strand at 203.865 kb on + strand at 203.865 kb on + strand at 203.865 kb on + strand at 203.865 kb on + strand at 203.866 kb on - strand at 203.866 kb on - strand at 203.866 kb on - strand at 203.866 kb on - strand at 203.866 kb on - strand at 203.866 kb on - strand at 203.866 kb on - strand at 203.866 kb on - strand at 204.012 kb on + strand, within EX31_RS03545 at 204.013 kb on - strand, within EX31_RS03545 at 204.117 kb on + strand, within EX31_RS03545 at 204.117 kb on + strand, within EX31_RS03545 at 204.118 kb on - strand, within EX31_RS03545 at 204.118 kb on - strand, within EX31_RS03545 at 204.148 kb on + strand, within EX31_RS03545 at 204.148 kb on + strand, within EX31_RS03545 at 204.283 kb on + strand, within EX31_RS03545 at 204.358 kb on + strand, within EX31_RS03545 at 204.375 kb on + strand, within EX31_RS03545 at 204.375 kb on + strand, within EX31_RS03545 at 204.375 kb on + strand, within EX31_RS03545 at 204.376 kb on - strand, within EX31_RS03545 at 204.507 kb on + strand, within EX31_RS03545 at 204.507 kb on + strand, within EX31_RS03545 at 204.507 kb on + strand, within EX31_RS03545 at 204.507 kb on + strand, within EX31_RS03545 at 204.508 kb on - strand, within EX31_RS03545 at 204.517 kb on + strand, within EX31_RS03545 at 204.517 kb on + strand, within EX31_RS03545 at 204.605 kb on + strand at 204.639 kb on + strand, within EX31_RS03550 at 204.639 kb on + strand, within EX31_RS03550 at 204.640 kb on - strand, within EX31_RS03550 at 204.721 kb on + strand, within EX31_RS03550 at 204.722 kb on - strand, within EX31_RS03550 at 204.766 kb on + strand, within EX31_RS03550 at 204.766 kb on + strand, within EX31_RS03550 at 204.766 kb on + strand, within EX31_RS03550 at 204.767 kb on - strand, within EX31_RS03550 at 204.812 kb on + strand at 204.812 kb on + strand at 204.812 kb on + strand at 204.828 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N); RCH2 media; shaking remove 202,432 + EX31_RS03535 0.46 -1.5 202,432 + EX31_RS03535 0.46 -0.9 202,433 - EX31_RS03535 0.47 +0.2 202,433 - EX31_RS03535 0.47 +1.3 202,433 - EX31_RS03535 0.47 -0.4 202,433 - EX31_RS03535 0.47 +0.9 202,436 + EX31_RS03535 0.47 +0.8 202,436 + EX31_RS03535 0.47 -0.4 202,437 - EX31_RS03535 0.47 +0.9 202,437 - EX31_RS03535 0.47 +1.2 202,437 - EX31_RS03535 0.47 +0.9 202,437 - EX31_RS03535 0.47 -0.2 202,463 + EX31_RS03535 0.49 -0.2 202,464 - EX31_RS03535 0.50 +0.8 202,464 - EX31_RS03535 0.50 -0.2 202,469 - EX31_RS03535 0.50 +0.2 202,557 - EX31_RS03535 0.58 +0.5 202,590 + EX31_RS03535 0.62 -1.1 202,598 - EX31_RS03535 0.62 +1.2 202,688 + EX31_RS03535 0.71 +1.6 202,689 - EX31_RS03535 0.71 +0.6 202,696 + EX31_RS03535 0.72 +0.8 202,696 + EX31_RS03535 0.72 +0.5 202,696 + EX31_RS03535 0.72 -0.2 202,696 + EX31_RS03535 0.72 +0.9 202,696 + EX31_RS03535 0.72 +0.4 202,696 + EX31_RS03535 0.72 -0.2 202,697 - EX31_RS03535 0.72 +0.6 202,697 - EX31_RS03535 0.72 -1.5 202,699 + EX31_RS03535 0.72 +1.8 202,700 - EX31_RS03535 0.72 +0.1 202,700 - EX31_RS03535 0.72 +0.6 202,748 + EX31_RS03535 0.77 +1.3 202,755 + EX31_RS03535 0.77 -0.2 202,755 + EX31_RS03535 0.77 +0.8 202,755 + EX31_RS03535 0.77 +0.1 202,755 + EX31_RS03535 0.77 +1.0 202,756 - EX31_RS03535 0.77 +0.3 202,756 - EX31_RS03535 0.77 -1.5 202,756 - EX31_RS03535 0.77 -0.1 202,796 + EX31_RS03535 0.81 -0.3 202,843 + EX31_RS03535 0.86 +0.4 202,864 + EX31_RS03535 0.88 -2.2 202,865 - EX31_RS03535 0.88 -1.5 202,936 + -1.6 202,949 + -0.8 202,949 + -1.1 202,949 + -0.3 202,949 + +0.1 202,950 - +0.0 202,950 - -0.4 202,950 - +1.2 202,950 - -0.1 202,957 + -0.2 202,958 - +0.3 202,964 + +0.9 202,971 - +0.5 202,971 - +0.1 202,998 + +0.2 202,999 - -0.3 203,070 + +0.6 203,070 + +0.3 203,070 + -0.1 203,070 + +0.6 203,070 + -0.6 203,071 - +0.2 203,071 - -0.1 203,071 - -1.1 203,103 + +1.0 203,103 + +0.1 203,103 + +0.9 203,103 + -0.7 203,103 + -0.3 203,104 - -0.0 203,104 - -0.5 203,104 - -0.9 203,142 - -2.2 203,182 + +0.1 203,182 + -1.1 203,188 + +1.0 203,189 - +0.2 203,204 + +0.8 203,208 + +0.0 203,208 + -0.4 203,208 + +0.9 203,209 - -0.4 203,209 - +1.2 203,212 + +0.1 203,212 + -1.0 203,239 + -1.7 203,239 + +0.7 203,239 + -1.1 203,239 + -0.6 203,239 + +0.3 203,239 + -0.3 203,241 + +0.1 203,798 + +1.1 203,798 + -2.6 203,798 + -1.3 203,798 + +2.2 203,798 + -1.5 203,798 + -1.4 203,798 + +0.6 203,798 + -1.1 203,799 - -0.0 203,799 - +0.0 203,865 + -0.1 203,865 + -0.2 203,865 + +0.2 203,865 + +0.5 203,865 + -0.5 203,865 + +0.6 203,865 + -1.4 203,865 + -0.6 203,866 - +0.0 203,866 - -0.5 203,866 - +2.0 203,866 - +0.2 203,866 - -0.3 203,866 - +0.7 203,866 - +0.1 203,866 - -0.2 204,012 + EX31_RS03545 0.21 +0.3 204,013 - EX31_RS03545 0.21 +0.5 204,117 + EX31_RS03545 0.35 +1.2 204,117 + EX31_RS03545 0.35 +0.9 204,118 - EX31_RS03545 0.35 +0.5 204,118 - EX31_RS03545 0.35 +0.3 204,148 + EX31_RS03545 0.39 -0.8 204,148 + EX31_RS03545 0.39 +0.9 204,283 + EX31_RS03545 0.57 +0.8 204,358 + EX31_RS03545 0.67 +0.1 204,375 + EX31_RS03545 0.69 -0.1 204,375 + EX31_RS03545 0.69 -0.2 204,375 + EX31_RS03545 0.69 +0.4 204,376 - EX31_RS03545 0.69 +0.5 204,507 + EX31_RS03545 0.87 -0.2 204,507 + EX31_RS03545 0.87 +0.0 204,507 + EX31_RS03545 0.87 +0.2 204,507 + EX31_RS03545 0.87 +0.1 204,508 - EX31_RS03545 0.87 +1.0 204,517 + EX31_RS03545 0.88 +0.4 204,517 + EX31_RS03545 0.88 -1.2 204,605 + +0.9 204,639 + EX31_RS03550 0.11 +0.4 204,639 + EX31_RS03550 0.11 -0.3 204,640 - EX31_RS03550 0.12 +1.5 204,721 + EX31_RS03550 0.53 -0.3 204,722 - EX31_RS03550 0.53 -1.0 204,766 + EX31_RS03550 0.75 +0.8 204,766 + EX31_RS03550 0.75 -0.6 204,766 + EX31_RS03550 0.75 -0.2 204,767 - EX31_RS03550 0.76 +1.5 204,812 + -0.2 204,812 + -0.1 204,812 + +0.2 204,828 + +0.4
Or see this region's nucleotide sequence