Experiment: L-Serine (N); RCH2 media; shaking
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX31_RS01015 and EX31_RS01020 are separated by 31 nucleotides EX31_RS01020 and EX31_RS01025 are separated by 38 nucleotides EX31_RS01025 and EX31_RS01030 are separated by 195 nucleotides
EX31_RS01015: EX31_RS01015 - type VI secretion system ATPase TssH, at 221,072 to 223,642
_RS01015
EX31_RS01020: EX31_RS01020 - hypothetical protein, at 223,674 to 225,011
_RS01020
EX31_RS01025: EX31_RS01025 - hypothetical protein, at 225,050 to 225,763
_RS01025
EX31_RS01030: EX31_RS01030 - low affinity potassium transporter Kup, at 225,959 to 227,833
_RS01030
Position (kb) 223
224
225
226 Strain fitness (log2 ratio) -2
-1
0
1
2 at 222.820 kb on + strand, within EX31_RS01015 at 222.903 kb on + strand, within EX31_RS01015 at 222.903 kb on + strand, within EX31_RS01015 at 222.903 kb on + strand, within EX31_RS01015 at 222.907 kb on + strand, within EX31_RS01015 at 222.907 kb on + strand, within EX31_RS01015 at 222.916 kb on + strand, within EX31_RS01015 at 222.917 kb on - strand, within EX31_RS01015 at 222.917 kb on - strand, within EX31_RS01015 at 222.917 kb on - strand, within EX31_RS01015 at 222.917 kb on - strand, within EX31_RS01015 at 222.917 kb on - strand, within EX31_RS01015 at 222.946 kb on - strand, within EX31_RS01015 at 223.028 kb on + strand, within EX31_RS01015 at 223.035 kb on + strand, within EX31_RS01015 at 223.036 kb on - strand, within EX31_RS01015 at 223.089 kb on - strand, within EX31_RS01015 at 223.095 kb on + strand, within EX31_RS01015 at 223.095 kb on + strand, within EX31_RS01015 at 223.159 kb on + strand, within EX31_RS01015 at 223.160 kb on - strand, within EX31_RS01015 at 223.265 kb on + strand, within EX31_RS01015 at 223.265 kb on + strand, within EX31_RS01015 at 223.265 kb on + strand, within EX31_RS01015 at 223.293 kb on + strand, within EX31_RS01015 at 223.397 kb on - strand at 223.658 kb on + strand at 223.750 kb on + strand at 223.751 kb on - strand at 223.830 kb on + strand, within EX31_RS01020 at 223.830 kb on + strand, within EX31_RS01020 at 223.883 kb on + strand, within EX31_RS01020 at 223.883 kb on + strand, within EX31_RS01020 at 224.027 kb on + strand, within EX31_RS01020 at 224.027 kb on + strand, within EX31_RS01020 at 224.027 kb on + strand, within EX31_RS01020 at 224.027 kb on + strand, within EX31_RS01020 at 224.031 kb on + strand, within EX31_RS01020 at 224.031 kb on + strand, within EX31_RS01020 at 224.032 kb on - strand, within EX31_RS01020 at 224.032 kb on - strand, within EX31_RS01020 at 224.032 kb on - strand, within EX31_RS01020 at 224.078 kb on - strand, within EX31_RS01020 at 224.078 kb on - strand, within EX31_RS01020 at 224.238 kb on - strand, within EX31_RS01020 at 224.252 kb on - strand, within EX31_RS01020 at 224.294 kb on - strand, within EX31_RS01020 at 224.294 kb on - strand, within EX31_RS01020 at 224.302 kb on + strand, within EX31_RS01020 at 224.302 kb on + strand, within EX31_RS01020 at 224.302 kb on + strand, within EX31_RS01020 at 224.302 kb on + strand, within EX31_RS01020 at 224.491 kb on + strand, within EX31_RS01020 at 224.492 kb on - strand, within EX31_RS01020 at 224.602 kb on + strand, within EX31_RS01020 at 224.602 kb on + strand, within EX31_RS01020 at 224.602 kb on + strand, within EX31_RS01020 at 224.603 kb on - strand, within EX31_RS01020 at 224.603 kb on - strand, within EX31_RS01020 at 224.623 kb on + strand, within EX31_RS01020 at 224.623 kb on + strand, within EX31_RS01020 at 224.624 kb on - strand, within EX31_RS01020 at 224.664 kb on + strand, within EX31_RS01020 at 224.689 kb on + strand, within EX31_RS01020 at 224.690 kb on - strand, within EX31_RS01020 at 224.708 kb on + strand, within EX31_RS01020 at 224.709 kb on - strand, within EX31_RS01020 at 224.739 kb on - strand, within EX31_RS01020 at 224.741 kb on + strand, within EX31_RS01020 at 224.742 kb on - strand, within EX31_RS01020 at 224.799 kb on + strand, within EX31_RS01020 at 224.800 kb on - strand, within EX31_RS01020 at 224.800 kb on - strand, within EX31_RS01020 at 224.831 kb on - strand, within EX31_RS01020 at 224.839 kb on + strand, within EX31_RS01020 at 224.939 kb on - strand at 224.989 kb on - strand at 225.022 kb on - strand at 225.028 kb on - strand at 225.164 kb on + strand, within EX31_RS01025 at 225.165 kb on - strand, within EX31_RS01025 at 225.172 kb on + strand, within EX31_RS01025 at 225.309 kb on + strand, within EX31_RS01025 at 225.353 kb on - strand, within EX31_RS01025 at 225.378 kb on + strand, within EX31_RS01025 at 225.379 kb on - strand, within EX31_RS01025 at 225.380 kb on - strand, within EX31_RS01025 at 225.419 kb on + strand, within EX31_RS01025 at 225.419 kb on + strand, within EX31_RS01025 at 225.419 kb on + strand, within EX31_RS01025 at 225.420 kb on - strand, within EX31_RS01025 at 225.540 kb on - strand, within EX31_RS01025 at 225.586 kb on + strand, within EX31_RS01025 at 225.586 kb on + strand, within EX31_RS01025 at 225.586 kb on + strand, within EX31_RS01025 at 225.587 kb on - strand, within EX31_RS01025 at 225.590 kb on + strand, within EX31_RS01025 at 225.600 kb on + strand, within EX31_RS01025 at 225.646 kb on + strand, within EX31_RS01025 at 225.647 kb on - strand, within EX31_RS01025 at 225.647 kb on - strand, within EX31_RS01025 at 225.652 kb on + strand, within EX31_RS01025 at 225.654 kb on + strand, within EX31_RS01025 at 225.654 kb on + strand, within EX31_RS01025 at 225.654 kb on + strand, within EX31_RS01025 at 225.705 kb on + strand at 225.727 kb on + strand at 225.795 kb on + strand at 225.830 kb on + strand at 225.831 kb on - strand at 225.841 kb on + strand at 225.842 kb on - strand at 225.854 kb on + strand at 225.868 kb on - strand at 225.880 kb on + strand at 225.880 kb on + strand at 225.881 kb on - strand at 225.881 kb on - strand at 225.881 kb on - strand at 225.882 kb on + strand at 225.894 kb on + strand at 225.894 kb on + strand at 225.894 kb on + strand at 225.894 kb on + strand at 225.895 kb on - strand at 225.902 kb on + strand at 225.902 kb on + strand at 225.903 kb on - strand at 225.903 kb on - strand at 225.903 kb on - strand at 225.903 kb on - strand at 225.906 kb on + strand at 225.906 kb on + strand at 225.906 kb on + strand at 225.906 kb on + strand at 225.906 kb on + strand at 225.906 kb on + strand at 225.907 kb on - strand at 225.907 kb on - strand at 225.907 kb on - strand at 225.907 kb on - strand at 225.907 kb on - strand at 225.907 kb on - strand at 225.908 kb on + strand at 225.908 kb on + strand at 225.909 kb on - strand at 225.976 kb on + strand at 225.991 kb on + strand at 225.992 kb on - strand at 225.992 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N); RCH2 media; shaking remove 222,820 + EX31_RS01015 0.68 -1.3 222,903 + EX31_RS01015 0.71 -0.7 222,903 + EX31_RS01015 0.71 +0.9 222,903 + EX31_RS01015 0.71 -0.2 222,907 + EX31_RS01015 0.71 +0.5 222,907 + EX31_RS01015 0.71 -0.7 222,916 + EX31_RS01015 0.72 -0.4 222,917 - EX31_RS01015 0.72 -0.4 222,917 - EX31_RS01015 0.72 +1.3 222,917 - EX31_RS01015 0.72 +1.5 222,917 - EX31_RS01015 0.72 -0.3 222,917 - EX31_RS01015 0.72 -0.8 222,946 - EX31_RS01015 0.73 +1.2 223,028 + EX31_RS01015 0.76 +1.5 223,035 + EX31_RS01015 0.76 -1.1 223,036 - EX31_RS01015 0.76 -0.1 223,089 - EX31_RS01015 0.78 -1.8 223,095 + EX31_RS01015 0.79 -0.3 223,095 + EX31_RS01015 0.79 +0.6 223,159 + EX31_RS01015 0.81 +1.3 223,160 - EX31_RS01015 0.81 -0.4 223,265 + EX31_RS01015 0.85 +1.7 223,265 + EX31_RS01015 0.85 +0.8 223,265 + EX31_RS01015 0.85 +0.2 223,293 + EX31_RS01015 0.86 +0.1 223,397 - +0.2 223,658 + +1.2 223,750 + +0.1 223,751 - -1.7 223,830 + EX31_RS01020 0.12 -1.1 223,830 + EX31_RS01020 0.12 -0.2 223,883 + EX31_RS01020 0.16 -0.3 223,883 + EX31_RS01020 0.16 +0.1 224,027 + EX31_RS01020 0.26 -1.1 224,027 + EX31_RS01020 0.26 +1.8 224,027 + EX31_RS01020 0.26 +0.3 224,027 + EX31_RS01020 0.26 +0.1 224,031 + EX31_RS01020 0.27 -0.1 224,031 + EX31_RS01020 0.27 +0.1 224,032 - EX31_RS01020 0.27 +0.3 224,032 - EX31_RS01020 0.27 +0.1 224,032 - EX31_RS01020 0.27 +0.2 224,078 - EX31_RS01020 0.30 -0.5 224,078 - EX31_RS01020 0.30 -2.2 224,238 - EX31_RS01020 0.42 -1.0 224,252 - EX31_RS01020 0.43 +0.1 224,294 - EX31_RS01020 0.46 -0.3 224,294 - EX31_RS01020 0.46 -0.8 224,302 + EX31_RS01020 0.47 -0.8 224,302 + EX31_RS01020 0.47 +0.5 224,302 + EX31_RS01020 0.47 -0.6 224,302 + EX31_RS01020 0.47 +1.5 224,491 + EX31_RS01020 0.61 +0.1 224,492 - EX31_RS01020 0.61 +0.9 224,602 + EX31_RS01020 0.69 -0.7 224,602 + EX31_RS01020 0.69 -2.2 224,602 + EX31_RS01020 0.69 -0.4 224,603 - EX31_RS01020 0.69 -0.1 224,603 - EX31_RS01020 0.69 -1.3 224,623 + EX31_RS01020 0.71 +0.9 224,623 + EX31_RS01020 0.71 +0.8 224,624 - EX31_RS01020 0.71 +1.2 224,664 + EX31_RS01020 0.74 +0.2 224,689 + EX31_RS01020 0.76 -1.9 224,690 - EX31_RS01020 0.76 -0.8 224,708 + EX31_RS01020 0.77 -0.5 224,709 - EX31_RS01020 0.77 -1.7 224,739 - EX31_RS01020 0.80 -0.4 224,741 + EX31_RS01020 0.80 -1.2 224,742 - EX31_RS01020 0.80 +0.7 224,799 + EX31_RS01020 0.84 -0.8 224,800 - EX31_RS01020 0.84 +0.1 224,800 - EX31_RS01020 0.84 -0.7 224,831 - EX31_RS01020 0.86 +0.9 224,839 + EX31_RS01020 0.87 +1.7 224,939 - -0.2 224,989 - +0.2 225,022 - +0.6 225,028 - +0.1 225,164 + EX31_RS01025 0.16 -1.0 225,165 - EX31_RS01025 0.16 +1.5 225,172 + EX31_RS01025 0.17 -0.3 225,309 + EX31_RS01025 0.36 +0.3 225,353 - EX31_RS01025 0.42 -0.8 225,378 + EX31_RS01025 0.46 +0.1 225,379 - EX31_RS01025 0.46 -1.2 225,380 - EX31_RS01025 0.46 +0.9 225,419 + EX31_RS01025 0.52 -0.6 225,419 + EX31_RS01025 0.52 +0.2 225,419 + EX31_RS01025 0.52 +0.3 225,420 - EX31_RS01025 0.52 -2.1 225,540 - EX31_RS01025 0.69 -0.5 225,586 + EX31_RS01025 0.75 +0.2 225,586 + EX31_RS01025 0.75 -0.1 225,586 + EX31_RS01025 0.75 +0.1 225,587 - EX31_RS01025 0.75 -2.6 225,590 + EX31_RS01025 0.76 +0.6 225,600 + EX31_RS01025 0.77 -0.2 225,646 + EX31_RS01025 0.83 +0.4 225,647 - EX31_RS01025 0.84 -1.1 225,647 - EX31_RS01025 0.84 -1.1 225,652 + EX31_RS01025 0.84 -1.3 225,654 + EX31_RS01025 0.85 +0.8 225,654 + EX31_RS01025 0.85 +0.3 225,654 + EX31_RS01025 0.85 -0.4 225,705 + +0.8 225,727 + +0.6 225,795 + +1.2 225,830 + +1.6 225,831 - +1.6 225,841 + +0.4 225,842 - -1.3 225,854 + +0.2 225,868 - -0.6 225,880 + +1.4 225,880 + +1.8 225,881 - -0.4 225,881 - -1.1 225,881 - -0.1 225,882 + -1.2 225,894 + -1.4 225,894 + -0.3 225,894 + -0.5 225,894 + +1.2 225,895 - -0.1 225,902 + +0.6 225,902 + -0.2 225,903 - +0.3 225,903 - -0.9 225,903 - +1.4 225,903 - -0.7 225,906 + +0.8 225,906 + -0.7 225,906 + +1.3 225,906 + +0.9 225,906 + +0.5 225,906 + +0.5 225,907 - +0.1 225,907 - +0.2 225,907 - +1.2 225,907 - +1.2 225,907 - +1.9 225,907 - +0.3 225,908 + +0.2 225,908 + +1.5 225,909 - +0.2 225,976 + +1.5 225,991 + +0.9 225,992 - -0.2 225,992 - +1.2
Or see this region's nucleotide sequence