Experiment: sodium fluoride 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2027 and Ac3H11_2028 are separated by 193 nucleotides Ac3H11_2028 and Ac3H11_2029 are separated by 107 nucleotides
Ac3H11_2027 - Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17), at 245,719 to 247,635
_2027
Ac3H11_2028 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 247,829 to 249,481
_2028
Ac3H11_2029 - General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase), at 249,589 to 250,977
_2029
Position (kb) 247
248
249
250 Strain fitness (log2 ratio) -2
-1
0
1
2 at 246.838 kb on + strand, within Ac3H11_2027 at 246.838 kb on + strand, within Ac3H11_2027 at 246.839 kb on - strand, within Ac3H11_2027 at 246.839 kb on - strand, within Ac3H11_2027 at 246.877 kb on + strand, within Ac3H11_2027 at 246.877 kb on + strand, within Ac3H11_2027 at 246.878 kb on - strand, within Ac3H11_2027 at 247.099 kb on + strand, within Ac3H11_2027 at 247.099 kb on + strand, within Ac3H11_2027 at 247.100 kb on - strand, within Ac3H11_2027 at 247.138 kb on + strand, within Ac3H11_2027 at 247.138 kb on + strand, within Ac3H11_2027 at 247.138 kb on + strand, within Ac3H11_2027 at 247.138 kb on + strand, within Ac3H11_2027 at 247.139 kb on - strand, within Ac3H11_2027 at 247.139 kb on - strand, within Ac3H11_2027 at 247.204 kb on + strand, within Ac3H11_2027 at 247.204 kb on + strand, within Ac3H11_2027 at 247.204 kb on + strand, within Ac3H11_2027 at 247.204 kb on + strand, within Ac3H11_2027 at 247.205 kb on - strand, within Ac3H11_2027 at 247.205 kb on - strand, within Ac3H11_2027 at 247.205 kb on - strand, within Ac3H11_2027 at 247.205 kb on - strand, within Ac3H11_2027 at 247.205 kb on - strand, within Ac3H11_2027 at 247.205 kb on - strand, within Ac3H11_2027 at 247.270 kb on + strand, within Ac3H11_2027 at 247.270 kb on + strand, within Ac3H11_2027 at 247.270 kb on + strand, within Ac3H11_2027 at 247.271 kb on - strand, within Ac3H11_2027 at 247.271 kb on - strand, within Ac3H11_2027 at 247.271 kb on - strand, within Ac3H11_2027 at 247.414 kb on + strand, within Ac3H11_2027 at 247.414 kb on + strand, within Ac3H11_2027 at 247.415 kb on - strand, within Ac3H11_2027 at 247.415 kb on - strand, within Ac3H11_2027 at 247.612 kb on + strand at 247.612 kb on + strand at 247.612 kb on + strand at 247.612 kb on + strand at 247.612 kb on + strand at 247.612 kb on + strand at 247.612 kb on + strand at 247.612 kb on + strand at 247.612 kb on + strand at 247.612 kb on + strand at 247.612 kb on + strand at 247.612 kb on + strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.613 kb on - strand at 247.675 kb on + strand at 247.700 kb on + strand at 247.700 kb on + strand at 247.700 kb on + strand at 247.700 kb on + strand at 247.701 kb on - strand at 247.701 kb on - strand at 247.701 kb on - strand at 247.701 kb on - strand at 247.701 kb on - strand at 247.701 kb on - strand at 247.731 kb on + strand at 247.731 kb on + strand at 247.731 kb on + strand at 247.731 kb on + strand at 247.731 kb on + strand at 247.731 kb on + strand at 247.731 kb on + strand at 247.731 kb on + strand at 247.731 kb on + strand at 247.731 kb on + strand at 247.732 kb on - strand at 247.732 kb on - strand at 247.732 kb on - strand at 247.732 kb on - strand at 247.732 kb on - strand at 247.732 kb on - strand at 247.732 kb on - strand at 247.732 kb on - strand at 247.733 kb on + strand at 247.733 kb on + strand at 247.733 kb on + strand at 247.733 kb on + strand at 247.733 kb on + strand at 247.733 kb on + strand at 247.733 kb on + strand at 247.733 kb on + strand at 247.733 kb on + strand at 247.733 kb on + strand at 247.733 kb on + strand at 247.733 kb on + strand at 247.734 kb on - strand at 247.734 kb on - strand at 247.734 kb on - strand at 247.734 kb on - strand at 247.734 kb on - strand at 247.734 kb on - strand at 247.734 kb on - strand at 247.734 kb on - strand at 247.734 kb on - strand at 247.734 kb on - strand at 247.734 kb on - strand at 247.734 kb on - strand at 247.734 kb on - strand at 247.734 kb on - strand at 247.792 kb on - strand at 247.792 kb on - strand at 247.868 kb on + strand at 247.868 kb on + strand at 247.868 kb on + strand at 247.868 kb on + strand at 247.869 kb on - strand at 247.869 kb on - strand at 247.869 kb on - strand at 247.869 kb on - strand at 247.869 kb on - strand at 247.869 kb on - strand at 247.922 kb on + strand at 247.922 kb on + strand at 247.922 kb on + strand at 247.922 kb on + strand at 247.922 kb on + strand at 247.922 kb on + strand at 247.922 kb on + strand at 247.922 kb on + strand at 247.922 kb on + strand at 247.923 kb on - strand at 247.923 kb on - strand at 247.923 kb on - strand at 247.923 kb on - strand at 247.923 kb on - strand at 247.977 kb on + strand at 248.211 kb on - strand, within Ac3H11_2028 at 248.282 kb on + strand, within Ac3H11_2028 at 248.282 kb on + strand, within Ac3H11_2028 at 248.282 kb on + strand, within Ac3H11_2028 at 248.282 kb on + strand, within Ac3H11_2028 at 249.310 kb on + strand, within Ac3H11_2028 at 249.311 kb on - strand, within Ac3H11_2028 at 249.401 kb on + strand at 249.401 kb on + strand at 249.401 kb on + strand at 249.401 kb on + strand at 249.401 kb on + strand at 249.502 kb on + strand at 249.503 kb on - strand at 249.524 kb on + strand at 249.524 kb on + strand at 249.525 kb on - strand at 249.630 kb on + strand at 249.630 kb on + strand at 249.839 kb on + strand, within Ac3H11_2029 at 249.840 kb on - strand, within Ac3H11_2029 at 249.840 kb on - strand, within Ac3H11_2029 at 250.137 kb on - strand, within Ac3H11_2029 at 250.202 kb on + strand, within Ac3H11_2029 at 250.202 kb on + strand, within Ac3H11_2029 at 250.202 kb on + strand, within Ac3H11_2029 at 250.202 kb on + strand, within Ac3H11_2029 at 250.203 kb on - strand, within Ac3H11_2029 at 250.203 kb on - strand, within Ac3H11_2029
Per-strain Table
Position Strand Gene LocusTag Fraction sodium fluoride 25 mM remove 246,838 + Ac3H11_2027 0.58 +0.9 246,838 + Ac3H11_2027 0.58 -0.1 246,839 - Ac3H11_2027 0.58 +0.0 246,839 - Ac3H11_2027 0.58 -0.2 246,877 + Ac3H11_2027 0.60 -0.1 246,877 + Ac3H11_2027 0.60 +2.0 246,878 - Ac3H11_2027 0.60 -0.6 247,099 + Ac3H11_2027 0.72 +0.9 247,099 + Ac3H11_2027 0.72 +0.2 247,100 - Ac3H11_2027 0.72 +0.3 247,138 + Ac3H11_2027 0.74 -1.3 247,138 + Ac3H11_2027 0.74 -1.5 247,138 + Ac3H11_2027 0.74 +0.2 247,138 + Ac3H11_2027 0.74 +0.5 247,139 - Ac3H11_2027 0.74 +0.6 247,139 - Ac3H11_2027 0.74 +0.7 247,204 + Ac3H11_2027 0.77 -0.3 247,204 + Ac3H11_2027 0.77 -0.1 247,204 + Ac3H11_2027 0.77 -0.9 247,204 + Ac3H11_2027 0.77 +0.7 247,205 - Ac3H11_2027 0.78 +0.3 247,205 - Ac3H11_2027 0.78 -0.2 247,205 - Ac3H11_2027 0.78 -0.1 247,205 - Ac3H11_2027 0.78 +1.0 247,205 - Ac3H11_2027 0.78 +0.1 247,205 - Ac3H11_2027 0.78 -0.4 247,270 + Ac3H11_2027 0.81 +0.5 247,270 + Ac3H11_2027 0.81 -0.8 247,270 + Ac3H11_2027 0.81 -0.2 247,271 - Ac3H11_2027 0.81 +1.1 247,271 - Ac3H11_2027 0.81 -0.5 247,271 - Ac3H11_2027 0.81 +0.3 247,414 + Ac3H11_2027 0.88 -0.1 247,414 + Ac3H11_2027 0.88 -0.7 247,415 - Ac3H11_2027 0.88 +1.2 247,415 - Ac3H11_2027 0.88 -0.2 247,612 + +1.2 247,612 + -2.1 247,612 + +0.1 247,612 + +0.2 247,612 + +1.0 247,612 + -0.3 247,612 + -0.6 247,612 + -0.1 247,612 + +0.2 247,612 + -0.2 247,612 + -0.3 247,612 + +0.5 247,613 - -0.5 247,613 - -0.4 247,613 - +0.6 247,613 - -0.8 247,613 - +0.3 247,613 - -0.5 247,613 - -1.1 247,613 - +1.1 247,613 - +1.2 247,613 - -0.5 247,613 - -0.8 247,613 - -0.7 247,613 - +0.4 247,613 - -1.0 247,613 - -0.8 247,613 - +0.2 247,613 - -0.4 247,613 - -0.1 247,613 - -0.1 247,675 + +0.0 247,700 + -0.1 247,700 + +0.4 247,700 + +1.1 247,700 + -0.1 247,701 - -0.6 247,701 - +0.7 247,701 - -0.4 247,701 - +0.3 247,701 - +0.3 247,701 - +0.3 247,731 + -0.3 247,731 + +0.4 247,731 + -0.9 247,731 + +0.4 247,731 + +0.0 247,731 + +0.4 247,731 + +0.3 247,731 + -0.3 247,731 + +1.0 247,731 + +0.1 247,732 - -0.2 247,732 - -0.2 247,732 - -1.1 247,732 - +0.5 247,732 - +0.6 247,732 - -0.0 247,732 - +0.6 247,732 - +1.4 247,733 + +0.8 247,733 + -0.2 247,733 + +0.2 247,733 + +0.9 247,733 + -0.1 247,733 + +0.5 247,733 + +0.5 247,733 + -0.7 247,733 + +1.6 247,733 + -1.0 247,733 + -1.1 247,733 + +0.0 247,734 - +0.2 247,734 - -1.2 247,734 - -0.3 247,734 - +0.9 247,734 - +0.4 247,734 - -0.8 247,734 - +0.7 247,734 - -0.1 247,734 - -0.5 247,734 - +0.8 247,734 - -0.2 247,734 - -0.7 247,734 - +1.2 247,734 - +0.1 247,792 - +0.8 247,792 - +0.1 247,868 + -1.0 247,868 + -1.6 247,868 + +0.6 247,868 + -0.0 247,869 - -1.2 247,869 - +0.6 247,869 - +0.6 247,869 - -0.8 247,869 - -0.7 247,869 - -0.1 247,922 + +0.9 247,922 + +0.6 247,922 + +0.6 247,922 + +0.5 247,922 + +0.4 247,922 + -0.0 247,922 + -0.3 247,922 + -0.4 247,922 + -0.4 247,923 - -1.3 247,923 - +0.0 247,923 - +0.3 247,923 - +0.0 247,923 - -0.5 247,977 + -0.5 248,211 - Ac3H11_2028 0.23 -0.3 248,282 + Ac3H11_2028 0.27 +0.1 248,282 + Ac3H11_2028 0.27 -0.5 248,282 + Ac3H11_2028 0.27 +1.1 248,282 + Ac3H11_2028 0.27 -0.4 249,310 + Ac3H11_2028 0.90 +0.7 249,311 - Ac3H11_2028 0.90 +1.1 249,401 + -0.6 249,401 + -1.3 249,401 + +0.4 249,401 + +0.4 249,401 + +1.1 249,502 + +1.4 249,503 - -0.4 249,524 + -0.6 249,524 + -0.6 249,525 - +0.8 249,630 + +1.1 249,630 + +1.1 249,839 + Ac3H11_2029 0.18 +0.1 249,840 - Ac3H11_2029 0.18 +0.2 249,840 - Ac3H11_2029 0.18 +0.6 250,137 - Ac3H11_2029 0.39 +1.1 250,202 + Ac3H11_2029 0.44 +0.8 250,202 + Ac3H11_2029 0.44 +1.1 250,202 + Ac3H11_2029 0.44 +0.4 250,202 + Ac3H11_2029 0.44 +1.0 250,203 - Ac3H11_2029 0.44 +1.2 250,203 - Ac3H11_2029 0.44 +0.9
Or see this region's nucleotide sequence