Strain Fitness in Ralstonia solanacearum IBSBF1503 around RALBFv3_RS00445

Experiment: Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntRALBFv3_RS00440 and RALBFv3_RS00445 are separated by 5 nucleotidesRALBFv3_RS00445 and RALBFv3_RS00450 are separated by 27 nucleotidesRALBFv3_RS00450 and RALBFv3_RS00455 are separated by 139 nucleotides RALBFv3_RS00440: RALBFv3_RS00440 - lipid-A-disaccharide synthase, at 102,845 to 104,017 _RS00440 RALBFv3_RS00445: RALBFv3_RS00445 - ribonuclease HII, at 104,023 to 104,733 _RS00445 RALBFv3_RS00450: RALBFv3_RS00450 - RNA methyltransferase, at 104,761 to 105,540 _RS00450 RALBFv3_RS00455: RALBFv3_RS00455 - hypothetical protein, at 105,680 to 106,555 _RS00455 Position (kb) 104 105Strain fitness (log2 ratio) -1 0 1at 104.016 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Plant=Tomato_MoneyMaker; PlantTreatment=Petiole_stem_inoculation_Ralstonia; Sample=stem; Collection=Homogenized_filtered_pelleted
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104,016 - -0.0

Or see this region's nucleotide sequence