Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_902 and Ac3H11_903 are separated by 90 nucleotides Ac3H11_903 and Ac3H11_904 are separated by 183 nucleotides
Ac3H11_902 - Glycine cleavage system transcriptional activator, at 13,835 to 14,713
_902
Ac3H11_903 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 14,804 to 17,833
_903
Ac3H11_904 - Chemotactic transducer-related protein, at 18,017 to 19,645
_904
Position (kb) 14
15
16
17
18 Strain fitness (log2 ratio) -2
-1
0
1
2 at 14.784 kb on + strand at 14.805 kb on + strand at 14.805 kb on + strand at 14.805 kb on + strand at 14.805 kb on + strand at 14.805 kb on + strand at 14.805 kb on + strand at 14.806 kb on - strand at 14.806 kb on - strand at 14.806 kb on - strand at 15.064 kb on - strand at 15.240 kb on + strand, within Ac3H11_903 at 15.240 kb on + strand, within Ac3H11_903 at 15.240 kb on + strand, within Ac3H11_903 at 15.240 kb on + strand, within Ac3H11_903 at 15.240 kb on + strand, within Ac3H11_903 at 15.241 kb on - strand, within Ac3H11_903 at 15.241 kb on - strand, within Ac3H11_903 at 15.241 kb on - strand, within Ac3H11_903 at 15.281 kb on - strand, within Ac3H11_903 at 15.281 kb on - strand, within Ac3H11_903 at 15.486 kb on + strand, within Ac3H11_903 at 15.486 kb on + strand, within Ac3H11_903 at 15.486 kb on + strand, within Ac3H11_903 at 15.486 kb on + strand, within Ac3H11_903 at 15.499 kb on - strand, within Ac3H11_903 at 15.499 kb on - strand, within Ac3H11_903 at 15.538 kb on + strand, within Ac3H11_903 at 15.539 kb on - strand, within Ac3H11_903 at 15.539 kb on - strand, within Ac3H11_903 at 15.636 kb on + strand, within Ac3H11_903 at 15.636 kb on + strand, within Ac3H11_903 at 16.080 kb on + strand, within Ac3H11_903 at 16.113 kb on + strand, within Ac3H11_903 at 16.113 kb on + strand, within Ac3H11_903 at 16.114 kb on - strand, within Ac3H11_903 at 16.114 kb on - strand, within Ac3H11_903 at 16.114 kb on - strand, within Ac3H11_903 at 16.114 kb on - strand, within Ac3H11_903 at 16.114 kb on - strand, within Ac3H11_903 at 16.388 kb on + strand, within Ac3H11_903 at 16.389 kb on - strand, within Ac3H11_903 at 16.422 kb on + strand, within Ac3H11_903 at 16.423 kb on - strand, within Ac3H11_903 at 16.423 kb on - strand, within Ac3H11_903 at 16.521 kb on + strand, within Ac3H11_903 at 16.521 kb on + strand, within Ac3H11_903 at 16.521 kb on + strand, within Ac3H11_903 at 16.521 kb on + strand, within Ac3H11_903 at 16.522 kb on - strand, within Ac3H11_903 at 16.522 kb on - strand, within Ac3H11_903 at 16.728 kb on - strand, within Ac3H11_903 at 16.851 kb on + strand, within Ac3H11_903 at 16.852 kb on - strand, within Ac3H11_903 at 16.852 kb on - strand, within Ac3H11_903 at 16.852 kb on - strand, within Ac3H11_903 at 16.852 kb on - strand, within Ac3H11_903 at 16.915 kb on + strand, within Ac3H11_903 at 16.915 kb on + strand, within Ac3H11_903 at 16.916 kb on - strand, within Ac3H11_903 at 17.226 kb on + strand, within Ac3H11_903 at 17.226 kb on + strand, within Ac3H11_903 at 17.293 kb on - strand, within Ac3H11_903 at 17.349 kb on + strand, within Ac3H11_903 at 17.349 kb on + strand, within Ac3H11_903 at 17.350 kb on - strand, within Ac3H11_903 at 17.350 kb on - strand, within Ac3H11_903 at 17.382 kb on + strand, within Ac3H11_903 at 17.382 kb on + strand, within Ac3H11_903 at 17.382 kb on + strand, within Ac3H11_903 at 17.382 kb on + strand, within Ac3H11_903 at 17.383 kb on - strand, within Ac3H11_903 at 17.383 kb on - strand, within Ac3H11_903 at 17.436 kb on + strand, within Ac3H11_903 at 17.436 kb on + strand, within Ac3H11_903 at 17.436 kb on + strand, within Ac3H11_903 at 17.437 kb on - strand, within Ac3H11_903 at 17.496 kb on + strand, within Ac3H11_903 at 17.496 kb on + strand, within Ac3H11_903 at 17.497 kb on - strand, within Ac3H11_903 at 17.668 kb on + strand at 17.760 kb on + strand at 17.760 kb on + strand at 17.760 kb on + strand at 17.760 kb on + strand at 17.839 kb on + strand at 17.840 kb on - strand at 18.019 kb on - strand at 18.019 kb on - strand at 18.019 kb on - strand at 18.090 kb on + strand at 18.090 kb on + strand at 18.090 kb on + strand at 18.091 kb on - strand at 18.091 kb on - strand at 18.091 kb on - strand at 18.091 kb on - strand at 18.199 kb on - strand, within Ac3H11_904 at 18.199 kb on - strand, within Ac3H11_904 at 18.199 kb on - strand, within Ac3H11_904 at 18.333 kb on + strand, within Ac3H11_904 at 18.334 kb on - strand, within Ac3H11_904 at 18.405 kb on + strand, within Ac3H11_904 at 18.406 kb on - strand, within Ac3H11_904 at 18.406 kb on - strand, within Ac3H11_904 at 18.406 kb on - strand, within Ac3H11_904 at 18.406 kb on - strand, within Ac3H11_904 at 18.406 kb on - strand, within Ac3H11_904 at 18.406 kb on - strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.768 kb on + strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904 at 18.769 kb on - strand, within Ac3H11_904
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 14,784 + +0.9 14,805 + -0.3 14,805 + -0.7 14,805 + -1.3 14,805 + +0.2 14,805 + +0.1 14,805 + +0.5 14,806 - +0.9 14,806 - -0.9 14,806 - -1.2 15,064 - -0.8 15,240 + Ac3H11_903 0.14 +0.6 15,240 + Ac3H11_903 0.14 -1.9 15,240 + Ac3H11_903 0.14 +0.1 15,240 + Ac3H11_903 0.14 -0.7 15,240 + Ac3H11_903 0.14 +0.9 15,241 - Ac3H11_903 0.14 -0.0 15,241 - Ac3H11_903 0.14 +1.1 15,241 - Ac3H11_903 0.14 -0.5 15,281 - Ac3H11_903 0.16 +0.1 15,281 - Ac3H11_903 0.16 -1.8 15,486 + Ac3H11_903 0.23 -1.9 15,486 + Ac3H11_903 0.23 -0.1 15,486 + Ac3H11_903 0.23 +2.5 15,486 + Ac3H11_903 0.23 +0.8 15,499 - Ac3H11_903 0.23 -0.6 15,499 - Ac3H11_903 0.23 -0.3 15,538 + Ac3H11_903 0.24 -0.2 15,539 - Ac3H11_903 0.24 +0.9 15,539 - Ac3H11_903 0.24 -2.1 15,636 + Ac3H11_903 0.27 +0.4 15,636 + Ac3H11_903 0.27 +0.8 16,080 + Ac3H11_903 0.42 +0.2 16,113 + Ac3H11_903 0.43 +0.1 16,113 + Ac3H11_903 0.43 +1.0 16,114 - Ac3H11_903 0.43 +0.2 16,114 - Ac3H11_903 0.43 +1.0 16,114 - Ac3H11_903 0.43 +0.1 16,114 - Ac3H11_903 0.43 +1.4 16,114 - Ac3H11_903 0.43 +0.1 16,388 + Ac3H11_903 0.52 -0.8 16,389 - Ac3H11_903 0.52 -0.8 16,422 + Ac3H11_903 0.53 +1.8 16,423 - Ac3H11_903 0.53 -0.2 16,423 - Ac3H11_903 0.53 -0.0 16,521 + Ac3H11_903 0.57 +0.9 16,521 + Ac3H11_903 0.57 +0.4 16,521 + Ac3H11_903 0.57 +0.4 16,521 + Ac3H11_903 0.57 +0.1 16,522 - Ac3H11_903 0.57 -0.7 16,522 - Ac3H11_903 0.57 -0.0 16,728 - Ac3H11_903 0.63 -1.2 16,851 + Ac3H11_903 0.68 +1.0 16,852 - Ac3H11_903 0.68 +0.2 16,852 - Ac3H11_903 0.68 +0.9 16,852 - Ac3H11_903 0.68 +0.0 16,852 - Ac3H11_903 0.68 -0.3 16,915 + Ac3H11_903 0.70 +0.8 16,915 + Ac3H11_903 0.70 -1.0 16,916 - Ac3H11_903 0.70 +0.0 17,226 + Ac3H11_903 0.80 +0.1 17,226 + Ac3H11_903 0.80 -0.1 17,293 - Ac3H11_903 0.82 +2.0 17,349 + Ac3H11_903 0.84 -0.2 17,349 + Ac3H11_903 0.84 -0.1 17,350 - Ac3H11_903 0.84 -0.7 17,350 - Ac3H11_903 0.84 +0.4 17,382 + Ac3H11_903 0.85 -0.1 17,382 + Ac3H11_903 0.85 +0.4 17,382 + Ac3H11_903 0.85 +0.3 17,382 + Ac3H11_903 0.85 +0.6 17,383 - Ac3H11_903 0.85 +0.1 17,383 - Ac3H11_903 0.85 +1.6 17,436 + Ac3H11_903 0.87 +0.8 17,436 + Ac3H11_903 0.87 +0.4 17,436 + Ac3H11_903 0.87 -0.6 17,437 - Ac3H11_903 0.87 +0.2 17,496 + Ac3H11_903 0.89 +2.2 17,496 + Ac3H11_903 0.89 -0.0 17,497 - Ac3H11_903 0.89 -0.5 17,668 + +0.0 17,760 + -0.2 17,760 + +0.3 17,760 + +0.3 17,760 + -1.3 17,839 + +0.4 17,840 - +0.6 18,019 - +0.4 18,019 - -1.8 18,019 - +0.6 18,090 + -0.4 18,090 + -1.0 18,090 + +0.3 18,091 - -0.0 18,091 - -0.4 18,091 - -0.9 18,091 - +1.4 18,199 - Ac3H11_904 0.11 -0.7 18,199 - Ac3H11_904 0.11 +0.7 18,199 - Ac3H11_904 0.11 +0.1 18,333 + Ac3H11_904 0.19 -0.2 18,334 - Ac3H11_904 0.19 +0.5 18,405 + Ac3H11_904 0.24 -0.4 18,406 - Ac3H11_904 0.24 -0.9 18,406 - Ac3H11_904 0.24 +0.7 18,406 - Ac3H11_904 0.24 -0.3 18,406 - Ac3H11_904 0.24 +0.1 18,406 - Ac3H11_904 0.24 -1.1 18,406 - Ac3H11_904 0.24 +0.6 18,768 + Ac3H11_904 0.46 -0.1 18,768 + Ac3H11_904 0.46 -0.4 18,768 + Ac3H11_904 0.46 -0.0 18,768 + Ac3H11_904 0.46 -1.7 18,768 + Ac3H11_904 0.46 +0.5 18,768 + Ac3H11_904 0.46 +0.1 18,768 + Ac3H11_904 0.46 -1.0 18,769 - Ac3H11_904 0.46 +0.0 18,769 - Ac3H11_904 0.46 +0.4 18,769 - Ac3H11_904 0.46 -0.9 18,769 - Ac3H11_904 0.46 +0.4 18,769 - Ac3H11_904 0.46 +0.2
Or see this region's nucleotide sequence