Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_450

Experiment: copper (II) chloride 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_449 and Ac3H11_450 overlap by 1 nucleotidesAc3H11_450 and Ac3H11_451 overlap by 4 nucleotides Ac3H11_449 - Putative hemolysin, at 139,048 to 139,689 _449 Ac3H11_450 - Ser/Thr protein phosphatase family protein, UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.54) homolog, at 139,689 to 140,561 _450 Ac3H11_451 - Glycosyltransferase, at 140,558 to 141,649 _451 Position (kb) 139 140 141Strain fitness (log2 ratio) -2 -1 0 1at 138.693 kb on + strandat 138.693 kb on + strandat 138.693 kb on + strandat 138.693 kb on + strandat 138.694 kb on - strandat 138.694 kb on - strandat 139.160 kb on - strand, within Ac3H11_449at 139.205 kb on - strand, within Ac3H11_449at 139.205 kb on - strand, within Ac3H11_449at 139.205 kb on - strand, within Ac3H11_449at 139.205 kb on - strand, within Ac3H11_449at 139.445 kb on + strand, within Ac3H11_449at 139.446 kb on - strand, within Ac3H11_449at 139.446 kb on - strand, within Ac3H11_449at 139.475 kb on - strand, within Ac3H11_449at 139.475 kb on - strand, within Ac3H11_449at 139.559 kb on - strand, within Ac3H11_449at 139.890 kb on + strand, within Ac3H11_450at 139.890 kb on + strand, within Ac3H11_450at 139.891 kb on - strand, within Ac3H11_450at 139.891 kb on - strand, within Ac3H11_450at 140.096 kb on + strand, within Ac3H11_450at 140.096 kb on + strand, within Ac3H11_450at 140.097 kb on - strand, within Ac3H11_450at 140.097 kb on - strand, within Ac3H11_450at 140.097 kb on - strand, within Ac3H11_450at 140.097 kb on - strand, within Ac3H11_450at 140.179 kb on - strand, within Ac3H11_450at 140.196 kb on + strand, within Ac3H11_450at 140.197 kb on - strand, within Ac3H11_450at 140.260 kb on - strand, within Ac3H11_450at 140.277 kb on + strand, within Ac3H11_450at 140.277 kb on + strand, within Ac3H11_450at 140.310 kb on + strand, within Ac3H11_450at 140.310 kb on + strand, within Ac3H11_450at 140.310 kb on + strand, within Ac3H11_450at 140.310 kb on + strand, within Ac3H11_450at 140.310 kb on + strand, within Ac3H11_450at 140.310 kb on + strand, within Ac3H11_450at 140.310 kb on + strand, within Ac3H11_450at 140.311 kb on - strand, within Ac3H11_450at 140.311 kb on - strand, within Ac3H11_450at 140.311 kb on - strand, within Ac3H11_450at 140.311 kb on - strand, within Ac3H11_450at 140.311 kb on - strand, within Ac3H11_450at 140.374 kb on + strand, within Ac3H11_450at 140.375 kb on - strand, within Ac3H11_450at 140.375 kb on - strand, within Ac3H11_450at 140.424 kb on + strand, within Ac3H11_450at 140.425 kb on - strand, within Ac3H11_450at 140.425 kb on - strand, within Ac3H11_450at 140.708 kb on + strand, within Ac3H11_451at 140.924 kb on + strand, within Ac3H11_451at 141.082 kb on + strand, within Ac3H11_451at 141.083 kb on - strand, within Ac3H11_451at 141.122 kb on + strand, within Ac3H11_451at 141.122 kb on + strand, within Ac3H11_451at 141.122 kb on + strand, within Ac3H11_451at 141.122 kb on + strand, within Ac3H11_451at 141.122 kb on + strand, within Ac3H11_451at 141.122 kb on + strand, within Ac3H11_451at 141.122 kb on + strand, within Ac3H11_451at 141.122 kb on + strand, within Ac3H11_451at 141.122 kb on + strand, within Ac3H11_451at 141.123 kb on - strand, within Ac3H11_451at 141.123 kb on - strand, within Ac3H11_451at 141.123 kb on - strand, within Ac3H11_451at 141.123 kb on - strand, within Ac3H11_451at 141.123 kb on - strand, within Ac3H11_451at 141.123 kb on - strand, within Ac3H11_451at 141.123 kb on - strand, within Ac3H11_451at 141.123 kb on - strand, within Ac3H11_451at 141.123 kb on - strand, within Ac3H11_451at 141.123 kb on - strand, within Ac3H11_451at 141.123 kb on - strand, within Ac3H11_451at 141.123 kb on - strand, within Ac3H11_451at 141.236 kb on + strand, within Ac3H11_451at 141.237 kb on - strand, within Ac3H11_451at 141.290 kb on + strand, within Ac3H11_451

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Per-strain Table

Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM
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138,693 + -0.7
138,693 + +0.4
138,693 + +0.5
138,693 + +1.1
138,694 - -2.2
138,694 - -0.1
139,160 - Ac3H11_449 0.17 +0.3
139,205 - Ac3H11_449 0.24 -2.6
139,205 - Ac3H11_449 0.24 -1.0
139,205 - Ac3H11_449 0.24 +0.7
139,205 - Ac3H11_449 0.24 +0.7
139,445 + Ac3H11_449 0.62 +0.2
139,446 - Ac3H11_449 0.62 -0.2
139,446 - Ac3H11_449 0.62 -0.5
139,475 - Ac3H11_449 0.67 -0.6
139,475 - Ac3H11_449 0.67 +0.4
139,559 - Ac3H11_449 0.80 +0.4
139,890 + Ac3H11_450 0.23 +0.7
139,890 + Ac3H11_450 0.23 +0.5
139,891 - Ac3H11_450 0.23 +0.4
139,891 - Ac3H11_450 0.23 +0.5
140,096 + Ac3H11_450 0.47 +0.4
140,096 + Ac3H11_450 0.47 -0.1
140,097 - Ac3H11_450 0.47 +0.2
140,097 - Ac3H11_450 0.47 +0.0
140,097 - Ac3H11_450 0.47 -1.7
140,097 - Ac3H11_450 0.47 +0.3
140,179 - Ac3H11_450 0.56 -0.7
140,196 + Ac3H11_450 0.58 -1.8
140,197 - Ac3H11_450 0.58 +0.3
140,260 - Ac3H11_450 0.65 +0.1
140,277 + Ac3H11_450 0.67 +0.2
140,277 + Ac3H11_450 0.67 -0.3
140,310 + Ac3H11_450 0.71 +0.5
140,310 + Ac3H11_450 0.71 -0.6
140,310 + Ac3H11_450 0.71 -0.7
140,310 + Ac3H11_450 0.71 -0.8
140,310 + Ac3H11_450 0.71 -0.6
140,310 + Ac3H11_450 0.71 +0.4
140,310 + Ac3H11_450 0.71 -0.0
140,311 - Ac3H11_450 0.71 -0.5
140,311 - Ac3H11_450 0.71 -1.0
140,311 - Ac3H11_450 0.71 +0.2
140,311 - Ac3H11_450 0.71 +0.2
140,311 - Ac3H11_450 0.71 -0.5
140,374 + Ac3H11_450 0.78 +1.3
140,375 - Ac3H11_450 0.79 +0.0
140,375 - Ac3H11_450 0.79 +0.2
140,424 + Ac3H11_450 0.84 +0.4
140,425 - Ac3H11_450 0.84 +0.7
140,425 - Ac3H11_450 0.84 -0.6
140,708 + Ac3H11_451 0.14 -1.0
140,924 + Ac3H11_451 0.34 -0.0
141,082 + Ac3H11_451 0.48 +0.0
141,083 - Ac3H11_451 0.48 +1.4
141,122 + Ac3H11_451 0.52 -0.7
141,122 + Ac3H11_451 0.52 -0.5
141,122 + Ac3H11_451 0.52 -0.9
141,122 + Ac3H11_451 0.52 +0.9
141,122 + Ac3H11_451 0.52 +0.5
141,122 + Ac3H11_451 0.52 +0.4
141,122 + Ac3H11_451 0.52 +0.4
141,122 + Ac3H11_451 0.52 -0.6
141,122 + Ac3H11_451 0.52 +0.0
141,123 - Ac3H11_451 0.52 -0.3
141,123 - Ac3H11_451 0.52 +0.5
141,123 - Ac3H11_451 0.52 -0.4
141,123 - Ac3H11_451 0.52 -0.0
141,123 - Ac3H11_451 0.52 -0.2
141,123 - Ac3H11_451 0.52 +1.7
141,123 - Ac3H11_451 0.52 +0.9
141,123 - Ac3H11_451 0.52 +1.2
141,123 - Ac3H11_451 0.52 +1.5
141,123 - Ac3H11_451 0.52 +0.9
141,123 - Ac3H11_451 0.52 +0.4
141,123 - Ac3H11_451 0.52 +0.9
141,236 + Ac3H11_451 0.62 -0.3
141,237 - Ac3H11_451 0.62 +0.3
141,290 + Ac3H11_451 0.67 +0.9

Or see this region's nucleotide sequence