Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4208 and Ac3H11_4209 are separated by 272 nucleotides Ac3H11_4209 and Ac3H11_4210 are separated by 392 nucleotides
Ac3H11_4208 - Putative type II restriction enzyme NmeDIP (EC 3.1.21.4) (Endonuclease NmeDIP) (R.NmeDIP), at 477,260 to 478,243
_4208
Ac3H11_4209 - Heavy metal sensor histidine kinase, at 478,516 to 479,532
_4209
Ac3H11_4210 - DNA-binding heavy metal response regulator, at 479,925 to 480,605
_4210
Position (kb) 478
479
480 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 477.883 kb on - strand, within Ac3H11_4208 at 477.993 kb on + strand, within Ac3H11_4208 at 477.994 kb on - strand, within Ac3H11_4208 at 477.994 kb on - strand, within Ac3H11_4208 at 477.994 kb on - strand, within Ac3H11_4208 at 477.994 kb on - strand, within Ac3H11_4208 at 477.994 kb on - strand, within Ac3H11_4208 at 478.081 kb on + strand, within Ac3H11_4208 at 478.082 kb on - strand, within Ac3H11_4208 at 478.082 kb on - strand, within Ac3H11_4208 at 478.082 kb on - strand, within Ac3H11_4208 at 478.095 kb on + strand, within Ac3H11_4208 at 478.095 kb on + strand, within Ac3H11_4208 at 478.095 kb on + strand, within Ac3H11_4208 at 478.096 kb on - strand, within Ac3H11_4208 at 478.096 kb on - strand, within Ac3H11_4208 at 478.096 kb on - strand, within Ac3H11_4208 at 478.145 kb on + strand at 478.145 kb on + strand at 478.146 kb on - strand at 478.147 kb on + strand at 478.147 kb on + strand at 478.148 kb on - strand at 478.148 kb on - strand at 478.148 kb on - strand at 478.148 kb on - strand at 478.243 kb on + strand at 478.243 kb on + strand at 478.243 kb on + strand at 478.244 kb on - strand at 478.244 kb on - strand at 478.244 kb on - strand at 478.244 kb on - strand at 478.244 kb on - strand at 478.247 kb on + strand at 478.248 kb on - strand at 478.275 kb on + strand at 478.276 kb on - strand at 478.302 kb on + strand at 478.303 kb on - strand at 478.303 kb on - strand at 478.303 kb on - strand at 478.329 kb on + strand at 478.329 kb on + strand at 478.329 kb on + strand at 478.330 kb on - strand at 478.330 kb on - strand at 478.330 kb on - strand at 478.330 kb on - strand at 478.330 kb on - strand at 478.385 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.465 kb on + strand at 478.466 kb on - strand at 478.466 kb on - strand at 478.466 kb on - strand at 478.466 kb on - strand at 478.469 kb on + strand at 478.469 kb on + strand at 478.470 kb on - strand at 478.543 kb on + strand at 478.543 kb on + strand at 478.565 kb on + strand at 478.565 kb on + strand at 478.566 kb on - strand at 478.566 kb on - strand at 478.566 kb on - strand at 478.642 kb on - strand, within Ac3H11_4209 at 478.829 kb on + strand, within Ac3H11_4209 at 478.830 kb on - strand, within Ac3H11_4209 at 478.830 kb on - strand, within Ac3H11_4209 at 478.949 kb on + strand, within Ac3H11_4209 at 478.949 kb on + strand, within Ac3H11_4209 at 478.949 kb on + strand, within Ac3H11_4209 at 478.949 kb on + strand, within Ac3H11_4209 at 478.949 kb on + strand, within Ac3H11_4209 at 478.949 kb on + strand, within Ac3H11_4209 at 478.950 kb on - strand, within Ac3H11_4209 at 478.950 kb on - strand, within Ac3H11_4209 at 478.950 kb on - strand, within Ac3H11_4209 at 478.950 kb on - strand, within Ac3H11_4209 at 478.950 kb on - strand, within Ac3H11_4209 at 479.072 kb on + strand, within Ac3H11_4209 at 479.072 kb on + strand, within Ac3H11_4209 at 479.115 kb on + strand, within Ac3H11_4209 at 479.115 kb on + strand, within Ac3H11_4209 at 479.355 kb on + strand, within Ac3H11_4209 at 479.355 kb on + strand, within Ac3H11_4209 at 479.355 kb on + strand, within Ac3H11_4209 at 479.356 kb on - strand, within Ac3H11_4209 at 479.356 kb on - strand, within Ac3H11_4209 at 479.356 kb on - strand, within Ac3H11_4209 at 479.356 kb on - strand, within Ac3H11_4209 at 479.426 kb on + strand, within Ac3H11_4209 at 479.426 kb on + strand, within Ac3H11_4209 at 479.426 kb on + strand, within Ac3H11_4209 at 479.426 kb on + strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.427 kb on - strand, within Ac3H11_4209 at 479.453 kb on + strand at 479.453 kb on + strand at 479.454 kb on - strand at 479.454 kb on - strand at 479.454 kb on - strand at 479.489 kb on - strand at 479.553 kb on - strand at 479.648 kb on + strand at 479.648 kb on + strand at 479.648 kb on + strand at 479.648 kb on + strand at 479.807 kb on - strand at 479.807 kb on - strand at 479.926 kb on + strand at 479.926 kb on + strand at 479.926 kb on + strand at 479.926 kb on + strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.927 kb on - strand at 479.950 kb on + strand at 479.950 kb on + strand at 479.951 kb on - strand at 479.951 kb on - strand at 479.951 kb on - strand at 479.990 kb on - strand at 480.070 kb on - strand, within Ac3H11_4210 at 480.070 kb on - strand, within Ac3H11_4210 at 480.313 kb on + strand, within Ac3H11_4210 at 480.313 kb on + strand, within Ac3H11_4210 at 480.313 kb on + strand, within Ac3H11_4210 at 480.313 kb on + strand, within Ac3H11_4210 at 480.313 kb on + strand, within Ac3H11_4210 at 480.314 kb on - strand, within Ac3H11_4210
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 477,883 - Ac3H11_4208 0.63 +0.1 477,993 + Ac3H11_4208 0.74 -0.0 477,994 - Ac3H11_4208 0.75 +1.1 477,994 - Ac3H11_4208 0.75 -0.9 477,994 - Ac3H11_4208 0.75 -0.1 477,994 - Ac3H11_4208 0.75 -0.0 477,994 - Ac3H11_4208 0.75 +0.7 478,081 + Ac3H11_4208 0.83 +1.3 478,082 - Ac3H11_4208 0.84 -1.2 478,082 - Ac3H11_4208 0.84 -1.4 478,082 - Ac3H11_4208 0.84 +0.0 478,095 + Ac3H11_4208 0.85 +1.2 478,095 + Ac3H11_4208 0.85 +0.6 478,095 + Ac3H11_4208 0.85 -0.1 478,096 - Ac3H11_4208 0.85 -0.1 478,096 - Ac3H11_4208 0.85 -0.2 478,096 - Ac3H11_4208 0.85 -0.4 478,145 + -0.2 478,145 + -0.5 478,146 - +0.1 478,147 + +1.3 478,147 + +0.4 478,148 - +0.8 478,148 - +0.2 478,148 - +0.5 478,148 - -0.5 478,243 + -0.5 478,243 + +0.2 478,243 + +0.4 478,244 - +0.2 478,244 - -0.0 478,244 - -2.9 478,244 - -0.8 478,244 - +0.4 478,247 + +1.4 478,248 - +0.8 478,275 + +0.4 478,276 - -0.1 478,302 + +1.0 478,303 - +0.2 478,303 - -1.1 478,303 - +0.2 478,329 + +0.2 478,329 + -0.5 478,329 + +1.1 478,330 - -0.1 478,330 - -0.1 478,330 - +0.1 478,330 - -0.2 478,330 - -0.5 478,385 + -0.8 478,465 + +2.3 478,465 + +0.9 478,465 + +0.5 478,465 + +0.1 478,465 + -0.2 478,465 + -1.0 478,465 + +0.6 478,465 + -1.5 478,465 + +0.7 478,466 - -0.3 478,466 - +0.6 478,466 - +0.3 478,466 - +0.4 478,469 + +0.3 478,469 + -1.0 478,470 - +0.2 478,543 + +1.0 478,543 + +1.1 478,565 + -1.1 478,565 + +0.2 478,566 - +0.2 478,566 - -0.5 478,566 - -0.4 478,642 - Ac3H11_4209 0.12 -0.2 478,829 + Ac3H11_4209 0.31 +0.5 478,830 - Ac3H11_4209 0.31 -1.7 478,830 - Ac3H11_4209 0.31 -0.2 478,949 + Ac3H11_4209 0.43 +0.2 478,949 + Ac3H11_4209 0.43 -0.1 478,949 + Ac3H11_4209 0.43 -0.2 478,949 + Ac3H11_4209 0.43 -0.2 478,949 + Ac3H11_4209 0.43 +0.0 478,949 + Ac3H11_4209 0.43 -0.0 478,950 - Ac3H11_4209 0.43 -0.7 478,950 - Ac3H11_4209 0.43 +0.3 478,950 - Ac3H11_4209 0.43 +0.2 478,950 - Ac3H11_4209 0.43 -0.7 478,950 - Ac3H11_4209 0.43 +0.2 479,072 + Ac3H11_4209 0.55 +0.4 479,072 + Ac3H11_4209 0.55 -0.1 479,115 + Ac3H11_4209 0.59 +0.5 479,115 + Ac3H11_4209 0.59 -0.4 479,355 + Ac3H11_4209 0.82 -0.1 479,355 + Ac3H11_4209 0.82 +0.5 479,355 + Ac3H11_4209 0.82 -0.2 479,356 - Ac3H11_4209 0.83 +0.5 479,356 - Ac3H11_4209 0.83 +0.4 479,356 - Ac3H11_4209 0.83 -0.4 479,356 - Ac3H11_4209 0.83 -2.0 479,426 + Ac3H11_4209 0.89 +1.2 479,426 + Ac3H11_4209 0.89 +0.6 479,426 + Ac3H11_4209 0.89 -0.6 479,426 + Ac3H11_4209 0.89 -0.7 479,427 - Ac3H11_4209 0.90 +0.4 479,427 - Ac3H11_4209 0.90 +0.3 479,427 - Ac3H11_4209 0.90 +0.4 479,427 - Ac3H11_4209 0.90 +0.2 479,427 - Ac3H11_4209 0.90 +0.8 479,427 - Ac3H11_4209 0.90 -0.1 479,427 - Ac3H11_4209 0.90 -0.2 479,427 - Ac3H11_4209 0.90 -0.1 479,453 + -0.5 479,453 + +0.6 479,454 - -0.2 479,454 - -0.4 479,454 - -0.6 479,489 - +0.2 479,553 - +0.7 479,648 + -0.3 479,648 + -3.9 479,648 + -0.2 479,648 + +0.5 479,807 - +0.1 479,807 - +0.4 479,926 + -0.9 479,926 + +0.6 479,926 + -0.3 479,926 + +0.0 479,927 - -0.5 479,927 - +0.1 479,927 - -0.9 479,927 - -0.4 479,927 - -0.5 479,927 - +0.8 479,927 - -0.7 479,927 - -0.1 479,927 - +0.9 479,950 + -1.9 479,950 + -0.3 479,951 - -1.1 479,951 - +0.2 479,951 - -0.7 479,990 - +1.7 480,070 - Ac3H11_4210 0.21 -2.0 480,070 - Ac3H11_4210 0.21 +0.6 480,313 + Ac3H11_4210 0.57 -2.6 480,313 + Ac3H11_4210 0.57 -1.1 480,313 + Ac3H11_4210 0.57 -1.0 480,313 + Ac3H11_4210 0.57 -0.7 480,313 + Ac3H11_4210 0.57 -0.8 480,314 - Ac3H11_4210 0.57 +0.0
Or see this region's nucleotide sequence