Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3215 and Ac3H11_3216 are separated by 16 nucleotides Ac3H11_3216 and Ac3H11_3217 are separated by 405 nucleotides
Ac3H11_3215 - TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA, at 120,237 to 121,277
_3215
Ac3H11_3216 - Flagellar hook-length control protein FliK, at 121,294 to 125,079
_3216
Ac3H11_3217 - Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1), at 125,485 to 126,645
_3217
Position (kb) 121
122
123
124
125
126 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 122.267 kb on + strand, within Ac3H11_3216 at 122.268 kb on - strand, within Ac3H11_3216 at 122.268 kb on - strand, within Ac3H11_3216 at 122.268 kb on - strand, within Ac3H11_3216 at 122.321 kb on + strand, within Ac3H11_3216 at 122.322 kb on - strand, within Ac3H11_3216 at 122.322 kb on - strand, within Ac3H11_3216 at 122.322 kb on - strand, within Ac3H11_3216 at 122.570 kb on + strand, within Ac3H11_3216 at 122.571 kb on - strand, within Ac3H11_3216 at 122.740 kb on - strand, within Ac3H11_3216 at 122.776 kb on + strand, within Ac3H11_3216 at 122.776 kb on + strand, within Ac3H11_3216 at 122.777 kb on - strand, within Ac3H11_3216 at 122.777 kb on - strand, within Ac3H11_3216 at 122.777 kb on - strand, within Ac3H11_3216 at 122.874 kb on - strand, within Ac3H11_3216 at 122.874 kb on - strand, within Ac3H11_3216 at 123.176 kb on + strand, within Ac3H11_3216 at 123.176 kb on + strand, within Ac3H11_3216 at 123.408 kb on + strand, within Ac3H11_3216 at 123.479 kb on + strand, within Ac3H11_3216 at 123.479 kb on + strand, within Ac3H11_3216 at 123.480 kb on - strand, within Ac3H11_3216 at 123.480 kb on - strand, within Ac3H11_3216 at 123.782 kb on + strand, within Ac3H11_3216 at 123.782 kb on + strand, within Ac3H11_3216 at 123.782 kb on + strand, within Ac3H11_3216 at 123.782 kb on + strand, within Ac3H11_3216 at 123.782 kb on + strand, within Ac3H11_3216 at 123.783 kb on - strand, within Ac3H11_3216 at 123.783 kb on - strand, within Ac3H11_3216 at 123.783 kb on - strand, within Ac3H11_3216 at 123.805 kb on + strand, within Ac3H11_3216 at 123.805 kb on + strand, within Ac3H11_3216 at 123.805 kb on + strand, within Ac3H11_3216 at 123.806 kb on - strand, within Ac3H11_3216 at 123.892 kb on - strand, within Ac3H11_3216 at 123.892 kb on - strand, within Ac3H11_3216 at 123.926 kb on + strand, within Ac3H11_3216 at 124.194 kb on + strand, within Ac3H11_3216 at 124.194 kb on + strand, within Ac3H11_3216 at 124.195 kb on - strand, within Ac3H11_3216 at 124.195 kb on - strand, within Ac3H11_3216 at 124.195 kb on - strand, within Ac3H11_3216 at 124.195 kb on - strand, within Ac3H11_3216 at 124.195 kb on - strand, within Ac3H11_3216 at 124.298 kb on + strand, within Ac3H11_3216 at 124.298 kb on + strand, within Ac3H11_3216 at 124.419 kb on + strand, within Ac3H11_3216 at 124.433 kb on + strand, within Ac3H11_3216 at 124.433 kb on + strand, within Ac3H11_3216 at 124.433 kb on + strand, within Ac3H11_3216 at 124.433 kb on + strand, within Ac3H11_3216 at 124.433 kb on + strand, within Ac3H11_3216 at 124.433 kb on + strand, within Ac3H11_3216 at 124.434 kb on - strand, within Ac3H11_3216 at 124.434 kb on - strand, within Ac3H11_3216 at 124.434 kb on - strand, within Ac3H11_3216 at 124.550 kb on + strand, within Ac3H11_3216 at 124.550 kb on + strand, within Ac3H11_3216 at 124.551 kb on - strand, within Ac3H11_3216 at 124.551 kb on - strand, within Ac3H11_3216 at 124.570 kb on - strand, within Ac3H11_3216 at 124.705 kb on + strand at 124.706 kb on - strand at 124.706 kb on - strand at 124.706 kb on - strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.788 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.791 kb on - strand at 124.791 kb on - strand at 124.791 kb on - strand at 124.846 kb on - strand at 124.846 kb on - strand at 124.846 kb on - strand at 124.846 kb on - strand at 124.987 kb on + strand at 124.987 kb on + strand at 124.987 kb on + strand at 124.987 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 125.091 kb on - strand at 125.096 kb on + strand at 125.121 kb on + strand at 125.121 kb on + strand at 125.122 kb on - strand at 125.122 kb on - strand at 125.142 kb on + strand at 125.143 kb on - strand at 125.173 kb on + strand at 125.174 kb on - strand at 125.174 kb on - strand at 125.174 kb on - strand at 125.302 kb on + strand at 125.302 kb on + strand at 125.369 kb on - strand at 125.373 kb on - strand at 125.373 kb on - strand at 125.415 kb on + strand at 125.448 kb on + strand at 125.449 kb on - strand at 125.449 kb on - strand at 125.486 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.538 kb on - strand at 125.556 kb on - strand at 125.556 kb on - strand at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.700 kb on - strand, within Ac3H11_3217 at 125.700 kb on - strand, within Ac3H11_3217 at 125.700 kb on - strand, within Ac3H11_3217 at 125.705 kb on + strand, within Ac3H11_3217 at 125.705 kb on + strand, within Ac3H11_3217 at 125.706 kb on - strand, within Ac3H11_3217 at 125.748 kb on - strand, within Ac3H11_3217 at 125.748 kb on - strand, within Ac3H11_3217 at 125.748 kb on - strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 122,267 + Ac3H11_3216 0.26 -0.2 122,268 - Ac3H11_3216 0.26 -1.8 122,268 - Ac3H11_3216 0.26 -0.9 122,268 - Ac3H11_3216 0.26 -0.2 122,321 + Ac3H11_3216 0.27 +0.1 122,322 - Ac3H11_3216 0.27 -0.5 122,322 - Ac3H11_3216 0.27 +0.1 122,322 - Ac3H11_3216 0.27 -0.2 122,570 + Ac3H11_3216 0.34 +0.2 122,571 - Ac3H11_3216 0.34 -1.2 122,740 - Ac3H11_3216 0.38 +0.9 122,776 + Ac3H11_3216 0.39 +0.2 122,776 + Ac3H11_3216 0.39 +0.5 122,777 - Ac3H11_3216 0.39 -0.0 122,777 - Ac3H11_3216 0.39 -0.3 122,777 - Ac3H11_3216 0.39 -2.9 122,874 - Ac3H11_3216 0.42 -2.2 122,874 - Ac3H11_3216 0.42 -0.4 123,176 + Ac3H11_3216 0.50 -0.1 123,176 + Ac3H11_3216 0.50 +0.2 123,408 + Ac3H11_3216 0.56 -0.1 123,479 + Ac3H11_3216 0.58 -0.3 123,479 + Ac3H11_3216 0.58 -1.1 123,480 - Ac3H11_3216 0.58 +0.1 123,480 - Ac3H11_3216 0.58 -0.1 123,782 + Ac3H11_3216 0.66 -0.9 123,782 + Ac3H11_3216 0.66 -1.4 123,782 + Ac3H11_3216 0.66 +0.6 123,782 + Ac3H11_3216 0.66 +0.5 123,782 + Ac3H11_3216 0.66 -0.1 123,783 - Ac3H11_3216 0.66 +0.4 123,783 - Ac3H11_3216 0.66 -0.0 123,783 - Ac3H11_3216 0.66 -3.1 123,805 + Ac3H11_3216 0.66 -0.5 123,805 + Ac3H11_3216 0.66 -1.1 123,805 + Ac3H11_3216 0.66 -1.1 123,806 - Ac3H11_3216 0.66 +0.2 123,892 - Ac3H11_3216 0.69 +1.1 123,892 - Ac3H11_3216 0.69 -0.1 123,926 + Ac3H11_3216 0.70 +1.1 124,194 + Ac3H11_3216 0.77 -2.7 124,194 + Ac3H11_3216 0.77 +0.1 124,195 - Ac3H11_3216 0.77 +0.2 124,195 - Ac3H11_3216 0.77 -0.1 124,195 - Ac3H11_3216 0.77 +0.3 124,195 - Ac3H11_3216 0.77 +2.4 124,195 - Ac3H11_3216 0.77 +0.3 124,298 + Ac3H11_3216 0.79 +2.1 124,298 + Ac3H11_3216 0.79 -0.5 124,419 + Ac3H11_3216 0.83 -1.0 124,433 + Ac3H11_3216 0.83 +0.1 124,433 + Ac3H11_3216 0.83 +0.1 124,433 + Ac3H11_3216 0.83 -1.3 124,433 + Ac3H11_3216 0.83 -1.4 124,433 + Ac3H11_3216 0.83 -1.3 124,433 + Ac3H11_3216 0.83 -0.3 124,434 - Ac3H11_3216 0.83 +1.1 124,434 - Ac3H11_3216 0.83 +0.3 124,434 - Ac3H11_3216 0.83 -0.2 124,550 + Ac3H11_3216 0.86 +0.4 124,550 + Ac3H11_3216 0.86 -0.3 124,551 - Ac3H11_3216 0.86 +1.1 124,551 - Ac3H11_3216 0.86 -0.1 124,570 - Ac3H11_3216 0.87 -0.0 124,705 + -0.9 124,706 - +0.3 124,706 - +0.4 124,706 - -1.6 124,709 + -1.1 124,709 + +0.1 124,709 + -0.9 124,709 + -1.2 124,709 + +0.3 124,709 + -0.4 124,709 + +0.2 124,709 + +0.5 124,709 + +0.3 124,709 + +0.2 124,709 + +0.5 124,709 + -0.7 124,709 + +0.3 124,709 + +0.7 124,709 + +0.3 124,709 + -0.3 124,709 + +0.3 124,709 + -0.3 124,709 + +0.1 124,709 + -0.4 124,709 + +0.2 124,710 - -0.5 124,710 - +0.2 124,710 - +1.1 124,710 - -0.7 124,710 - -1.2 124,710 - -0.3 124,710 - -0.5 124,710 - +0.4 124,710 - -0.2 124,710 - +0.4 124,710 - +0.2 124,710 - -1.0 124,710 - +0.4 124,710 - +0.0 124,710 - +0.9 124,710 - +0.5 124,710 - -1.4 124,788 + -1.3 124,790 + +0.7 124,790 + +1.2 124,790 + -0.6 124,790 + -1.9 124,790 + -0.6 124,790 + -0.1 124,791 - +0.2 124,791 - -1.2 124,791 - -0.2 124,846 - +0.1 124,846 - +0.7 124,846 - -0.2 124,846 - -0.0 124,987 + +1.2 124,987 + +0.4 124,987 + +1.1 124,987 + +0.6 124,991 + -0.1 124,991 + -1.2 124,991 + -0.1 124,991 + +2.5 124,991 + +0.5 124,991 + -0.7 124,991 + +0.6 125,091 - -0.6 125,096 + +0.2 125,121 + +0.2 125,121 + -0.1 125,122 - -1.3 125,122 - +0.7 125,142 + -0.7 125,143 - +0.6 125,173 + +0.9 125,174 - +1.5 125,174 - -1.2 125,174 - +0.7 125,302 + -1.2 125,302 + -0.4 125,369 - +0.1 125,373 - -1.0 125,373 - -1.3 125,415 + +0.9 125,448 + -0.3 125,449 - +1.2 125,449 - -0.3 125,486 + -0.7 125,537 + +1.6 125,537 + -0.1 125,537 + -0.1 125,537 + +0.6 125,537 + +0.2 125,537 + -1.0 125,537 + +0.2 125,537 + -1.2 125,537 + +0.3 125,537 + -0.6 125,538 - -0.3 125,556 - -0.8 125,556 - +1.1 125,687 + Ac3H11_3217 0.17 -0.3 125,687 + Ac3H11_3217 0.17 -0.8 125,687 + Ac3H11_3217 0.17 -0.5 125,687 + Ac3H11_3217 0.17 +0.2 125,687 + Ac3H11_3217 0.17 +0.2 125,687 + Ac3H11_3217 0.17 -2.1 125,687 + Ac3H11_3217 0.17 +0.7 125,688 - Ac3H11_3217 0.17 -2.2 125,688 - Ac3H11_3217 0.17 +0.1 125,688 - Ac3H11_3217 0.17 -0.2 125,688 - Ac3H11_3217 0.17 -1.1 125,688 - Ac3H11_3217 0.17 +0.2 125,688 - Ac3H11_3217 0.17 -0.4 125,699 + Ac3H11_3217 0.18 -0.4 125,699 + Ac3H11_3217 0.18 +0.4 125,699 + Ac3H11_3217 0.18 +0.6 125,699 + Ac3H11_3217 0.18 +0.1 125,700 - Ac3H11_3217 0.19 -1.2 125,700 - Ac3H11_3217 0.19 +0.7 125,700 - Ac3H11_3217 0.19 +1.0 125,705 + Ac3H11_3217 0.19 -0.3 125,705 + Ac3H11_3217 0.19 +0.2 125,706 - Ac3H11_3217 0.19 -1.2 125,748 - Ac3H11_3217 0.23 +0.5 125,748 - Ac3H11_3217 0.23 +1.2 125,748 - Ac3H11_3217 0.23 +0.4 125,810 + Ac3H11_3217 0.28 -0.4 125,810 + Ac3H11_3217 0.28 +0.4 125,810 + Ac3H11_3217 0.28 +0.7 125,810 + Ac3H11_3217 0.28 -0.0 125,810 + Ac3H11_3217 0.28 +0.1 125,810 + Ac3H11_3217 0.28 -0.2 125,810 + Ac3H11_3217 0.28 +0.0 125,810 + Ac3H11_3217 0.28 +0.3 125,810 + Ac3H11_3217 0.28 +0.2 125,810 + Ac3H11_3217 0.28 +0.0 125,810 + Ac3H11_3217 0.28 -0.5 125,810 + Ac3H11_3217 0.28 -0.3 125,811 - Ac3H11_3217 0.28 +0.4 125,811 - Ac3H11_3217 0.28 -1.0 125,811 - Ac3H11_3217 0.28 +1.1 125,811 - Ac3H11_3217 0.28 -1.1 125,811 - Ac3H11_3217 0.28 +1.5 125,811 - Ac3H11_3217 0.28 +1.6 125,811 - Ac3H11_3217 0.28 -0.5 125,811 - Ac3H11_3217 0.28 -0.4 125,811 - Ac3H11_3217 0.28 +0.6 125,811 - Ac3H11_3217 0.28 +0.5 125,811 - Ac3H11_3217 0.28 +0.5
Or see this region's nucleotide sequence