Experiment: copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1141 and Ac3H11_1142 are separated by 418 nucleotides Ac3H11_1142 and Ac3H11_1143 overlap by 4 nucleotides
Ac3H11_1141 - hypothetical protein, at 88,730 to 91,429
_1141
Ac3H11_1142 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 91,848 to 92,099
_1142
Ac3H11_1143 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 92,096 to 94,609
_1143
Position (kb) 91
92
93 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 90.938 kb on - strand, within Ac3H11_1141 at 91.187 kb on + strand at 91.187 kb on + strand at 91.187 kb on + strand at 91.274 kb on + strand at 91.274 kb on + strand at 91.274 kb on + strand at 91.274 kb on + strand at 91.275 kb on - strand at 91.275 kb on - strand at 91.275 kb on - strand at 91.275 kb on - strand at 91.275 kb on - strand at 91.275 kb on - strand at 91.275 kb on - strand at 91.275 kb on - strand at 91.275 kb on - strand at 91.275 kb on - strand at 91.275 kb on - strand at 91.275 kb on - strand at 91.407 kb on - strand at 91.407 kb on - strand at 91.407 kb on - strand at 91.420 kb on - strand at 91.420 kb on - strand at 91.420 kb on - strand at 91.995 kb on + strand, within Ac3H11_1142 at 91.995 kb on + strand, within Ac3H11_1142 at 92.390 kb on + strand, within Ac3H11_1143 at 92.390 kb on + strand, within Ac3H11_1143 at 92.390 kb on + strand, within Ac3H11_1143 at 92.390 kb on + strand, within Ac3H11_1143 at 92.390 kb on + strand, within Ac3H11_1143 at 92.390 kb on + strand, within Ac3H11_1143 at 92.391 kb on - strand, within Ac3H11_1143 at 92.391 kb on - strand, within Ac3H11_1143 at 92.391 kb on - strand, within Ac3H11_1143 at 92.391 kb on - strand, within Ac3H11_1143 at 92.391 kb on - strand, within Ac3H11_1143 at 92.391 kb on - strand, within Ac3H11_1143 at 92.391 kb on - strand, within Ac3H11_1143 at 92.391 kb on - strand, within Ac3H11_1143 at 92.621 kb on + strand, within Ac3H11_1143 at 92.621 kb on + strand, within Ac3H11_1143 at 92.621 kb on + strand, within Ac3H11_1143 at 92.622 kb on - strand, within Ac3H11_1143 at 92.622 kb on - strand, within Ac3H11_1143 at 92.736 kb on - strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.765 kb on + strand, within Ac3H11_1143 at 92.766 kb on - strand, within Ac3H11_1143 at 92.766 kb on - strand, within Ac3H11_1143 at 92.766 kb on - strand, within Ac3H11_1143 at 92.766 kb on - strand, within Ac3H11_1143 at 92.766 kb on - strand, within Ac3H11_1143 at 92.766 kb on - strand, within Ac3H11_1143 at 92.766 kb on - strand, within Ac3H11_1143 at 92.766 kb on - strand, within Ac3H11_1143 at 92.804 kb on + strand, within Ac3H11_1143 at 92.805 kb on - strand, within Ac3H11_1143 at 92.900 kb on + strand, within Ac3H11_1143 at 92.900 kb on + strand, within Ac3H11_1143 at 92.900 kb on + strand, within Ac3H11_1143 at 92.900 kb on + strand, within Ac3H11_1143 at 92.900 kb on + strand, within Ac3H11_1143 at 92.900 kb on + strand, within Ac3H11_1143 at 92.900 kb on + strand, within Ac3H11_1143 at 92.900 kb on + strand, within Ac3H11_1143 at 92.900 kb on + strand, within Ac3H11_1143 at 92.900 kb on + strand, within Ac3H11_1143 at 92.900 kb on + strand, within Ac3H11_1143 at 92.900 kb on + strand, within Ac3H11_1143 at 92.901 kb on - strand, within Ac3H11_1143 at 92.901 kb on - strand, within Ac3H11_1143 at 93.007 kb on - strand, within Ac3H11_1143
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 1 mM remove 90,938 - Ac3H11_1141 0.82 -0.4 91,187 + -0.5 91,187 + +1.3 91,187 + -0.5 91,274 + +0.3 91,274 + +0.4 91,274 + +0.2 91,274 + -1.2 91,275 - -0.5 91,275 - +1.5 91,275 - +0.6 91,275 - -0.2 91,275 - -0.6 91,275 - +0.4 91,275 - -3.0 91,275 - +0.3 91,275 - -1.0 91,275 - +0.4 91,275 - -0.9 91,275 - -0.4 91,407 - -0.3 91,407 - +1.0 91,407 - -0.3 91,420 - -0.3 91,420 - -0.5 91,420 - -0.6 91,995 + Ac3H11_1142 0.58 +0.4 91,995 + Ac3H11_1142 0.58 +0.5 92,390 + Ac3H11_1143 0.12 -0.1 92,390 + Ac3H11_1143 0.12 +0.4 92,390 + Ac3H11_1143 0.12 -0.9 92,390 + Ac3H11_1143 0.12 -1.1 92,390 + Ac3H11_1143 0.12 -1.3 92,390 + Ac3H11_1143 0.12 +0.5 92,391 - Ac3H11_1143 0.12 +0.9 92,391 - Ac3H11_1143 0.12 +0.2 92,391 - Ac3H11_1143 0.12 -1.0 92,391 - Ac3H11_1143 0.12 -0.1 92,391 - Ac3H11_1143 0.12 +0.6 92,391 - Ac3H11_1143 0.12 +0.6 92,391 - Ac3H11_1143 0.12 +0.8 92,391 - Ac3H11_1143 0.12 +0.5 92,621 + Ac3H11_1143 0.21 -0.2 92,621 + Ac3H11_1143 0.21 -1.3 92,621 + Ac3H11_1143 0.21 -0.2 92,622 - Ac3H11_1143 0.21 -0.4 92,622 - Ac3H11_1143 0.21 -1.4 92,736 - Ac3H11_1143 0.25 -0.3 92,765 + Ac3H11_1143 0.27 -2.1 92,765 + Ac3H11_1143 0.27 +0.9 92,765 + Ac3H11_1143 0.27 +0.3 92,765 + Ac3H11_1143 0.27 +0.1 92,765 + Ac3H11_1143 0.27 -0.3 92,765 + Ac3H11_1143 0.27 +0.4 92,765 + Ac3H11_1143 0.27 +0.4 92,765 + Ac3H11_1143 0.27 -0.2 92,765 + Ac3H11_1143 0.27 -0.3 92,765 + Ac3H11_1143 0.27 +0.8 92,765 + Ac3H11_1143 0.27 +0.4 92,765 + Ac3H11_1143 0.27 -0.8 92,765 + Ac3H11_1143 0.27 +0.9 92,765 + Ac3H11_1143 0.27 -0.5 92,766 - Ac3H11_1143 0.27 -0.6 92,766 - Ac3H11_1143 0.27 -0.8 92,766 - Ac3H11_1143 0.27 +0.3 92,766 - Ac3H11_1143 0.27 +0.2 92,766 - Ac3H11_1143 0.27 +0.8 92,766 - Ac3H11_1143 0.27 -1.0 92,766 - Ac3H11_1143 0.27 +0.1 92,766 - Ac3H11_1143 0.27 +0.2 92,804 + Ac3H11_1143 0.28 +1.1 92,805 - Ac3H11_1143 0.28 +0.6 92,900 + Ac3H11_1143 0.32 -0.6 92,900 + Ac3H11_1143 0.32 +0.5 92,900 + Ac3H11_1143 0.32 -0.1 92,900 + Ac3H11_1143 0.32 -0.6 92,900 + Ac3H11_1143 0.32 -1.9 92,900 + Ac3H11_1143 0.32 +0.7 92,900 + Ac3H11_1143 0.32 +0.1 92,900 + Ac3H11_1143 0.32 +1.5 92,900 + Ac3H11_1143 0.32 +0.4 92,900 + Ac3H11_1143 0.32 +0.2 92,900 + Ac3H11_1143 0.32 +0.5 92,900 + Ac3H11_1143 0.32 -0.8 92,901 - Ac3H11_1143 0.32 +1.6 92,901 - Ac3H11_1143 0.32 -2.3 93,007 - Ac3H11_1143 0.36 -0.9
Or see this region's nucleotide sequence