Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07065 and AZOBR_RS07070 are separated by 259 nucleotides AZOBR_RS07070 and AZOBR_RS07075 are separated by 4 nucleotides AZOBR_RS07075 and AZOBR_RS07080 are separated by 9 nucleotides AZOBR_RS07080 and AZOBR_RS07085 are separated by 42 nucleotides
AZOBR_RS07065: AZOBR_RS07065 - membrane protein, at 1,494,605 to 1,495,330
_RS07065
AZOBR_RS07070: AZOBR_RS07070 - hypothetical protein, at 1,495,590 to 1,495,838
_RS07070
AZOBR_RS07075: AZOBR_RS07075 - putative N-acetyltransferase, at 1,495,843 to 1,496,259
_RS07075
AZOBR_RS07080: AZOBR_RS07080 - isomerase, at 1,496,269 to 1,497,063
_RS07080
AZOBR_RS07085: AZOBR_RS07085 - acyl dehydratase, at 1,497,106 to 1,497,561
_RS07085
Position (kb)
1495
1496
1497 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1495.023 kb on - strand, within AZOBR_RS07065 at 1495.023 kb on - strand, within AZOBR_RS07065 at 1495.182 kb on - strand, within AZOBR_RS07065 at 1495.209 kb on - strand, within AZOBR_RS07065 at 1495.209 kb on - strand, within AZOBR_RS07065 at 1495.272 kb on - strand at 1495.439 kb on - strand at 1495.534 kb on + strand at 1496.065 kb on + strand, within AZOBR_RS07075 at 1496.065 kb on + strand, within AZOBR_RS07075 at 1496.066 kb on - strand, within AZOBR_RS07075 at 1496.066 kb on - strand, within AZOBR_RS07075 at 1496.200 kb on + strand, within AZOBR_RS07075 at 1496.200 kb on + strand, within AZOBR_RS07075 at 1496.258 kb on - strand at 1496.437 kb on + strand, within AZOBR_RS07080 at 1496.437 kb on + strand, within AZOBR_RS07080 at 1496.437 kb on + strand, within AZOBR_RS07080 at 1496.602 kb on + strand, within AZOBR_RS07080 at 1496.603 kb on - strand, within AZOBR_RS07080 at 1496.917 kb on + strand, within AZOBR_RS07080 at 1497.037 kb on + strand at 1497.038 kb on - strand at 1497.038 kb on - strand at 1497.038 kb on - strand at 1497.040 kb on - strand at 1497.055 kb on + strand at 1497.055 kb on + strand at 1497.056 kb on - strand at 1497.061 kb on + strand at 1497.062 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,495,023 - AZOBR_RS07065 0.58 +1.8 1,495,023 - AZOBR_RS07065 0.58 +1.5 1,495,182 - AZOBR_RS07065 0.79 -0.9 1,495,209 - AZOBR_RS07065 0.83 -2.3 1,495,209 - AZOBR_RS07065 0.83 -0.1 1,495,272 - -0.4 1,495,439 - -0.6 1,495,534 + -0.7 1,496,065 + AZOBR_RS07075 0.53 -0.6 1,496,065 + AZOBR_RS07075 0.53 -0.5 1,496,066 - AZOBR_RS07075 0.53 -0.4 1,496,066 - AZOBR_RS07075 0.53 +0.0 1,496,200 + AZOBR_RS07075 0.86 -0.1 1,496,200 + AZOBR_RS07075 0.86 -0.5 1,496,258 - -0.2 1,496,437 + AZOBR_RS07080 0.21 -0.2 1,496,437 + AZOBR_RS07080 0.21 -0.5 1,496,437 + AZOBR_RS07080 0.21 -0.9 1,496,602 + AZOBR_RS07080 0.42 -0.3 1,496,603 - AZOBR_RS07080 0.42 +0.7 1,496,917 + AZOBR_RS07080 0.82 -0.2 1,497,037 + -0.2 1,497,038 - -0.6 1,497,038 - +0.1 1,497,038 - +0.7 1,497,040 - +0.0 1,497,055 + +1.6 1,497,055 + -1.1 1,497,056 - +0.8 1,497,061 + +0.2 1,497,062 - +0.2
Or see this region's nucleotide sequence