Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS06190

Experiment: LB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS06180 and AZOBR_RS06185 are separated by 243 nucleotidesAZOBR_RS06185 and AZOBR_RS06190 are separated by 57 nucleotidesAZOBR_RS06190 and AZOBR_RS06195 are separated by 156 nucleotides AZOBR_RS06180: AZOBR_RS06180 - flgE (modular protein), at 1,309,382 to 1,310,752 _RS06180 AZOBR_RS06185: AZOBR_RS06185 - carbonic anhydrase, at 1,310,996 to 1,311,688 _RS06185 AZOBR_RS06190: AZOBR_RS06190 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, at 1,311,746 to 1,312,339 _RS06190 AZOBR_RS06195: AZOBR_RS06195 - hypothetical protein, at 1,312,496 to 1,313,113 _RS06195 Position (kb) 1311 1312 1313Strain fitness (log2 ratio) -1 0 1at 1311.733 kb on - strandat 1313.173 kb on - strandat 1313.230 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB
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1,311,733 - -0.1
1,313,173 - +0.9
1,313,230 - +0.7

Or see this region's nucleotide sequence