Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02195 and AZOBR_RS02200 overlap by 13 nucleotides AZOBR_RS02200 and AZOBR_RS02205 are separated by 144 nucleotides AZOBR_RS02205 and AZOBR_RS02210 are separated by 165 nucleotides
AZOBR_RS02195: AZOBR_RS02195 - coproporphyrinogen III oxidase, at 450,526 to 451,692
_RS02195
AZOBR_RS02200: AZOBR_RS02200 - nucleoside-triphosphate diphosphatase, at 451,680 to 452,282
_RS02200
AZOBR_RS02205: AZOBR_RS02205 - ribonuclease PH, at 452,427 to 453,146
_RS02205
AZOBR_RS02210: AZOBR_RS02210 - HrcA family transcriptional regulator, at 453,312 to 454,352
_RS02210
Position (kb) 452
453
454 Strain fitness (log2 ratio) -2
-1
0
1
2 at 451.620 kb on - strand at 451.655 kb on + strand at 451.655 kb on + strand at 451.655 kb on + strand at 451.655 kb on + strand at 451.656 kb on - strand at 451.805 kb on - strand, within AZOBR_RS02200 at 452.008 kb on + strand, within AZOBR_RS02200 at 452.008 kb on + strand at 452.008 kb on + strand, within AZOBR_RS02200 at 452.008 kb on + strand, within AZOBR_RS02200 at 452.008 kb on + strand, within AZOBR_RS02200 at 452.009 kb on - strand, within AZOBR_RS02200 at 452.009 kb on - strand, within AZOBR_RS02200 at 452.428 kb on + strand at 452.428 kb on + strand at 452.428 kb on + strand at 452.429 kb on - strand at 452.429 kb on - strand at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 452.647 kb on + strand, within AZOBR_RS02205 at 453.186 kb on + strand at 453.186 kb on + strand at 453.187 kb on - strand at 453.187 kb on - strand at 453.255 kb on - strand at 453.369 kb on + strand at 453.369 kb on + strand at 453.369 kb on + strand at 453.370 kb on - strand at 453.370 kb on - strand at 453.370 kb on - strand at 453.486 kb on + strand, within AZOBR_RS02210 at 453.486 kb on + strand, within AZOBR_RS02210 at 453.487 kb on - strand, within AZOBR_RS02210
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 451,620 - +0.1 451,655 + +0.1 451,655 + +0.2 451,655 + -0.1 451,655 + -1.8 451,656 - +0.2 451,805 - AZOBR_RS02200 0.21 -2.4 452,008 + AZOBR_RS02200 0.54 -1.5 452,008 + +1.2 452,008 + AZOBR_RS02200 0.54 -1.2 452,008 + AZOBR_RS02200 0.54 -1.7 452,008 + AZOBR_RS02200 0.54 -1.2 452,009 - AZOBR_RS02200 0.55 -0.6 452,009 - AZOBR_RS02200 0.55 -1.1 452,428 + -1.1 452,428 + -0.3 452,428 + +0.6 452,429 - -0.3 452,429 - +0.6 452,647 + AZOBR_RS02205 0.31 -1.6 452,647 + AZOBR_RS02205 0.31 -1.6 452,647 + AZOBR_RS02205 0.31 +0.6 452,647 + AZOBR_RS02205 0.31 -2.6 452,647 + AZOBR_RS02205 0.31 -0.2 452,647 + AZOBR_RS02205 0.31 -1.3 453,186 + -0.5 453,186 + -0.3 453,187 - -0.5 453,187 - -0.4 453,255 - -0.8 453,369 + +0.0 453,369 + +2.0 453,369 + +0.4 453,370 - -0.8 453,370 - -0.1 453,370 - +0.5 453,486 + AZOBR_RS02210 0.17 -0.0 453,486 + AZOBR_RS02210 0.17 -0.8 453,487 - AZOBR_RS02210 0.17 -0.1
Or see this region's nucleotide sequence