Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02646

Experiment: D-Mannose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCCNA_02644 and CCNA_02645 overlap by 4 nucleotidesCCNA_02645 and CCNA_02646 overlap by 4 nucleotidesCCNA_02646 and CCNA_02647 are separated by 840 nucleotides CCNA_02644: CCNA_02644 - cell division protein FtsL, at 2,798,119 to 2,798,562 _02644 CCNA_02645: CCNA_02645 - S-adenosyl-methyltransferase MraW, at 2,798,559 to 2,799,494 _02645 CCNA_02646: CCNA_02646 - cell division protein MraZ, at 2,799,491 to 2,799,961 _02646 CCNA_02647: CCNA_02647 - PBP2-family ligand-binding transcriptional regulator, at 2,800,802 to 2,801,722 _02647 Position (kb) 2799 2800Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 2798.576 kb on + strandat 2798.580 kb on - strandat 2799.358 kb on - strand, within CCNA_02645at 2799.438 kb on - strandat 2799.477 kb on - strandat 2799.534 kb on - strandat 2799.751 kb on - strand, within CCNA_02646at 2799.788 kb on - strand, within CCNA_02646at 2799.809 kb on - strand, within CCNA_02646at 2799.825 kb on + strand, within CCNA_02646at 2799.854 kb on - strand, within CCNA_02646at 2799.922 kb on + strandat 2799.973 kb on - strandat 2799.973 kb on - strandat 2799.974 kb on - strandat 2799.994 kb on - strandat 2800.015 kb on - strandat 2800.214 kb on + strandat 2800.221 kb on + strandat 2800.221 kb on + strandat 2800.229 kb on - strandat 2800.306 kb on + strandat 2800.318 kb on + strandat 2800.325 kb on - strandat 2800.326 kb on - strandat 2800.331 kb on - strandat 2800.753 kb on + strandat 2800.761 kb on - strandat 2800.761 kb on - strandat 2800.761 kb on - strandat 2800.761 kb on - strandat 2800.774 kb on + strandat 2800.795 kb on + strandat 2800.806 kb on - strandat 2800.806 kb on - strandat 2800.818 kb on - strandat 2800.857 kb on + strandat 2800.873 kb on + strandat 2800.881 kb on - strandat 2800.888 kb on + strandat 2800.888 kb on - strandat 2800.888 kb on - strandat 2800.888 kb on - strandat 2800.934 kb on - strand, within CCNA_02647at 2800.934 kb on - strand, within CCNA_02647at 2800.943 kb on + strand, within CCNA_02647at 2800.950 kb on - strand, within CCNA_02647

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Mannose (C)
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2,798,576 + +0.7
2,798,580 - +4.8
2,799,358 - CCNA_02645 0.85 -2.5
2,799,438 - +0.4
2,799,477 - +1.4
2,799,534 - +3.7
2,799,751 - CCNA_02646 0.55 +3.4
2,799,788 - CCNA_02646 0.63 +5.6
2,799,809 - CCNA_02646 0.68 +5.6
2,799,825 + CCNA_02646 0.71 +0.2
2,799,854 - CCNA_02646 0.77 +6.1
2,799,922 + -1.8
2,799,973 - +5.8
2,799,973 - +3.1
2,799,974 - +3.4
2,799,994 - +4.6
2,800,015 - +2.7
2,800,214 + +2.1
2,800,221 + +0.5
2,800,221 + -0.6
2,800,229 - -0.1
2,800,306 + -0.6
2,800,318 + -0.8
2,800,325 - +0.5
2,800,326 - +0.8
2,800,331 - -0.2
2,800,753 + +0.7
2,800,761 - -2.4
2,800,761 - -1.9
2,800,761 - -1.5
2,800,761 - -0.6
2,800,774 + +0.1
2,800,795 + -1.2
2,800,806 - -0.9
2,800,806 - -0.4
2,800,818 - +1.4
2,800,857 + -1.5
2,800,873 + +0.9
2,800,881 - +0.3
2,800,888 + -0.6
2,800,888 - -0.5
2,800,888 - +0.3
2,800,888 - -0.2
2,800,934 - CCNA_02647 0.14 +0.4
2,800,934 - CCNA_02647 0.14 +0.7
2,800,943 + CCNA_02647 0.15 -1.2
2,800,950 - CCNA_02647 0.16 +0.5

Or see this region's nucleotide sequence