Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS28270

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS28270 and AZOBR_RS28280 are separated by 827 nucleotides AZOBR_RS28270: AZOBR_RS28270 - copper chaperone, at 510,552 to 511,151 _RS28270 AZOBR_RS28280: AZOBR_RS28280 - ABC transporter ATP-binding protein, at 511,979 to 512,848 _RS28280 Position (kb) 510 511 512Strain fitness (log2 ratio) -2 -1 0 1at 509.919 kb on - strandat 509.919 kb on - strandat 509.919 kb on - strandat 510.086 kb on + strandat 510.796 kb on + strand, within AZOBR_RS28270at 510.797 kb on - strand, within AZOBR_RS28270at 510.874 kb on + strand, within AZOBR_RS28270at 510.874 kb on + strand, within AZOBR_RS28270at 510.875 kb on - strand, within AZOBR_RS28270at 510.875 kb on - strand, within AZOBR_RS28270at 510.875 kb on - strand, within AZOBR_RS28270at 510.875 kb on - strand, within AZOBR_RS28270at 510.875 kb on - strand, within AZOBR_RS28270at 511.420 kb on + strandat 511.421 kb on - strandat 511.632 kb on + strandat 512.013 kb on + strandat 512.013 kb on + strandat 512.013 kb on + strandat 512.014 kb on - strandat 512.014 kb on - strandat 512.014 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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509,919 - -0.3
509,919 - -0.1
509,919 - -0.4
510,086 + +0.1
510,796 + AZOBR_RS28270 0.41 -1.0
510,797 - AZOBR_RS28270 0.41 -0.2
510,874 + AZOBR_RS28270 0.54 -0.2
510,874 + AZOBR_RS28270 0.54 -2.1
510,875 - AZOBR_RS28270 0.54 -1.6
510,875 - AZOBR_RS28270 0.54 -0.3
510,875 - AZOBR_RS28270 0.54 -1.5
510,875 - AZOBR_RS28270 0.54 +0.3
510,875 - AZOBR_RS28270 0.54 -0.4
511,420 + -0.6
511,421 - -0.0
511,632 + +0.1
512,013 + +0.2
512,013 + -0.6
512,013 + -0.1
512,014 - -0.0
512,014 - +0.3
512,014 - +0.0

Or see this region's nucleotide sequence