Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS10225 and AZOBR_RS10230 are separated by 140 nucleotides AZOBR_RS10230 and AZOBR_RS10235 are separated by 43 nucleotides
AZOBR_RS10225: AZOBR_RS10225 - diaminopimelate decarboxylase, at 2,135,526 to 2,136,800
_RS10225
AZOBR_RS10230: AZOBR_RS10230 - homospermidine synthase, at 2,136,941 to 2,138,359
_RS10230
AZOBR_RS10235: AZOBR_RS10235 - cobalamin biosynthesis protein CobD, at 2,138,403 to 2,139,365
_RS10235
Position (kb)
2136
2137
2138
2139 Strain fitness (log2 ratio)
-2
-1
0
1 at 2135.941 kb on - strand, within AZOBR_RS10225 at 2136.064 kb on - strand, within AZOBR_RS10225 at 2136.064 kb on - strand, within AZOBR_RS10225 at 2136.192 kb on + strand, within AZOBR_RS10225 at 2136.582 kb on + strand, within AZOBR_RS10225 at 2136.582 kb on + strand, within AZOBR_RS10225 at 2136.582 kb on + strand, within AZOBR_RS10225 at 2136.583 kb on - strand, within AZOBR_RS10225 at 2136.583 kb on - strand, within AZOBR_RS10225 at 2136.583 kb on - strand, within AZOBR_RS10225 at 2136.775 kb on - strand at 2136.798 kb on + strand at 2136.798 kb on + strand at 2136.905 kb on + strand at 2136.906 kb on - strand at 2136.938 kb on + strand at 2136.938 kb on + strand at 2136.938 kb on + strand at 2136.938 kb on + strand at 2136.939 kb on - strand at 2136.939 kb on - strand at 2137.152 kb on - strand, within AZOBR_RS10230 at 2137.152 kb on - strand, within AZOBR_RS10230 at 2137.262 kb on + strand, within AZOBR_RS10230 at 2137.262 kb on + strand, within AZOBR_RS10230 at 2137.298 kb on + strand, within AZOBR_RS10230 at 2137.337 kb on + strand, within AZOBR_RS10230 at 2137.337 kb on + strand, within AZOBR_RS10230 at 2137.338 kb on - strand, within AZOBR_RS10230 at 2137.736 kb on + strand, within AZOBR_RS10230 at 2137.736 kb on + strand, within AZOBR_RS10230 at 2137.844 kb on + strand, within AZOBR_RS10230 at 2137.845 kb on - strand, within AZOBR_RS10230 at 2137.847 kb on + strand, within AZOBR_RS10230 at 2137.847 kb on + strand, within AZOBR_RS10230 at 2137.847 kb on + strand, within AZOBR_RS10230 at 2137.877 kb on + strand, within AZOBR_RS10230 at 2137.895 kb on + strand, within AZOBR_RS10230 at 2137.959 kb on - strand, within AZOBR_RS10230 at 2137.959 kb on - strand, within AZOBR_RS10230 at 2138.051 kb on + strand, within AZOBR_RS10230 at 2138.052 kb on - strand, within AZOBR_RS10230 at 2138.102 kb on + strand, within AZOBR_RS10230 at 2138.238 kb on - strand at 2138.833 kb on + strand, within AZOBR_RS10235 at 2138.834 kb on - strand, within AZOBR_RS10235 at 2139.251 kb on + strand, within AZOBR_RS10235 at 2139.292 kb on + strand at 2139.293 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,135,941 - AZOBR_RS10225 0.33 -0.2 2,136,064 - AZOBR_RS10225 0.42 +0.2 2,136,064 - AZOBR_RS10225 0.42 -1.1 2,136,192 + AZOBR_RS10225 0.52 -0.0 2,136,582 + AZOBR_RS10225 0.83 +0.8 2,136,582 + AZOBR_RS10225 0.83 +0.0 2,136,582 + AZOBR_RS10225 0.83 -0.0 2,136,583 - AZOBR_RS10225 0.83 -0.4 2,136,583 - AZOBR_RS10225 0.83 +0.2 2,136,583 - AZOBR_RS10225 0.83 +0.9 2,136,775 - -1.7 2,136,798 + +0.4 2,136,798 + -0.4 2,136,905 + -0.4 2,136,906 - +0.5 2,136,938 + +0.2 2,136,938 + +0.8 2,136,938 + +0.7 2,136,938 + -0.2 2,136,939 - -0.0 2,136,939 - +0.9 2,137,152 - AZOBR_RS10230 0.15 +0.4 2,137,152 - AZOBR_RS10230 0.15 +0.3 2,137,262 + AZOBR_RS10230 0.23 +0.8 2,137,262 + AZOBR_RS10230 0.23 +1.7 2,137,298 + AZOBR_RS10230 0.25 +0.9 2,137,337 + AZOBR_RS10230 0.28 +0.2 2,137,337 + AZOBR_RS10230 0.28 +0.6 2,137,338 - AZOBR_RS10230 0.28 -1.0 2,137,736 + AZOBR_RS10230 0.56 +1.3 2,137,736 + AZOBR_RS10230 0.56 -0.2 2,137,844 + AZOBR_RS10230 0.64 -0.8 2,137,845 - AZOBR_RS10230 0.64 +0.7 2,137,847 + AZOBR_RS10230 0.64 -0.3 2,137,847 + AZOBR_RS10230 0.64 -0.3 2,137,847 + AZOBR_RS10230 0.64 -0.1 2,137,877 + AZOBR_RS10230 0.66 -2.0 2,137,895 + AZOBR_RS10230 0.67 -0.1 2,137,959 - AZOBR_RS10230 0.72 +0.1 2,137,959 - AZOBR_RS10230 0.72 +0.1 2,138,051 + AZOBR_RS10230 0.78 -1.2 2,138,052 - AZOBR_RS10230 0.78 +0.4 2,138,102 + AZOBR_RS10230 0.82 +0.0 2,138,238 - -0.3 2,138,833 + AZOBR_RS10235 0.45 -0.0 2,138,834 - AZOBR_RS10235 0.45 -0.3 2,139,251 + AZOBR_RS10235 0.88 +0.9 2,139,292 + -0.8 2,139,293 - -0.1
Or see this region's nucleotide sequence