Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS00100
Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
8,544 | + | AZOBR_RS00095 | 0.21 | -0.5 | |
8,544 | + | AZOBR_RS00095 | 0.21 | +0.1 | |
8,544 | + | AZOBR_RS00095 | 0.21 | +0.0 | |
8,703 | + | AZOBR_RS00095 | 0.34 | -0.2 | |
8,703 | + | AZOBR_RS00095 | 0.34 | -1.5 | |
8,704 | - | AZOBR_RS00095 | 0.34 | -0.0 | |
8,907 | + | AZOBR_RS00095 | 0.51 | -2.8 | |
9,546 | - | -0.1 | |||
9,602 | + | AZOBR_RS00100 | 0.16 | +0.4 | |
9,603 | - | AZOBR_RS00100 | 0.16 | +0.5 | |
9,603 | - | AZOBR_RS00100 | 0.16 | +1.4 | |
9,603 | - | AZOBR_RS00100 | 0.16 | +0.3 | |
9,603 | - | AZOBR_RS00100 | 0.16 | -1.8 | |
9,798 | - | AZOBR_RS00100 | 0.60 | +0.1 | |
9,989 | - | -0.2 | |||
10,046 | + | +0.2 | |||
10,067 | + | +0.2 | |||
10,068 | - | -0.3 | |||
10,068 | - | +0.3 | |||
10,144 | + | -0.5 | |||
10,144 | + | +0.6 | |||
10,145 | - | -0.1 | |||
10,169 | + | -0.0 | |||
10,170 | - | +0.8 | |||
10,193 | + | -0.1 | |||
10,426 | + | +0.4 | |||
10,505 | + | -0.2 | |||
10,505 | + | +0.1 | |||
10,506 | - | -0.1 | |||
10,506 | - | -1.5 | |||
10,506 | - | +0.1 | |||
10,547 | + | AZOBR_RS00105 | 0.11 | +0.4 |
Or see this region's nucleotide sequence